mRNA_H-paniculata_contig5464.12922.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5464.12922.1
Unique NamemRNA_H-paniculata_contig5464.12922.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 270 bits (690), Expect = 3.950e-77
Identity = 156/414 (37.68%), Postives = 237/414 (57.25%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFG--CRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G +QV G DF+ET AP+A++ ++R I +LAA +D+EL  MDV  A LN  +EEE++++ PP  +   ++   V RL++ LYGLK SGR ++  +   + ++GL  S +  C+++ R++     L +A+ VDD  I G +  V  FK  I   F M DLG +  +LGIEVRRD    ++++SQ +YI  IL R    + + +   ++    +   +    P + +   +  YR  +GSLMY + GTRPDIAYAV   ++ M++P R  + A KR+F YL+   +  +TFG   +G  +EGF D DW + E       YVF L+GGA+SW ++KQ +   SSTEAEY+A   A    ++LR L   +      R    L  DN  A  ++K  + H RTKHI +R+H IRE +  G
Sbjct:  993 GFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADWGSAEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENG 1403          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM)

HSP 1 Score: 257 bits (657), Expect = 5.650e-77
Identity = 148/413 (35.84%), Postives = 229/413 (55.45%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRR-EKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G SQ+ G D+++T AP+A++ ++R + +LAA  D+EL  MDV  A LN  +EEE+F+K PP   +  Q+   V  L K +YGLK +GR W   L    + +G   S++   ++F     GE  + VAV VDD+ I     ++++  K  +   F M DLG +  +LG+E++RD    +I++ Q +YI  IL R    + + +   ++    +   +S   P +     +  YR  +GSLMY + GTRPD++YAV   ++ M++P    + A KR+  YL    +  +T+GG  N  G+EGF D DW + +       YVF ++GGA+SW S+KQ +   SSTEAEYVA   A    ++ R   G I       TTL  DN  A  ++K +  H RTKHI +R+H IR+ + +G
Sbjct:  101 GFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQE-QKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGD-NANGMEGFSDADWGSSDHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERG 510          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 267 bits (683), Expect = 4.360e-76
Identity = 165/418 (39.47%), Postives = 229/418 (54.78%), Query Frame = 1
Query:    1 GISQVEGEDF--SETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDW--------STKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLREL------PGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWI 1206
            G SQV G D+   ET AP++R+ ++RTI +LAA HD+EL  MDV +A LN  +EE V++  PP  S   Q    V RL+K LYGLK +GR W   L   ++ +G         +++ R+  GE+ + VA  VDD+ I G  + V  F  +I Q F M DLG+L  +LGIEVRRDC   +I ISQ SYI   + R   ++   + I ++    +   +S   P + +      YR  VGSLMY + GTRPD+ +AV   ++ M++P R  + A KR+  YL    +L + +G   NG  L  F D DW        S   YVF L+GGAISW S+KQ +   SSTEAEY+A   A    I+LR +      P    F  R    L  DN  A  ++K ++ H RTKHI +R+H IRE +
Sbjct: 1882 GFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFSMPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVLRYLKGTRELWLVYGDDNNG--LHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLADVLHPELSSFPVR----LCSDNRSAIALAKDNAFHPRTKHIDIRYHFIREAV 2290          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 266 bits (680), Expect = 9.740e-76
Identity = 169/418 (40.43%), Postives = 230/418 (55.02%), Query Frame = 1
Query:    1 GISQVEGEDF--SETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDW--------STKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLREL------PGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWI 1206
            G SQV G D+   ET AP++R+ ++RTI SLAA HD+EL  MDV +A LN  +EE V+++LPP  +   Q    V RL+K LYGLK +GR W   L   +  +G         +++ R+  GE+ + VA  VDD+ I G  + V  F  +I Q F M DLG L  +LGIEVRRD    +I ISQ SYI  I+ R   DE   + I ++    +   +S   P + +      YR  VGSLMY + GTRPDI +AV   ++ M++P R  + A KR+  YL    +L + +G   N  GL G+ D DW        S   YVF L+GGAISW S+KQ +   SSTEAEY+A   A    I+LR +      P    F  R    L  DN  A  ++K ++ H RTKHI +R+H IRE +
