mRNA_H-paniculata_contig5431.12880.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5431.12880.1
Unique NamemRNA_H-paniculata_contig5431.12880.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: D7FKX2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX2_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 1.020e-55
Identity = 126/236 (53.39%), Postives = 151/236 (63.98%), Query Frame = 1 
Query:  145 MALRSLSRAGMDVGGRVVCTSKKRVAIPHNRLKVAGVLERAASSLVGQGQGQFGRSGPPSFKSGSSGPSTQLFKLLETDLMSRELIRYESWDAQPLGLHSVEDVLAELNAVT-------AECVTSGADAENAPELGAPLLVATAPEVRAAEVLAAWGQEPRLVDLPQVSKADNMLAPSADAEEGQEGVEKLTIKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            MALRSLSRAG+++G RVV T  K   +PH    V G  ER  SS+VGQG G       PSF+ GS G  TQLFKL+ETDLMS+EL RY   DA+ LGLHS++DVL+++ A T       A  VT+ A +     + A    A AP VR  EVLAAWG  P + D  +V             E G+   EK+ IKRTYQPST+KRKRKHGFLYR+KTRLGKKIL+RRQ+KGR RLGI
Sbjct:    1 MALRSLSRAGVEMGARVVGTGSKCCRVPHATRHVGGA-ERKMSSVVGQGPGHRA----PSFRQGSLGAGTQLFKLVETDLMSKELTRYGPADAEHLGLHSIQDVLSDIAAATLTPHKLAAPAVTAVAPSAEVASVPATEEPAAAPAVREEEVLAAWGLGPVVTDGSEVEGIQAPPVGEVGEEGGEVSNEKVAIKRTYQPSTLKRKRKHGFLYRAKTRLGKKILRRRQDKGRWRLGI 231
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BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7V0Z319_9DELT (50S ribosomal protein L34 n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V0Z319_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 5.260e-8
Identity = 29/44 (65.91%), Postives = 37/44 (84.09%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPSTI+RKR HGFL R +T+ G+K+LKRR+ KGR RL +
Sbjct:    1 MKRTYQPSTIRRKRTHGFLKRMETKAGQKVLKRRRAKGRKRLTV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A1I1RJT2_9GAMM (50S ribosomal protein L34 n=1 Tax=Thiohalospira halophila DSM 15071 TaxID=1123397 RepID=A0A1I1RJT2_9GAMM)

HSP 1 Score: 58.5 bits (140), Expect = 1.340e-7
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS IKRKR HGF  R KTR G+K+LK R++KGR RL +
Sbjct:    1 MKRTYQPSNIKRKRTHGFRARMKTRAGRKVLKARRDKGRKRLTV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A2H0LNN1_9BACT (50S ribosomal protein L34 n=1 Tax=Candidatus Omnitrophica bacterium CG11_big_fil_rev_8_21_14_0_20_45_26 TaxID=1974748 RepID=A0A2H0LNN1_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 1.840e-7
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS IKRKRKHGFL RS T  G+ +L+RR+ KGR RL +
Sbjct:    1 MKRTYQPSKIKRKRKHGFLKRSSTSKGRDVLRRRRRKGRKRLTV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A2W6SYU7_9GAMM (50S ribosomal protein L34 n=1 Tax=Francisella sp. TaxID=2047875 RepID=A0A2W6SYU7_9GAMM)

