prot_H-paniculata_contig5464.12922.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5464.12922.1
Unique Nameprot_H-paniculata_contig5464.12922.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A369JJ40_HYPMA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369JJ40_HYPMA)

HSP 1 Score: 154 bits (389), Expect = 1.710e-39
Identity = 89/225 (39.56%), Postives = 132/225 (58.67%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            + DLG  S +LGI++RR+  + +I +SQ SYI  I+ R  F++ +   I ++  V++   +   K        +  YR  VGSLMY + GTRPDIA+A   AA+  ++P    + A KRIF YL    DL++ +G ++ G  LEGFVD D ++++       YVF ++GGA+SW S+KQ+L T S+TEAEYVAA  A    ++LR L G +       TTL  D+
Sbjct: 1282 LTDLGPASWLLGIKIRRNLKERTIALSQHSYIESIITRYNFNDLKPSAIPMDPNVQLSRAQCPTKLEDIARMRNVPYREAVGSLMYAAMGTRPDIAFATSTAAQFSDNPGWVHWEAVKRIFRYLLGTKDLELVYGAEQKG--LEGFVDADGASQDHRRAISGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAAMHAAKEAMWLRRLIGELFRPLSEPTTLFSDS 1504          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A409WUQ4_9AGAR (Uncharacterized protein n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WUQ4_9AGAR)

HSP 1 Score: 152 bits (383), Expect = 1.090e-38
Identity = 87/224 (38.84%), Postives = 131/224 (58.48%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCR-GSTTLLEDN 218
            D+G L  +LGIEV R+ S  ++ +SQ SYI  I++R GF++ + V + ++  V++   +S     +  +  +  YR  +GSLMY + GTRPDIAYAV   +R   +P    + A KRIF YL    DL +++G +R+   L GF D D S  E       Y F +NGGA+SW +++Q++ + S+TE+EYVAA  A    ++LR L   I FG +  + TL  DN
Sbjct: 1267 DMGELHWILGIEVTRNRSLRTLHLSQRSYIHSIIRRYGFEDSKPVSMPMDPNVRLSTTQSPQTTQQYAAMRNIPYREAIGSLMYAALGTRPDIAYAVQAVSRFSTNPGTTHWEAVKRIFRYLKGTKDLWLSYGSRRDDGTLVGFTDADGSMAEDRHAITGYAFIINGGAVSWSAKRQEIISLSTTESEYVAATHAAKEALWLRSLLDQI-FGTKLDAITLFSDN 1489          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A401H4R8_9APHY (Uncharacterized protein n=2 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H4R8_9APHY)

HSP 1 Score: 150 bits (379), Expect = 3.740e-38
Identity = 84/225 (37.33%), Postives = 126/225 (56.00%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            + DLG +  +LG  V RD +  ++ +SQ SYI  I++R GF++ + +   ++    + + +S    ++  +     YR  VGSLMY S GTRPDI YAV   +R  ++P R  + A KR+F YLS   DL +T+G +  G  L G+ D D S  E       Y F ++GGA+SW S++Q++   S+TEAEYVAA  A    ++LR L G +      + TL  DN
Sbjct: 1260 ISDLGEIHWILGFAVERDRTARTLALSQTSYINSIIQRFGFEDLKPLTTPMDPNTTLSSAQSPQTTAEAAAMRDIPYREAVGSLMYASLGTRPDITYAVSFLSRFSDNPGRAHWEAVKRVFRYLSGTKDLKLTYGAQ--GLDLVGYTDADGSMHEDRKAISGYAFLIDGGAVSWSSKRQEIIALSTTEAEYVAATHAAKEALWLRSLIGQVFQPFSEAVTLYSDN 1482          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A146H7K8_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H7K8_MYCCL)

