prot_H-paniculata_contig54677.12926.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54677.12926.1
Unique Nameprot_H-paniculata_contig54677.12926.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.780e-28
Identity = 69/181 (38.12%), Postives = 99/181 (54.70%), Query Frame = 0
Query:    1 MNSHFHAFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKD----TYRMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGAS----------------------IFTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGL 155
            ++  F+ FRR + GDPPA+V P+ V +   A+  +AR R  + DK +WL      L  +G+V+ N QA ++S  M  PK+     TYR V D+RAVN  +  S  PM +LE   + ++ A+                      IFTM+   G+Y+P RVP+GVLNATSY+QGTM  +L  L
Sbjct:  626 VDRRFNVFRRGVRGDPPANVPPMTVKLKTGAKPVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL 806          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.900e-27
Identity = 76/180 (42.22%), Postives = 99/180 (55.00%), Query Frame = 0
Query:    1 MNSHFHAFRRALS-GDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTYRMVADYRAVNSLV--APSAMPMLNLEEIGRGMAGAS----------------------IFTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGL 155
            ++  ++AFRR L  GDPPA+VEPL V +   AR  +ARPR  +  K  WL       A +G+VF N QA ++S AMA PKK  YR+V+D+RA N  V   P  MP  N E     ++ A                       IFT+ T  G+YTP RVP+G+LNATSYFQ T+  +L GL
Sbjct:  734 ISERWNAFRRGLRHGDPPANVEPLRVTLKPGARPVKARPRVYNPIKTAWL-------AGLGLVFLNMQAVWASAAMATPKKGGYRLVSDFRAANKQVEKVPGVMP--NPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGL 904          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 9.590e-25
Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = 0
Query:    1 MNSHFHAFRRALS-GDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTYRMVADYRAVNSLV--APSAMPM--LNLEEIGRGMAGAS------------------IFTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGL 155
            +   ++AFR  +  GDPPA+VEPL V +   A   +ARPR  +  K  WL         +G+VF N QA  +S AMA PKK  YR+++D+RA N+ V   P  MP    ++ +        S                  IFT+ T +G++TP RVP+G+LNATSYFQ T+  +L GL
Sbjct:  508 IRERWNAFRPGMRPGDPPANVEPLRVTLKPGALPVKARPRTYNPIKTAWLAGCMASPVVLGLVFLNMQAVSASAAMATPKKGGYRLLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQGILNATSYFQATLSRILEGL 685          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6G0NWQ3_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0NWQ3_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.870e-22
Identity = 60/179 (33.52%), Postives = 86/179 (48.04%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASI----------------------FTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V PL V V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        P+  LE +   + GA +                      FT +T +G+YTPTRVP G  +A +Y QG + ++  GLL
Sbjct:   32 SFRLEFESDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPIPVLEVVLGALEGAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLL 210          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6A3YWA9_9STRA (Reverse transcriptase domain-containing protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YWA9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 7.630e-21
Identity = 60/179 (33.52%), Postives = 86/179 (48.04%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASI----------------------FTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V PL V V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        P+  LE +   + GA +                      FT +T +G+YTPTRVP G  +A +Y QG + ++  GLL
Sbjct:  505 SFRLEFESDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAYLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPIPVLEVVLGALEGAKVVFAMDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGGLL 683          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.130e-20
Identity = 60/179 (33.52%), Postives = 85/179 (47.49%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASI----------------------FTMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V PL V V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PM  LE +   + GA +                      FT +T +G+YTPTRVP G  +A +Y QG + ++   LL
Sbjct:   67 SFRLEFGCDPPVKVAPLQVRVTVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRGVNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLL 245          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6A4AUS0_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4AUS0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 9.470e-20