HSP 1 Score: 57.8 bits (138), Expect = 2.510e-7
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS IKRKR HGFL RS+TR GK +L  R+ KGR RL +
Sbjct:    1 MKRTYQPSNIKRKRTHGFLVRSRTRAGKAVLAARRAKGRHRLAV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: C7LXJ3_DESBD (50S ribosomal protein L34 n=6 Tax=Deltaproteobacteria TaxID=28221 RepID=C7LXJ3_DESBD)

HSP 1 Score: 57.8 bits (138), Expect = 2.570e-7
Identity = 28/43 (65.12%), Postives = 35/43 (81.40%), Query Frame = 1 
Query:  703 KRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            KRTYQPST KRKR HGFL RS+T+ G+ +L+RR+ KGR RL +
Sbjct:    3 KRTYQPSTTKRKRSHGFLVRSRTKNGQAVLRRRRAKGRKRLAV 45
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7V2MRB9_9BACT (50S ribosomal protein L34 n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V2MRB9_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 3.440e-7
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS IKRKR HGF  R KT+ G+K+LKRR++KGR +L +
Sbjct:    1 MKRTYQPSRIKRKRTHGFRARMKTKSGRKVLKRRRKKGRKKLTV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A101DJY4_9DELT (50S ribosomal protein L34 n=2 Tax=Desulfonauticus TaxID=206664 RepID=A0A101DJY4_9DELT)

HSP 1 Score: 57.4 bits (137), Expect = 3.440e-7
Identity = 29/44 (65.91%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS IKRKR HGFL R +TR GK ++KRR+ KGR RL +
Sbjct:    1 MKRTYQPSKIKRKRTHGFLVRMRTRGGKLVIKRRRAKGRKRLTV 44
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7S2CLU0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CLU0_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 4.680e-7
Identity = 28/46 (60.87%), Postives = 41/46 (89.13%), Query Frame = 1 
Query:  694 LTIKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            L IKRT+QPST+++KR+HGFL R ++R+G+KI++RR+ KGRSRL +
Sbjct:  159 LAIKRTFQPSTVRKKRQHGFLVRIRSRVGRKIVQRRRNKGRSRLSL 204
[Close]
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Match: A0A7V4ZN70_9DELT (50S ribosomal protein L34 n=5 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A7V4ZN70_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 4.700e-7
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 1 
Query:  700 IKRTYQPSTIKRKRKHGFLYRSKTRLGKKILKRRQEKGRSRLGI 831
            +KRTYQPS I+RKR HGFL R  T+ G+K+LKRR+ KGR RL +
Sbjct:    1 MKRTYQPSNIRRKRTHGFLERMSTKSGRKVLKRRRMKGRKRLTV 44
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5431.12880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKX2_ECTSI1.020e-5553.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7V0Z319_9DELT5.260e-865.9150S ribosomal protein L34 n=1 Tax=Deltaproteobacte... [more]
