prot_H-paniculata_contig5431.12880.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5431.12880.1
Unique Nameprot_H-paniculata_contig5431.12880.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length230
Homology
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: D7FKX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX2_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 4.800e-61
Identity = 126/236 (53.39%), Postives = 151/236 (63.98%), Query Frame = 0
Query:    1 MALRSLSRAGMDVGGRVVCTSKKRVAIPHNRLKVAGVLERAASSLVGQGQGQFGRSGPPSFKSGSSGPSTQLFKLLETDLMSRELIRYESWDAQPLGLHSVEDVLAELNAVT-------AECVTSGADAENAPELGAPLLVATAPEVRAAEVLAAWGQEPRLVDLPQVSKADNMLAPSADAEEGQEGVEKLTIKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            MALRSLSRAG+++G RVV T  K   +PH    V G  ER  SS+VGQG G       PSF+ GS G  TQLFKL+ETDLMS+EL RY   DA+ LGLHS++DVL+++ A T       A  VT+ A +     + A    A AP VR  EVLAAWG  P + D  +V             E G+   EK+ IKRTYQPST+KRKRKHGFLYR+KTRLGKKIL+RRQ+KGR RLGI
Sbjct:    1 MALRSLSRAGVEMGARVVGTGSKCCRVPHATRHVGGA-ERKMSSVVGQGPGHRA----PSFRQGSLGAGTQLFKLVETDLMSKELTRYGPADAEHLGLHSIQDVLSDIAAATLTPHKLAAPAVTAVAPSAEVASVPATEEPAAAPAVREEEVLAAWGLGPVVTDGSEVEGIQAPPVGEVGEEGGEVSNEKVAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKILRRRQDKGRWRLGI 231          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7V0Z319_9DELT (50S ribosomal protein L34 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0Z319_9DELT)

HSP 1 Score: 60.1 bits (144), Expect = 6.330e-9
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPSTI+RKR HGFL R +T+ G+K+LKRR+ KGR RL +
Sbjct:    1 MKRTYQPSTIRRKRTHGFLKRMETKAGQKVLKRRRAKGRKRLTV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A1I1RJT2_9GAMM (50S ribosomal protein L34 n=1 Tax=Thiohalospira halophila DSM 15071 TaxID=1123397 RepID=A0A1I1RJT2_9GAMM)

HSP 1 Score: 58.9 bits (141), Expect = 1.710e-8
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPS IKRKR HGF  R KTR G+K+LK R++KGR RL +
Sbjct:    1 MKRTYQPSNIKRKRTHGFRARMKTRAGRKVLKARRDKGRKRLTV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A2H0LNN1_9BACT (50S ribosomal protein L34 n=1 Tax=Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26 TaxID=1974748 RepID=A0A2H0LNN1_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 2.380e-8
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPS IKRKRKHGFL RS T  G+ +L+RR+ KGR RL +
Sbjct:    1 MKRTYQPSKIKRKRKHGFLKRSSTSKGRDVLRRRRRKGRKRLTV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A2W6SYU7_9GAMM (50S ribosomal protein L34 n=1 Tax=Francisella sp. TaxID=2047875 RepID=A0A2W6SYU7_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 3.310e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPS IKRKR HGFL RS+TR GK +L  R+ KGR RL +
Sbjct:    1 MKRTYQPSNIKRKRTHGFLVRSRTRAGKAVLAARRAKGRHRLAV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: C7LXJ3_DESBD (50S ribosomal protein L34 n=6 Tax=Deltaproteobacteria TaxID=28221 RepID=C7LXJ3_DESBD)

HSP 1 Score: 58.2 bits (139), Expect = 3.380e-8
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 0
Query:  187 KRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            KRTYQPST KRKR HGFL RS+T+ G+ +L+RR+ KGR RL +
Sbjct:    3 KRTYQPSTTKRKRSHGFLVRSRTKNGQAVLRRRRAKGRKRLAV 45          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7S2CLU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLU0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 3.620e-8
Identity = 28/46 (60.87%), Postives = 41/46 (89.13%), Query Frame = 0
Query:  184 LTIKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            L IKRT+QPST+++KR+HGFL R ++R+G+KI++RR+ KGRSRL +
Sbjct:  159 LAIKRTFQPSTVRKKRQHGFLVRIRSRVGRKIVQRRRNKGRSRLSL 204          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7V2MRB9_9BACT (50S ribosomal protein L34 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V2MRB9_9BACT)

