prot_H-paniculata_contig5468.12927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5468.12927.1
Unique Nameprot_H-paniculata_contig5468.12927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length259
Homology
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A835YSV4_9STRA (GB1/RHD3-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSV4_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.530e-11
Identity = 46/96 (47.92%), Postives = 56/96 (58.33%), Query Frame = 0
Query:   77 AKGVAIATDTADEDDGFLTFCTDFNA-GLPEALSAAACRDYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWIDL--QLCSPP 169
            A   A +   +  D GF T C D  A  +P   S    +DY VVA+TGCQ SGKS+LLN LFG+ FPV E      P+RTT+G W+DL  Q  SPP
Sbjct:   33 AGSAAASAANSSADSGFFTMCVDLQALEVPRGAS----QDYLVVAITGCQGSGKSSLLNELFGSTFPVQEGK----PRRTTMGCWVDLAEQHPSPP 120          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: K8YT03_NANGC (Gtp-binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YT03_NANGC)

HSP 1 Score: 59.7 bits (143), Expect = 1.410e-7
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  116 YRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWIDL 163
            Y VVA+ G Q SGKSTLLNAL+GT FPVLE     + +RTT G W+D+
Sbjct:   12 YTVVAIVGPQASGKSTLLNALYGTRFPVLEVGNVGVGRRTTQGVWVDM 59          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A4D9D2G8_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2G8_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.590e-6
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  116 YRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWIDL 163
            Y VVA+ G Q SGKSTLLNAL+GT FPVLE     + +RTT G W+D+
Sbjct:  171 YTVVAIVGPQASGKSTLLNALYGTRFPVLEVGNVGVGRRTTQGVWVDM 218          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A6B2KXY6_9EUKA (Protein SEY1 homolog n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KXY6_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 1.600e-6
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  115 DYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWI 161
            DY +VAV GCQ SGKSTLLN LFGT F VL+ ++  + Q+TT+G W+
Sbjct:   40 DYYLVAVLGCQSSGKSTLLNLLFGTNFQVLDVSKTKVRQQTTLGIWL 86          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A8J5CJ72_9ASCO (Protein n=1 Tax=Yarrowia sp. B02 TaxID=2768839 RepID=A0A8J5CJ72_9ASCO)

HSP 1 Score: 58.2 bits (139), Expect = 5.560e-6
Identity = 35/71 (49.30%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   91 DGFLTFCTDFNAGLPEALSAAACRDYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWI 161
            DG   F TD +A   +     A  DY VVAV G Q +GKSTLLNALFGT F V+    +T  Q+TT G W+
Sbjct:  359 DGNKDFSTDVSAYFKKVHMDRAGLDYHVVAVFGSQSTGKSTLLNALFGTRFDVMN---ETARQQTTKGIWM 426          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: D8LCC3_ECTSI (RHD3c, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC3_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 6.450e-6
Identity = 31/48 (64.58%), Postives = 32/48 (66.67%), Query Frame = 0
Query:   94 LTFCTD-FNAGLPEALSAAACRDYRVVAVTGCQCSGKSTLLNALFGTG 140
            +T C D     L       A  DYRVVAVTGCQCSGKSTLLNALFGTG
Sbjct:    1 MTGCGDAVRQELRPCKKLGASHDYRVVAVTGCQCSGKSTLLNALFGTG 48          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A2P6NS68_9EUKA (Protein SEY1 homolog n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS68_9EUKA)

HSP 1 Score: 57.0 bits (136), Expect = 1.460e-5
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  115 DYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWI 161
            DY VVA+ GCQ SGKSTLLN LFGT FPV+E +E     +TT G W+
Sbjct:   43 DYFVVAILGCQSSGKSTLLNLLFGTTFPVMEASEGRT--QTTQGVWM 87          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A7S2ZZA6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZZA6_9RHOD)

HSP 1 Score: 55.8 bits (133), Expect = 1.900e-5
Identity = 29/46 (63.04%), Postives = 32/46 (69.57%), Query Frame = 0
Query:  115 DYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAW 160
            DY VVAV GCQ SGKSTLLN +FGT FPVL+       +RTT G W
Sbjct:   30 DYGVVAVIGCQSSGKSTLLNRVFGTDFPVLD-VNKAGRRRTTTGVW 74          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A098VRI2_9MICR (Protein SEY1 n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VRI2_9MICR)

HSP 1 Score: 55.1 bits (131), Expect = 5.710e-5
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  115 DYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWI 161
            DY+V+AV G Q SGKSTLLNALFGT FPV+   ++  P    +G W+
Sbjct:  187 DYKVIAVFGAQSSGKSTLLNALFGTAFPVMR--DEVFPHPLVLGIWL 231          
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Match: A0A4P9XLT3_9FUNG (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XLT3_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 6.120e-5
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  115 DYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDTLPQRTTVGAWI 161
            +Y VVAV G Q SGKSTLLNALFGT FPV   +ED   ++TT G W+
Sbjct:   59 NYNVVAVLGRQGSGKSTLLNALFGTQFPV---SEDISQRQTTKGIWM 102          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5468.12927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YSV4_9STRA1.530e-1147.92GB1/RHD3-type G domain-containing protein n=1 Tax=... [more]
K8YT03_NANGC1.410e-760.42Gtp-binding protein (Fragment) n=1 Tax=Nannochloro... [more]
A0A4D9D2G8_9STRA1.590e-660.42GB1/RHD3-type G domain-containing protein n=2 Tax=... [more]
A0A6B2KXY6_9EUKA1.600e-659.57Protein SEY1 homolog n=1 Tax=Arcella intermedia Ta... [more]
A0A8J5CJ72_9ASCO5.560e-649.30Protein n=1 Tax=Yarrowia sp. B02 TaxID=2768839 Rep... [more]
D8LCC3_ECTSI6.450e-664.58RHD3c, RHD3/Sey1 family GTPase involved in the ER-... [more]
A0A2P6NS68_9EUKA1.460e-561.70Protein SEY1 homolog n=1 Tax=Planoprotostelium fun... [more]
A0A7S2ZZA6_9RHOD1.900e-563.04Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A098VRI2_9MICR5.710e-555.32Protein SEY1 n=1 Tax=Mitosporidium daphniae TaxID=... [more]
A0A4P9XLT3_9FUNG6.120e-561.70P-loop containing nucleoside triphosphate hydrolas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 86..179
e-value: 6.9E-7
score: 30.6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..259
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..35
score: 0.609
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 123..161
e-value: 8.4E-7
score: 27.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 89..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5468contigH-paniculata_contig5468:4449..7379 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5468.12927.1mRNA_H-paniculata_contig5468.12927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5468 4449..7380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5468.12927.1 ID=prot_H-paniculata_contig5468.12927.1|Name=mRNA_H-paniculata_contig5468.12927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp
MNCRQQQTGCYRVGVVVVNFRRALCVLSFLASVLASSNNGHQPPAAAATA
VAAAHIFNYDDGKVADHGNGEQWTNAAKGVAIATDTADEDDGFLTFCTDF
NAGLPEALSAAACRDYRVVAVTGCQCSGKSTLLNALFGTGFPVLERAEDT
LPQRTTVGAWIDLQLCSPPRTREKSSNTRRGSAAAAAGKRRVASSKQRRA
HRTSSSITVAATPSRWSPAEIEGDRVVYLSSATESAAVVVESGEVGGGDE
GGVSIHVSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1
IPR027417P-loop_NTPase