Sbjct: 1099 GFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVR----LHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAV 1507          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 256 bits (655), Expect = 2.810e-75
Identity = 151/411 (36.74%), Postives = 229/411 (55.72%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRRE-KVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDW--------STKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWI 1206
            G SQ  G+D+ ET +P+AR  ++RT+ +LAA+H  +L  MDV  A LN  ++EEV++K         ++   V RLR+ +YGLK S R WN++LD  +  +G   +T   C+Y  +++GGE  + +AVYVDD+++ G+ + K+ E K  + + F+MKD+G L   LG++V        I I Q++Y + +L+R G +  +     V    K   L+ A   S+R   +   Y+  VG L+Y ST TRPDIAYAV   AR   DP  E + A KRI  YL+   D+ + + G +      G+ D DW        ST  YVF ++  AISWRS+KQ     S+ EAEY+A   A    ++L++L   +     G   +LEDN  A  ++K +  H R KHI +++H IRE +
Sbjct:   53 GFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKE-HLVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTK---LKKAADDSQRV--DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHV 455          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU)

HSP 1 Score: 249 bits (637), Expect = 3.230e-75
Identity = 146/409 (35.70%), Postives = 233/409 (56.97%), Query Frame = 1
Query:   13 VEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKV-AEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            V G D+ ET AP+A++ + R I ++AA + +  E+ D ++A LN+ ++EEV+++ PP+   + +   +V +L K LYGLK  GR W   L   +  +G   +     ++F RD  G   + +A++VDD +I G   ++ AE+K  +   +++ DLG +S +LGI+V RD S  ++ +SQ +YI  I+ R  FD+ + +   ++   ++   +  +  +         Y+  +GSLMY + GTRPDIA+AV   A+  ++P    + A KR+F YL     L + +GG + G  LEG+VD D +++E       YVF ++GGAISW S+KQ+L T S+ E+EYVAA  A    I+LR L G +       TTL  D+  A  ++   S H RTKHI +R+H IR  I  G
Sbjct:    1 VYGVDYYETFAPVAKLASFRLILAIAARNGWSAETFDFNSAYLNSKLDEEVYLEQPPDHEFADRR-KYVLKLLKALYGLKQGGRKWYETLSAALADLGFTRAEADYGVFFKRD--GTHLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGGGQRG--LEGYVDADGASQEHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIRYSIDAG 404          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A2G8SFR3_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8SFR3_9APHY)

HSP 1 Score: 265 bits (676), Expect = 3.300e-75
Identity = 154/413 (37.29%), Postives = 236/413 (57.14%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAE-FKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G +QV G D++ET AP+AR+ ++RTIF++A+ + + ++  D  +A LN+ ++E+V+++ PP    + +   FV +L+K LYGLK  GR W   L   +  +G         ++F R+DG    L  AV+VDD II G    +   +K  +   +++ DLG +S VLGI+V RD    ++++SQ SYI  I+ R  FD+ + +   ++  +++   +  +            YR  +G+LMY + GTRPDIA+AV   A+  E+P    + A KR+F YL     L + +GG ++G  LEGFVD D S++E       YVF ++GGA+SW S+KQ+L T S+ E+EYVAA  A    I+LR   G +       TTL  DN  A  ++K  S H RTKHI +R+H IR  I  G
Sbjct: 1083 GFTQVHGVDYTETFAPVARLSSIRTIFAIASRNGWPIDVFDFSSAFLNSTLDEDVYLEQPPHHEFADRG-KFVLKLKKALYGLKQGGRKWYETLCAALADLGFGRVEADHGIFFKREDGHLVVL--AVHVDDCIITGDSGSLNNSYKTQLSTRYKLTDLGPVSWVLGIKVTRDLEARTLSLSQHSYIDSIITRFNFDDLKPISTPMDPHLQLSKTQCPESALDVARMKRVPYREAIGALMYAAMGTRPDIAFAVSTLAQYSENPGWTHWEAVKRVFRYLVGTRHLSLVYGGGKDG--LEGFVDADGSSQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRFIGEVFQPLSEPTTLHGDNQAAIALTKDGSYHARTKHIDIRYHFIRYSIEAG 1490          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 254 bits (648), Expect = 7.680e-75