HSP 1 Score: 57.8 bits (138), Expect = 4.610e-8
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPS IKRKR HGF  R KT+ G+K+LKRR++KGR +L +
Sbjct:    1 MKRTYQPSRIKRKRTHGFRARMKTKSGRKVLKRRRKKGRKKLTV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A101DJY4_9DELT (50S ribosomal protein L34 n=2 Tax=Desulfonauticus TaxID=206664 RepID=A0A101DJY4_9DELT)

HSP 1 Score: 57.8 bits (138), Expect = 4.610e-8
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 229
            +KRTYQPS IKRKR HGFL R +TR GK ++KRR+ KGR RL +
Sbjct:    1 MKRTYQPSKIKRKRTHGFLVRMRTRGGKLVIKRRRAKGRKRLTV 44          
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7S2Y786_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y786_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 5.160e-8
Identity = 29/42 (69.05%), Postives = 36/42 (85.71%), Query Frame = 0
Query:  186 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRL 227
            IKRTYQPS +KRKRKHG+L RS+T+ G+KI+ RR+ KGR RL
Sbjct:  119 IKRTYQPSIVKRKRKHGYLVRSRTKAGRKIMNRRRAKGRKRL 160          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX2_ECTSI4.800e-6153.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7V0Z319_9DELT6.330e-965.9150S ribosomal protein L34 n=1 Tax=Deltaproteobacte... [more]
A0A1I1RJT2_9GAMM1.710e-865.9150S ribosomal protein L34 n=1 Tax=Thiohalospira ha... [more]
A0A2H0LNN1_9BACT2.380e-865.9150S ribosomal protein L34 n=1 Tax=Candidatus Omnit... [more]
A0A2W6SYU7_9GAMM3.310e-865.9150S ribosomal protein L34 n=1 Tax=Francisella sp. ... [more]
C7LXJ3_DESBD3.380e-865.1250S ribosomal protein L34 n=6 Tax=Deltaproteobacte... [more]
A0A7S2CLU0_9STRA3.620e-860.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7V2MRB9_9BACT4.610e-863.6450S ribosomal protein L34 n=1 Tax=bacterium TaxID=... [more]
A0A101DJY4_9DELT4.610e-865.9150S ribosomal protein L34 n=2 Tax=Desulfonauticus ... [more]
A0A7S2Y786_9STRA5.160e-869.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 187..227
e-value: 3.0E-17
score: 62.3
IPR000271Ribosomal protein L34TIGRFAMTIGR01030TIGR01030coord: 187..228
e-value: 1.5E-15
score: 55.2
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 157..227
IPR000271Ribosomal protein L34HAMAPMF_00391Ribosomal_L34coord: 186..229
score: 13.186
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 187..206
NoneNo IPR availablePRODOMPD003101coord: 189..224
e-value: 8.0E-7
score: 126.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5431contigH-paniculata_contig5431:1913..7869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5431.12880.1mRNA_H-paniculata_contig5431.12880.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5431 1769..9266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5431.12880.1 ID=prot_H-paniculata_contig5431.12880.1|Name=mRNA_H-paniculata_contig5431.12880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MALRSLSRAGMDVGGRVVCTSKKRVAIPHNRLKVAGVLERAASSLVGQGQ
GQFGRSGPPSFKSGSSGPSTQLFKLLETDLMSRELIRYESWDAQPLGLHS
VEDVLAELNAVTAECVTSGADAENAPELGAPLLVATAPEVRAAEVLAAWG
QEPRLVDLPQVSKADNMLAPSADAEEGQEGVEKLTIKRTYQPSTIKRKRK
HGFLYRSKTRLGKKILKRRQEKGRSRLGI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000271Ribosomal_L34
IPR020939Ribosomal_L34_CS