A0A1I1RJT2_9GAMM1.340e-765.9150S ribosomal protein L34 n=1 Tax=Thiohalospira ha... [more]
A0A2H0LNN1_9BACT1.840e-765.9150S ribosomal protein L34 n=1 Tax=Candidatus Omnit... [more]
A0A2W6SYU7_9GAMM2.510e-765.9150S ribosomal protein L34 n=1 Tax=Francisella sp. ... [more]
C7LXJ3_DESBD2.570e-765.1250S ribosomal protein L34 n=6 Tax=Deltaproteobacte... [more]
A0A7V2MRB9_9BACT3.440e-763.6450S ribosomal protein L34 n=1 Tax=bacterium TaxID=... [more]
A0A101DJY4_9DELT3.440e-765.9150S ribosomal protein L34 n=2 Tax=Desulfonauticus ... [more]
A0A7S2CLU0_9STRA4.680e-760.87Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7V4ZN70_9DELT4.700e-763.6450S ribosomal protein L34 n=5 Tax=unclassified Del... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5431contigH-paniculata_contig5431:1769..9266 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRibosomal protein L34
Ec32 orthologEc-17_001690.1
Exons2
Model size2231
Cds size690
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5431.12880.1prot_H-paniculata_contig5431.12880.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5431 1913..7869 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930560.7684429-UTR-H-paniculata_contig5431:1768..19121622930560.7684429-UTR-H-paniculata_contig5431:1768..1912Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5431 1769..1912 +
1691481348.8543465-UTR-H-paniculata_contig5431:1768..19121691481348.8543465-UTR-H-paniculata_contig5431:1768..1912Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5431 1769..1912 +
1622930560.8133614-UTR-H-paniculata_contig5431:7869..92661622930560.8133614-UTR-H-paniculata_contig5431:7869..9266Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5431 7870..9266 +
1691481348.8930159-UTR-H-paniculata_contig5431:7869..92661691481348.8930159-UTR-H-paniculata_contig5431:7869..9266Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5431 7870..9266 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930560.7812037-CDS-H-paniculata_contig5431:1912..21021622930560.7812037-CDS-H-paniculata_contig5431:1912..2102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5431 1913..2102 +
1691481348.865903-CDS-H-paniculata_contig5431:1912..21021691481348.865903-CDS-H-paniculata_contig5431:1912..2102Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5431 1913..2102 +
1622930560.7947295-CDS-H-paniculata_contig5431:7369..78691622930560.7947295-CDS-H-paniculata_contig5431:7369..7869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5431 7370..7869 +