Identity = 147/414 (35.51%), Postives = 233/414 (56.28%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFG--CRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G +QV G DF+ET AP+A++ ++  I +LAA +D+EL  MDV  A LN  +EEE++++ PP  +   ++   V RL++ LYGLK SGR ++  +   + ++GL  S +  C+++ R++     L +A+ VDD  I G +  V  FK  I   F+M DLG +  +LGIEV+RD    ++++SQ  YI  IL R    + + +   ++    +   +    P + +   +  YR ++GSLMY + GTRPDIAYA+   ++ M++P +  + A KR+F YL+   +  +TFG   +G  +EGF D DW + E       YVF L+G A+SW ++KQ +   SSTEAEY+A   A    ++L  L   +      R    L  DN     ++K  + H RTKHI +R+H I + +  G
Sbjct:  183 GFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADWGSAEHRHSISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTVENG 593          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A409X4K8_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Gymnopilus dilepis TaxID=231916 RepID=A0A409X4K8_9AGAR)

HSP 1 Score: 258 bits (659), Expect = 1.970e-74
Identity = 153/414 (36.96%), Postives = 233/414 (56.28%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPV-EEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRR-EKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFGCRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G +QV G D+  T AP+AR+ T R + +LA  + + +ES+D D+A LNAP+ ++EV     P+  + +    +V RL K LYGLK   RNW   L   +  +G         ++   +  GE  L + V+VDD ++ G   EK+++FK +I Q +++ DLG  + +LGI++ RD +  +I++SQ +YI  I+ R  FD+ +   I ++   ++   +     + +    +  YR  VGSLMY S GTRPDI +A    A+ M++P    + A K+IF YL    +L++ +GG+     L GFVD D +++E       YVF ++GGA+SW S+KQ+L T S+TEAEYVAA  A    ++LR L   I       TTL  DN  A  ++ G   H RTKHI +R+H IR  I  G
Sbjct:  449 GFTQVYGIDYDATYAPVARLSTFRYVIALANRNGWPIESIDFDSAFLNAPLGDDEVIYLEQPKGYAKADPKVYVFRLEKSLYGLKQGARNWYAALRKALEELGFKRMEADHGVFVKNE--GECLLILVVHVDDCLLTGNSMEKISKFKRDINQKYKITDLGPCTWLLGIKLTRDLTQRTISLSQHAYIESIITRFNFDDLKPCAIPIDPNQQLSRSQCPTSLADKARMKNVPYREAVGSLMYASMGTRPDITFATSTVAQFMDNPGWVHWEAVKKIFRYLKGTKELELVYGGETRD--LVGFVDADGASQEHRHAISGYVFIVDGGAVSWASKKQELVTLSTTEAEYVAATHAAKEAVWLRRLISEILSPISEPTTLYGDNQSAIALAHGGQYHARTKHIDIRYHFIRYIIEAG 858          
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Match: A0A401H6Z2_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H6Z2_9APHY)

HSP 1 Score: 260 bits (664), Expect = 8.220e-74
Identity = 152/414 (36.71%), Postives = 232/414 (56.04%), Query Frame = 1
Query:    1 GISQVEGEDFSETSAPLARMLTLRTIFSLAAEHDFELESMDVDAACLNAPVEEEVFVKLPPEVSSSSQDIPFVRRLRKCLYGLK*SGRNWNNILDDVIVAIGLNHSTIH*CLYFSRDDGGETELRVAVYVDDVIIVGRREKVAEFKHNIGQGFRMKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPILVEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVHQAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTDWSTKE-------YVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLRELPGSIGFG--CRGSTTLLEDN*LASNISKGSSAHCRTKHIGVRWHGIREWIRKG 1215
            G +QV G DF+ET AP+A++ ++R I +LAA +D+EL  MDV    LN  +EEE+++  PP  +   ++   V RL++ LYGLK SGR ++  +   + ++GL  S +  C+++ R++     L +A+ VDD  I G +  V  FK  I   F M DLG +  +LGIEVRRD    ++++SQ +YI  IL R    + + +   ++    +   +    P + +   +  YR  +GSLMY + GTRPDIAYAV   ++ M++P R  + A KR+F YL+   +  +TFG   +G  +EGF D DW + E       YVF L+G A+SW ++KQ +   SSTEAEY+A   A    ++L  L   +      R    L  DN  A  ++K  + H  TKHI +R+H IRE +  G
Sbjct:  816 GFTQVPGIDFNETFAPVAKLASIRLILTLAAHYDWELHQMDVKGVYLNGDLEEEIYMWQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCIFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISMHFEMSDLGEMHWILGIEVRRDRDARTLSLSQCAYIDMILARFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMKNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDG--VEGFSDADWGSAEHRHSISRYVFLLDGDAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHAHTKHIDIRFHFIRETVENG 1226          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5464.12922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GN13_9APHY3.950e-7737.68Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A4Y9ZVS1_9AGAM5.650e-7735.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RW53_9APHY4.360e-7639.47Integrase catalytic domain-containing protein n=1 ... [more]