HSP 1 Score: 145 bits (366), Expect = 4.940e-38
Identity = 85/228 (37.28%), Postives = 125/228 (54.82%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGV--PILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDW--------STKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            MKD+G   +++GIEV RD S G++T+SQ  YI  +L R GF     V  P++ +   K+  L   D P    S  + EY+SM+G LMY +  TRPDIAYAV + ++   +P  E  +ACKR+F YLS   +  + +G +R+G   EG+ D D+        S   Y + L G A +W S+KQ     S+TEAE+ +  +A    ++ R L   IG+    +T L  DN
Sbjct:  112 MKDMGEPRKIIGIEVTRDRSAGTVTLSQRHYIESLLDRYGFSNLNAVSTPLVPDANTKMRQLPK-DAPPAAPSVRA-EYQSMIGGLMYAAICTRPDIAYAVGRLSQFAANPGPEHQAACKRVFRYLSGTRNYGLVYGPQRDGVVFEGYCDADYAANLDDRKSISGYAYMLAGAAFAWSSKKQTTVATSTTEAEFTSLAQAARFAMWCRNLFAGIGYSQDDATVLYGDN 337          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 149 bits (377), Expect = 6.930e-38
Identity = 87/225 (38.67%), Postives = 128/225 (56.89%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            + DLG +S VLGI+V RD    ++++SQ SYI  I+ R  FD+ + +   ++  +++   +  +            YR  +G+LMY + GTRPDIA+AV   A+  E+P    + A KR+F YL     L + +GG ++G  LEGFVD D S++E       YVF ++GGA+SW S+KQ+L T S+ E+EYVAA  A    I+LR   G +       TTL  DN
Sbjct: 1235 LTDLGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDG--LEGFVDADGSSQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRFIGEVFQPLSEPTTLHGDN 1457          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU)

HSP 1 Score: 144 bits (363), Expect = 2.440e-37
Identity = 84/225 (37.33%), Postives = 128/225 (56.89%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            + DLG +S +LGI+V RD S  ++ +SQ +YI  I+ R  FD+ + +   ++   ++   +  +  +         Y+  +GSLMY + GTRPDIA+AV   A+  ++P    + A KR+F YL     L + +GG + G  LEG+VD D +++E       YVF ++GGAISW S+KQ+L T S+ E+EYVAA  A    I+LR L G +       TTL  D+
Sbjct:  149 LTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRG--LEGYVDADGASQEHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDS 371          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A4S4K468_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4K468_9APHY)

HSP 1 Score: 144 bits (364), Expect = 2.480e-37
Identity = 83/225 (36.89%), Postives = 130/225 (57.78%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            + DLG +S +LGI+V RD    ++++SQ +YI  IL R  F + +   I ++  +++   +     +         YR  +GSLMY + GTRPDI++A+   A+  ++P    + A KR+F YL    +L + +GG + G  LEG+VD D +++E       YVF ++GGA+SW S+KQ+L T S+TEAEYVAA  A    +++R L G +     G TTL  D+
Sbjct:  171 LTDLGEVSWLLGIKVARDREARTLSLSQHAYIDSILARFNFTDLKPSSIPMDPNLQLTKSQCPTSLADIARMRKIPYREAIGSLMYAAVGTRPDISFAISTLAQFSQNPGWTHWEAVKRVFRYLLGTKNLVLQYGGVQRG--LEGYVDADGASQEHRHAITGYVFLVDGGAVSWSSKKQELVTLSTTEAEYVAATHAAKEAMWIRRLLGEVFRPLDGPTTLYSDS 393          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A060S8R4_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S8R4_PYCCI)

HSP 1 Score: 140 bits (354), Expect = 2.600e-37
Identity = 80/225 (35.56%), Postives = 124/225 (55.11%), Query Frame = 0
Query:    1 MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            M DLG +S +LGI++ RD   G+ ++SQ +YI  +L R  F + + +   ++    +   +  + P++        YR  +G LMY + GT+PDI +AV   A+  ++P +  + A KR+F YL     L   +GG++    LEGFVD D +T+E       YVF ++GGA+SW S+KQ+L T S+ E+EYVA   A    ++LR   G +       TTL  DN
Sbjct:    1 MTDLGPVSWLLGIKISRDLEAGTFSLSQHAYIDALLARFNFTDLKPMSTPMDPHQLLSKTQCPESPAEVARMRRVPYREAIGVLMYAALGTQPDIVFAVSTLAQFAQNPGQPHWDAVKRVFRYLLGTRTLSRVYGGEKRE--LEGFVDADGATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVATTHAAKEAVWLRRFIGEVFGPLAEPTTLYNDN 223          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A409X4K8_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409X4K8_9AGAR)