1691481348.8785815-CDS-H-paniculata_contig5431:7369..78691691481348.8785815-CDS-H-paniculata_contig5431:7369..7869Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5431 7370..7869 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5431.12880.1

>prot_H-paniculata_contig5431.12880.1 ID=prot_H-paniculata_contig5431.12880.1|Name=mRNA_H-paniculata_contig5431.12880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=230bp
MALRSLSRAGMDVGGRVVCTSKKRVAIPHNRLKVAGVLERAASSLVGQGQ
GQFGRSGPPSFKSGSSGPSTQLFKLLETDLMSRELIRYESWDAQPLGLHS
VEDVLAELNAVTAECVTSGADAENAPELGAPLLVATAPEVRAAEVLAAWG
QEPRLVDLPQVSKADNMLAPSADAEEGQEGVEKLTIKRTYQPSTIKRKRK
HGFLYRSKTRLGKKILKRRQEKGRSRLGI*
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mRNA from alignment at H-paniculata_contig5431:1769..9266+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5431.12880.1 ID=mRNA_H-paniculata_contig5431.12880.1|Name=mRNA_H-paniculata_contig5431.12880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7498bp|location=Sequence derived from alignment at H-paniculata_contig5431:1769..9266+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGTGAACTCTATTACATCATAGATCAACCACTGCACCGTCTCGTGAGA
GCGAGGCATACAACAATTCAGGCCAAAGTGGTACACGCCTATCTACAACC
TCCACTCGCAGCTTTACTGTACAACTGTTAAAGCTTGCGTAGAAATGGCG
CTCAGATCCTTGAGCCGAGCGGGAATGGATGTAGGCGGTCGAGTAGTTTG
CACGAGCAAAAAGAGGGTTGCTATTCCGCACAACAGACTGAAAGTGGCAG
GTGTGCTTGAGCGAGCAGCGTCCTCCCTGGTAGGGCAGGGGCAGGGACAG
TTTGGCCGCTCTGGCCCGCCGTCTTTCAAATCAGGTGAAATACTTTGAAC
GGAAGGGAGGGTGCGATTCTCGCCCCTCCGACTCATCCTACGCGCGTATT
CTAGTTAGGTAATCTGTCCGTACTGTTTTTGTACGACTATTGGGAAAATT
GTCCCATCCACACTTGCGCTATGGCAAGTCAACACCCTGTCTCATCTCCA
CCCTCCACACAAGTGAATACAACAAGTGAAGTTGTGCGTACTTATTTTCG
GCTCGCTGTGTATGATATTCTGTACGGACAGTGCAATGTAGTACAGTCAG
CGCTGAGATTCCCTTCTGGAACGGTGGTACAGACATTCTTGCTGATCTTA
TGTGGTGTCATAGCCTTACTTAGAGGGTACATTCTAGCTCGACGTCTTTC
TCTCTGTGTGCTTGCTCGACTTGTGGGGCGCTTCATCTTCTGATTGCAGT
ATTTGATTATTTGAGTGTGTACATCGTACATATTAGTAATATATGTATAG
GCAAAGAGTTTATATCCTGATGTCCTCGAGTTTTTCATGTATCTTATGAG
TATTTTCTTTTTGTAAATATGGAAAAATAAAGTTTAACACCAACCTCAGA
AAGAAGCTGATAGCGATGCCCTCCGTGCCGGTTCAGCTACATTTGATGTG
AGATGCGAACACCGACTCTTGACGTTATTTAGCCCCAGGTCTCTTTCATC
ACATCATTATCACTCACATGTCATCTCGCACTCTTGAAGGTGGTTTTCAA
CTTACAGTCTATCCGTTTGAAAAAATGTATTGACTGTGGAGACCAGTAGA
TCAGTGTGGAGTAAAATAGATAAATGATGGCAGACCGCGCAGCATGCGGT
GCATTGATTCATATCTAGGGCTACACGCTCACGCTACCTTATGTTTCCGT
GAGGTTTGTATGTTGGGCATTGCTGTACGTCGCAGTTGGTGCTTCCTTGC
GGTAGACACCATTGGGCTACTGACGGTACTGAGTCGGAGTACAGTACAAC
AGTGCTAGCACACTATCGAAATTCCGTAGAAAACTGAAAATACATCCGAA