A0A2G8RWY5_9APHY9.740e-7640.43Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A7D9KES8_PARCT2.810e-7536.74Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1M2VSW8_TRAPU3.230e-7535.70Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G8SFR3_9APHY3.300e-7537.29Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A401GP19_9APHY7.680e-7535.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409X4K8_9AGAR1.970e-7436.96Integrase catalytic domain-containing protein (Fra... [more]
A0A401H6Z2_9APHY8.220e-7436.71Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5464contigH-paniculata_contig5464:12069..13367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score135.6
Seed ortholog evalue2.8e-29
Seed eggNOG ortholog4081.Solyc12g009540.1.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,44UC5@71274,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelasterids
Best eggNOG OGNA|NA|NA
Exons3
Model size1215
Cds size657
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5464.12922.1prot_H-paniculata_contig5464.12922.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5464 12165..12905 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930566.3091307-UTR-H-paniculata_contig5464:12068..121641622930566.3091307-UTR-H-paniculata_contig5464:12068..12164Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5464 12069..12164 -
1691481351.1241233-UTR-H-paniculata_contig5464:12068..121641691481351.1241233-UTR-H-paniculata_contig5464:12068..12164Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5464 12069..12164 -
1622930566.3659503-UTR-H-paniculata_contig5464:12905..133671622930566.3659503-UTR-H-paniculata_contig5464:12905..13367Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5464 12906..13367 -
1691481351.1630652-UTR-H-paniculata_contig5464:12905..133671691481351.1630652-UTR-H-paniculata_contig5464:12905..13367Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5464 12906..13367 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930566.325664-CDS-H-paniculata_contig5464:12164..123681622930566.325664-CDS-H-paniculata_contig5464:12164..12368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12165..12368 -
1691481351.1362567-CDS-H-paniculata_contig5464:12164..123681691481351.1362567-CDS-H-paniculata_contig5464:12164..12368Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12165..12368 -
1622930566.3376944-CDS-H-paniculata_contig5464:12392..126361622930566.3376944-CDS-H-paniculata_contig5464:12392..12636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12393..12636 -
1691481351.144996-CDS-H-paniculata_contig5464:12392..126361691481351.144996-CDS-H-paniculata_contig5464:12392..12636Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12393..12636 -
1622930566.352447-CDS-H-paniculata_contig5464:12696..129051622930566.352447-CDS-H-paniculata_contig5464:12696..12905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12697..12905 -
1691481351.1538208-CDS-H-paniculata_contig5464:12696..129051691481351.1538208-CDS-H-paniculata_contig5464:12696..12905Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5464 12697..12905 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5464.12922.1

>prot_H-paniculata_contig5464.12922.1 ID=prot_H-paniculata_contig5464.12922.1|Name=mRNA_H-paniculata_contig5464.12922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MKDLGSLSRVLGIEVRRDCSDGSITISQDSYIREILKRCGFDEFRGVPIL