Identity = 57/178 (32.02%), Postives = 86/178 (48.31%), Query Frame = 0
Query:    8 FRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASIF----------------------TMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            FR     DPP  V P+ V +  DAR  RA+PRP S +   +LD+H   L   G+V+ N ++R++S    V K++         RM  D R+VN    P + PM  L+ +   + GA +F                      + VT +G+YTPTRVP G  +A +Y QG + ++   L+
Sbjct:   22 FRLEFGNDPPVRVTPMQVRLKDDARPVRAQPRPYSPNDRAFLDRHTAALLAHGLVYKNHRSRWASAPRIVRKREQDVDPTADPRMTIDTRSVNERTEPMSWPMPVLDVVLGELEGARVFFVLDWFRGYWQLPLHPDSQELYSFVTHRGIYTPTRVPMGATDAVAYCQGVVDEIFGDLI 199          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6A3H5Q5_9STRA (Peptidase A2 domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3H5Q5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.830e-19
Identity = 60/179 (33.52%), Postives = 85/179 (47.49%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASIF----------------------TMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V P+ VH+ A A   RA+PR  S    E+LD+H   L   G+V+ N ++R++S    V KK+         RM  D R+VN    P   PM  L+ +   + GA  F                      + VT +G+YTPTRVP GV +A +Y QG + ++   LL
Sbjct:  360 SFRVDFGNDPPVRVAPMQVHLKAGAEPVRAQPRRYSPTDREFLDRHTRALLDHGLVYKNHRSRWASAPRIVRKKEQDSDPTADPRMTIDTRSVNEKTEPMPWPMPVLDVVIGELEGARFFFVLDWFRGYWQLPLHPDSQKLYSFVTHRGIYTPTRVPMGVTDAVAYCQGVVEEIFGDLL 538          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6A3VFD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VFD8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.180e-19
Identity = 59/179 (32.96%), Postives = 84/179 (46.93%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASIF----------------------TMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V PL V V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PM  LE +   + GA +F                      T +T +G+YTPTRVP G  +A +Y QG + ++    L
Sbjct:  469 SFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRL 647          
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.410e-19
Identity = 59/179 (32.96%), Postives = 84/179 (46.93%), Query Frame = 0
Query:    7 AFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLDKHFTKLAQVGMVFANPQARFSSVAMAVPKKDTY-------RMVADYRAVNSLVAPSAMPMLNLEEIGRGMAGASIF----------------------TMVTAKGVYTPTRVPEGVLNATSYFQGTMGDVLAGLL 156
            +FR     DPP  V PL V V  +A+  +A+PR  S D   +LD+H  KL + G+VF N ++R++S    V KK+         RM  D R VN        PM  LE +   + GA +F                      T +T +G+YTPTRVP G  +A +Y QG + ++    L
Sbjct:  334 SFRLEFGCDPPVKVAPLQVRVKVNAQPTKAQPRRYSPDDRAFLDRHTAKLLEFGLVFLNHRSRWASAPRIVRKKEQDSDPSADPRMTIDTRGVNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRL 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54677.12926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE1.780e-2838.12Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE2.900e-2742.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK9_9PHAE9.590e-2538.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0NWQ3_9STRA8.870e-2233.52Reverse transcriptase domain-containing protein n=... [more]
A0A6A3YWA9_9STRA7.630e-2133.52Reverse transcriptase domain-containing protein n=... [more]
A0A6A3GM82_9STRA4.130e-2033.52Reverse transcriptase domain-containing protein (F... [more]
A0A6A4AUS0_9STRA9.470e-2032.02Reverse transcriptase domain-containing protein (F... [more]
A0A6A3H5Q5_9STRA3.830e-1933.52Peptidase A2 domain-containing protein n=2 Tax=Phy... [more]
A0A6A3VFD8_9STRA4.180e-1932.96Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6G0MLJ8_9STRA4.410e-1932.96Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 18..139
e-value: 2.3E-8
score: 36.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 4..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54677contigH-paniculata_contig54677:59..598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54677.12926.1mRNA_H-paniculata_contig54677.12926.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54677 5..748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54677.12926.1 ID=prot_H-paniculata_contig54677.12926.1|Name=mRNA_H-paniculata_contig54677.12926.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MNSHFHAFRRALSGDPPADVEPLWVHVPADARAGRARPRPMSRDKAEWLD
KHFTKLAQVGMVFANPQARFSSVAMAVPKKDTYRMVADYRAVNSLVAPSA
MPMLNLEEIGRGMAGASIFTMVTAKGVYTPTRVPEGVLNATSYFQGTMGD
VLAGLLE*
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