GCAGTCTGTATTCCAAAAATAGTATGAATTACATTATCCTGATGAACCCG
CCCAGTGACCGAAAGTGCAACATTTTCTCTCTCATAGTGTAAATCTACAT
CTTTCTGGAGTACTCATGTAAGGGTGATCCTTATCGATTCAAGATTGAAT
CATACACCGATGTGAAACGGCCGGCCCTTTCGTTAGGCAGTCCACTACAC
ACGGAATATATAGTACGATGAGTACACACAGTATGTGTTTGTTGCTGCTC
TCTTCAGGGGTCAAGAGATGTTCGTTTCTGCACCCGTTCTCACATGGCTT
TGAGTTGCTGTTCGCGTTGGTTAGTCGTGTGCTGTACACACAGCCTGGTA
CACTGTCCATCATACACTGTCACCTTCTCTGCGGACTGTGTCACACATGT
CACTCGCACTAATTGTCAACACGCTAGCTGGTCAAATCAAGGGCCCCAAT
TTCGTAGATTTGGTGGTTCATGAAGTTAAAACAAAATCTCCTTCGAGCAC
AGTGGACAATAATTCCTCAATATCTCGCAGACCTTGCAGAGTTACATCCT
CGTCCAAGATCCATTTTGGAAAGAGCACAACCCAAGTAATATTTGCTGGA
TGCTGGGCAGGCGTCCACATCTTGCGCTCCGAAGTAGCTGTAGGTGCTCC
CGATGGCTTGTATTAATAGTCGGCGGTTTCATAATATCGGTATATTAACA
AATCGTATCAAGTATGATGCGATATCGCCTTGGTTTGATGGTGTCATCAC
CTATTAATCCCCATGGTGCTGGGCCGTTTACAATACCTATACAATGCTCA
GAAAACAGGCCAAAACCCTTCTGATTTTTTTTGTGACAAACGCCCACGAC
ATTACGGGGATAGGCAGCTAGCTCTGTAGACAGTATAAACCGTCCTGAAG
TTATTGGAGACATATAGACAAAAATGGATGTAATTTGGATTTCCGCGATA
GCAGCACTTAATCGAAACGTAAATCACAATTTATATGATGAGCGACTGAC
TCATTGTACAGAAGATGTATGACGCACAGAGTCGCACCCGGGACATTTGA
GGAAAAAGATCACGGCGGCTATCACGCGCCATTGTTTTGACACCGGCAGA
TAGGAGACAGCAAATGAATACCGCAAGATTGCACTCGCCGGACAAAGACA
TGTAAAAAATTGATGTGTTCGCCACAAAAACTTGAAAGTATTCGCCTGAG
TTTCAGAATGAGCCGAAATACAAAATGAAGTCCCCACCCCTATTCACTCT
ATTTACGTGTTTGTTGGCAATCGTGGATGATCGAAGGAATAAAAAAATTC
ACGAGCTCCTTCTGAAACTCAGACCAATACTCCCAGGTTGTGTAAAAACC
ATTTGCAAGCATTCGTATTTGTCCGGGAGGTGAAAAATTTGTCATGACTG
AAGTGTGTCTGTCTACCTCTGTCGGAAACATCGGCCGCAGCCACAGTGGC
AGGCTGTTCAAGCATATCATGCGCTGCCATCACTCTCGTCTACGCTGTCA
ACATTACCAGTTTTTGGCGCCCACAAAATTCAAGACCATACTGACGTCGT
CGCCCGTAAAAAGTTCAGCAGGCCAGAAATGAAATGACCAAACGAAACTG
CACGTTTTTCTCGTACCCTCTAAACCGCCGGACGTATTGGAGAGTTTCGG
CAAACAGTAAAAAGGGCTCAGGATTTGATTCAGGGTCAGGTTTTGAGGTA
TGACACATGACATGTTCCCTCTAACTTTACCCTGAGCGGAGATCCTGAGA
AAAAAAAAATGGCGAGCGAGGAAATGAACTATTATTATTTCCTTGACTCT
TTTCTGCGGCTTAGGCTCAGGGTTTGCGAACTGACGCATATCAACCCGAC
TCACATATGCAGCTGCAAACAAACACAAAGCCAACTAAACATACACTTAC
GACAAGGTAGCTACTGCTTCGGTAGAGGCCGCGAGTCAATCTCCCGGGAG
CACTCGAGGACATGTGTGATAGTACGATACCCGCGTTTAGGTCTAGGAAC
ATGCTTTTACGGCTCGGGCCACGGCTCGCGAAACTAGAGTCTTGCTTGAC
ATTTCAGATCTGTCGTTTCGCCCACTCACGGAGATACCTTGCCCGCTCTC
CACCAAACAAAAAGGAGAAAACGTGCCTAAAGAGGAAGGAGCTGTTCGTC
AAATGTAAGGCTCCGATAGATGGTCACCGTGCTGCCGTATACAGTACAGA
ATAGTACGGTACTACGTTGCCGGACGCTGGCACGGGATGGCGTTATTTTT
GCCTTGGCAACTGGCTGTTCTGTGGCGACCATATTTTTGGTTGACATGCA
TTCAAAAACCCTTTCGAATACTACTCTCGGTAGGTGCATGCGTGCCTGTC
GTACCGGTGGACCTTGTACAAGCTAGAGAAGACCAGTGGGTGTTACTGGC
CCAGTCCCAATTGACCCTCCAGCTTGCGTCTGTGTTGATGAAGCAAAATG