VEGKVKILALESADKPSKRKSGNSTEYRSMVGSLMYTSTGTRPDIAYAVH
QAARRMEDPCREDFSACKRIFCYLSTVPDLDITFGGKRNGYGLEGFVDTD
WSTKEYVFNLNGGAISWRSRKQQLATWSSTEAEYVAAGEAGNATIYLREL
PGSIGFGCRGSTTLLEDN*
back to top

mRNA from alignment at H-paniculata_contig5464:12069..13367-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5464.12922.1 ID=mRNA_H-paniculata_contig5464.12922.1|Name=mRNA_H-paniculata_contig5464.12922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1299bp|location=Sequence derived from alignment at H-paniculata_contig5464:12069..13367- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGCATTTCACAGGTGGAGGGTGAAGATTTCTCTGAAACCAGTGCCCCCCT AGCTCGCATGTTGACGTTACGTACTATTTTTAGCTTGGCTGCTGAACATG ATTTCGAATTAGAAAGCATGGACGTCGATGCGGCGTGTTTGAACGCCCCG GTAGAAGAAGAGGTGTTTGTTAAGCTACCCCCCGAGGTTTCCTCTTCCTC CCAAGACATACCGTTTGTGCGTCGCCTTCGTAAATGCCTATACGGCCTTA AGTAGAGCGGCCGTAACTGGAATAACATTCTTGATGATGTTATTGTTGCG ATAGGGCTCAACCATTCCACTATCCACTGATGCTTGTACTTTTCCCGGGA CGATGGGGGCGAGACAGAACTTCGGGTGGCCGTGTATGTTGACGACGTGA TCATCGTTGGCCGTCGTGAGAAAGTAGCCGAGTTCAAGCATAATATAGGT CAGGGTTTTAGGATGAAAGACTTGGGGTCTCTCTCGCGCGTGTTGGGAAT AGAAGTACGACGTGACTGCTCTGATGGTAGCATAACCATCTCGCAGGATA GCTACATCCGCGAGATACTAAAGAGATGTGGTTTTGACGAGTTTCGAGGG GTACCCATCCTTGTAGAGGGAAAAGTGAAGATTTTGGCACTCGAGTCGGC CGACAAACCCTCCAAACGGAAGTCACTTGGGGCTATACTGTCGGACATAG GCGCAGGAGTACAAGAAAGCAGCAGAGGGAGAAGTGGCAATTCAACTGAA TACAGAAGCATGGTAGGATCGCTCATGTACACCTCAACAGGAACTAGACC CGATATAGCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGATCCAT GTCGGGAAGACTTCAGTGCATGCAAGCGCATTTTTTGTTATCTCAGTACT GTGCCTGACCTCGATATTACGTTCGGCGGCAAGCGTAATGGTTATGGTCT GGAAGGATTCGTTGATACCGATTGGGTGGAATATGTCGAGAACTGAAAGT CCACAAAAGAATACGTATTCAACCTAAACGGTGGTGCGATAAGTTGGCGC TCTAGGAAGCAACAGCTAGCCACGTGGTCCAGTACAGAGGCAGAGTACGT TGCTGCAGGAGAAGCGGGAAATGCGACGATATATCTTAGGGAGTTACCAG GATCGATAGGTTTCGGATGCAGGGGGAGCACGACATTGCTTGAGGACAAT TAATTAGCTAGTAATATCAGTAAGGGATCTAGCGCACACTGCAGGACAAA ACACATCGGAGTGCGCTGGCACGGAATTCGAGAGTGGATTCGGAAAGGA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig5464:12069..13367-

>mRNA_H-paniculata_contig5464.12922.1 ID=mRNA_H-paniculata_contig5464.12922.1|Name=mRNA_H-paniculata_contig5464.12922.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig5464:12069..13367- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGACTTGGGGTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGACG
TGACTGCTCTGATGGTAGCATAACCATCTCGCAGGATAGCTACATCCGCG
AGATACTAAAGAGATGTGGTTTTGACGAGTTTCGAGGGGTACCCATCCTT
GTAGAGGGAAAAGTGAAGATTTTGGCACTCGAGTCGGCCGACAAACCCTC
CAAACGGAAATGAAAGACTTGGGGTCTCTCTCGCGCGTGTTGGGAATAGA
AGTACGACGTGACTGCTCTGATGGTAGCATAACCATCTCGCAGGATAGCT
ACATCCGCGAGATACTAAAGAGATGTGGTTTTGACGAGTTTCGAGGGGTA
CCCATCCTTGTAGAGGGAAAAGTGAAGATTTTGGCACTCGAGTCGGCCGA
CAAACCCTCCAAACGGAAAAGTGGCAATTCAACTGAATACAGAAGCATGG
TAGGATCGCTCATGTACACCTCAACAGGAACTAGACCCGATATAGCATAC
GCGGTACACCAAGCAGCACGTCGTATGGAGGATCCATGTCGGGAAGACTT
CAGTGCATGCAAGCGCATTTTTTGTTATCTCAGTACTGTGCCTGACCTCG
ATATTACGTTCGGCGGCAAGCGTAATGGTTATGGTCTGGAAGGATTCGTT
GATACCGATTGGAAGTGGCAATTCAACTGAATACAGAAGCATGGTAGGAT
CGCTCATGTACACCTCAACAGGAACTAGACCCGATATAGCATACGCGGTA
CACCAAGCAGCACGTCGTATGGAGGATCCATGTCGGGAAGACTTCAGTGC
ATGCAAGCGCATTTTTTGTTATCTCAGTACTGTGCCTGACCTCGATATTA
CGTTCGGCGGCAAGCGTAATGGTTATGGTCTGGAAGGATTCGTTGATACC
GATTGGTCCACAAAAGAATACGTATTCAACCTAAACGGTGGTGCGATAAG
TTGGCGCTCTAGGAAGCAACAGCTAGCCACGTGGTCCAGTACAGAGGCAG
AGTACGTTGCTGCAGGAGAAGCGGGAAATGCGACGATATATCTTAGGGAG
TTACCAGGATCGATAGGTTTCGGATGCAGGGGGAGCACGACATTGCTTGA
GGACAATTAATCCACAAAAGAATACGTATTCAACCTAAACGGTGGTGCGA
TAAGTTGGCGCTCTAGGAAGCAACAGCTAGCCACGTGGTCCAGTACAGAG
GCAGAGTACGTTGCTGCAGGAGAAGCGGGAAATGCGACGATATATCTTAG
GGAGTTACCAGGATCGATAGGTTTCGGATGCAGGGGGAGCACGACATTGC
TTGAGGACAATTAA
back to top