prot_H-paniculata_contig54684.12928.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54684.12928.1
Unique Nameprot_H-paniculata_contig54684.12928.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
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BLAST of mRNA_H-paniculata_contig54684.12928.1 vs. uniprot
Match: UPI001C79D330 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C79D330)

HSP 1 Score: 51.6 bits (122), Expect = 1.320e-5
Identity = 35/86 (40.70%), Postives = 45/86 (52.33%), Query Frame = 0 
Query:    2 EIWVCDNGATKHMPHDPGIRCNYQKCR-GRVRLADGNDLPIEGVGVLCIHFRFDSKVVLMKLAQVAHVPFLSHHLLSFGRFANSGH 86
            E WV D+GA+ H      I  NY     G+V LADG  L IEG+G + I+    S  +L K   V HVP L  +L+S G+    GH
Sbjct:  420 ESWVLDSGASFHTTAHREIMQNYVTGDFGKVYLADGEALEIEGMGDVPINLPNGSAWLLQK---VRHVPKLMRNLISVGQLDADGH 502
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BLAST of mRNA_H-paniculata_contig54684.12928.1 vs. uniprot
Match: A0A6G0WQ54_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WQ54_9STRA)

HSP 1 Score: 49.7 bits (117), Expect = 6.150e-5
Identity = 24/81 (29.63%), Postives = 42/81 (51.85%), Query Frame = 0 
Query:    5 VCDNGATKHMPHDPGIRCNYQKCRGRVRLADGNDLPIEGVGVLCIHFRFDSKVVLMKLAQVAHVPFLSHHLLSFGRFANSG 85
            + D+GAT H   D       +   G+VR+A+G+D+ IEG G + +     S +V +++  V ++P +  +L S  R    G
Sbjct:  233 ILDSGATDHYCKDISWFTTLEPFTGKVRVANGDDMNIEGRGTIELEMNTPSGIVPIRMTDVMYIPSIQFNLFSLSRVIRYG 313
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54684.12928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C79D3301.320e-540.70Uncharacterized protein n=1 Tax=Carya illinoinensi... [more]
A0A6G0WQ54_9STRA6.150e-529.63Integrase catalytic domain-containing protein n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54684contigH-paniculata_contig54684:91..348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54684.12928.1mRNA_H-paniculata_contig54684.12928.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54684 91..348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54684.12928.1 ID=prot_H-paniculata_contig54684.12928.1|Name=mRNA_H-paniculata_contig54684.12928.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
GEIWVCDNGATKHMPHDPGIRCNYQKCRGRVRLADGNDLPIEGVGVLCIH
FRFDSKVVLMKLAQVAHVPFLSHHLLSFGRFANSGH
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