HSP 1 Score: 147 bits (371), Expect = 3.970e-37
Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            DLG  + +LGI++ RD +  +I++SQ +YI  I+ R  FD+ +   I ++   ++   +     + +    +  YR  VGSLMY S GTRPDI +A    A+ M++P    + A K+IF YL    +L++ +GG+     L GFVD D +++E       YVF ++GGA+SW S+KQ+L T S+TEAEYVAA  A    ++LR L   I       TTL  DN
Sbjct:  605 DLGPCTWLLGIKLTRDLTQRTISLSQHAYIESIITRFNFDDLKPCAIPIDPNQQLSRSQCPTSLADKARMKNVPYREAVGSLMYASMGTRPDITFATSTVAQFMDNPGWVHWEAVKKIFRYLKGTKELELVYGGETRD--LVGFVDADGASQEHRHAISGYVFIVDGGAVSWASKKQELVTLSTTEAEYVAATHAAKEAVWLRRLISEILSPISEPTTLYGDN 825          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A067SDP3_GALM3 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067SDP3_GALM3)

HSP 1 Score: 143 bits (361), Expect = 1.640e-36
Identity = 87/223 (39.01%), Postives = 124/223 (55.61%), Query Frame = 0
Query:    3 DLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN 218
            DLG L  +LGIEVRR   +  I +SQ SY+  I++R GF++ + V I ++  V++ + +S     +        Y   VGSLMY S GTRPDI YAV   +R    P    + A KRIF YL+   +L +++GG+R    L GF D D +  E       Y F L+GGAISW +++Q++ + S+TE+EYVAA  A    ++LR L   +       TTL  DN
Sbjct:  240 DLGELHWILGIEVRRIREERRILLSQRSYLESIIRRYGFEDLKPVSIPMDPNVRLTSDQSPSTTQEFARMRDIPYHEAVGSLMYASLGTRPDITYAVQAVSRFASKPGIAHWDAVKRIFRYLNGSKNLWLSYGGQRKE--LVGFADADGNMAEDRHAISGYAFILHGGAISWTTKRQEIISLSTTESEYVAATHAAKEGLWLRSLITQLFATKLDPTTLFSDN 460          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A369JJ40_HYPMA1.710e-3939.56Retrovirus-related Pol polyprotein from transposon... [more]
A0A409WUQ4_9AGAR1.090e-3838.84Uncharacterized protein n=1 Tax=Panaeolus cyanesce... [more]
A0A401H4R8_9APHY3.740e-3837.33Uncharacterized protein n=2 Tax=Sparassis crispa T... [more]
A0A146H7K8_MYCCL4.940e-3837.28Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8SFR3_9APHY6.930e-3838.67Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A1M2VSW8_TRAPU2.440e-3737.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A4S4K468_9APHY2.480e-3736.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S8R4_PYCCI2.600e-3735.56Uncharacterized protein n=1 Tax=Pycnoporus cinnaba... [more]
A0A409X4K8_9AGAR3.970e-3738.12Integrase catalytic domain-containing protein (Fra... [more]
A0A067SDP3_GALM31.640e-3639.01Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 73..217
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 73..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5464contigH-paniculata_contig5464:12165..12905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5464.12922.1mRNA_H-paniculata_contig5464.12922.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5464 12069..13367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5464.12922.1 ID=prot_H-paniculata_contig5464.12922.1|Name=mRNA_H-paniculata_contig5464.12922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPIL
VEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVH
QAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTD
WSTKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLREL
PGSIGFGCRGSTTLLEDN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like