CCACATCCATACAAAAGATAAAAATACGCTTTAGATTGGTCTGTGGAGCA
AAAAAAGTACCAATCAGAGTTTGTCACTATCTGGGATGTTAGACGTACTA
TAGCGCCATCGTATGCCCGGCGGCCTGCAGAGCAGGGAGGGGGTGGAGCA
GGTTAACCACGCGCATCATGCAGTCCCATGTCTCAATCGTGCCGCAAGAC
TGGGTGACGCTAGAATATAGAATAGGGCCATATGCCCCAGGCGTGGTCTG
TTTCACATGGTATATAATAAACTCCTCTACGGTGAAATGGCGGCCCGGTT
GGTATCTCTTCACCCTTTTGTTTTCGTGGGTTCCACCGCACGTATATCAA
GACTGTTGGAACTTTGGAGTTGCTGTCACTCACGGTTTCTCCCTGACCCC
TCAGTCAAATCTTGAGCCCAAAAACAATTTTTGCCGAAGCTCTCTACTGG
GCAGGTATTCTGTGGCCCCAAAACAATTTGACAAGTGTACAGGAGACTAC
ATGTCTTTGATTGGCTGTTGTTGGGTGAACGAACGTGCATGATTGGCCTG
AGCCTTGGTATTTCATGCACAATCCGCTACCATACTCGAGCACTACGGGG
TCGAACGTCACCCCCACCCACTCGCCAAAAGGGACTCCCCCGCTTTTCGT
GGCAGTTACGCCGCGGGACTTTTACGGCCCTGTATTGTTATTTTTCATGA
TCTGGCTGTATAAGGATTATTATCACATCACAATCATTATTCTTTTGGCC
CGAAATATCAAATATTTCATCAACCTGATAATTTACGTGACACCGACCCC
TGCGTTTTTTTTCAAATGTCGATGTGCTAGTCACTGATGACCCTTTACCG
ACGAAATGGCTGCTTTCTCTTTTCCTTTTTTTGTCCTTGAAAGGAGAGGA
GGAAACCTTTGCCCAACACTTACCCCGATATTCGGGTTCGTGTGTCAGTT
GCCCGAAGGTCCGACTAGACAACCTTGCGGCTGTCATGTAGGGAAGGCAC
CATAAGCGTTCGCCCGCCCTTTGCTCAGGGTAGTGTGGGACTCGCACCCA
CTAAAACCCCTTATGTTATTCCCTTCAACTTGGCGCAGTACACGCGCCGC
CCTGCTCAGTGAGCTTCGGCCCTAGGTGCTTTCTCTTTTCCAAACACGTT
TAGCGACGTTTTGAGGGAGAAGCTGAGAAACACTTGTTAGTCTGAACTCA
AGAAATAGAAATCCATCTGTAAGGACAAATGGTCGGAGCAAAAGGTGGTC
GGCCGATACGACCCGAGATAAAACCTTATGACCGAAACTGGAAGTTGCAC
TTATAACCTGTATTCTCTGTCTGGCATTCTTTGTTCAAAGGCCTTTCTTA
CTGTGCCGAGGTATGAAAAAAAAAGTTCATTCGACGAATATTTAAACGTT
GTCCTCAATAATTCAGAAAATAAAACAGACCCTGTAAAAGTTCTGGAAAA
CATGGGGGTACGCATATGGGATGCTGGTAGATTCTCGACAGACTTGTAAC
CCTGCACAGAGCGAGCTCATCTCTTGAGACATATATAGGAGTGAACTGAA
ACGATAGCTATGCTCTGCACTGCTGGAGGGCAATCTACCTGTCACCCCCT
GGGTCATCCCACGTATATTTATAGGACGGCGATCGAGTACTAGTCAAGCA
GTTCATCCGCTCCGTCCAGTCGCCACCCTAAGGTTGTATAGTATATTAAT
TCAATTGCCTATTTTAGCTTTTCGCGATAGATGAATGCTCATTTTGCGCG
CCCTCCCCCCGCTGTACGCATTTATGGACAACGCAACGTTTGGATTGACA
GGGTCGTCGGGGCCGAGCACCCAGCTGTTTAAGCTTTTGGAGACAGACCT
TATGTCTAGGGAGCTGATTCGCTACGAGTCTTGGGACGCACAGCCTCTGG
GACTCCATTCCGTAGAAGATGTACTAGCGGAGCTCAACGCAGTCACGGCA
GAGTGTGTGACTTCTGGTGCAGACGCGGAGAACGCTCCCGAGCTCGGAGC
GCCACTGTTAGTCGCAACCGCACCTGAAGTCAGGGCGGCGGAGGTGCTGG
CTGCTTGGGGCCAAGAACCGCGGTTGGTGGATTTACCACAAGTATCCAAA
GCGGATAATATGTTGGCGCCAAGTGCAGACGCAGAGGAGGGGCAAGAGGG
GGTGGAGAAGTTGACCATTAAGCGCACGTACCAGCCTAGCACCATCAAGA
GGAAGAGGAAGCATGGGTTTCTGTACCGGTCTAAGACTCGCCTCGGCAAA
AAGATCTTGAAGAGGCGACAAGAGAAGGGTCGCTCGCGGCTCGGTATCTA
GGGACGTATGCAGGTTCAAAGTGAAGCAAGGGTGGTAGAGTGGAAGTGGA
TGGATATGTTGTGCAAGTAGTGTCGTTGCTGATCGGTCTGTCAACCCCTT
GCCTCACTAGAGCAGTAGACAATAACCGAAAATCTCCATCCCTCCCCCCC
CACACTTTCTAAGCCTGCAGTTGCAAAGGTGCTGTCGACTGTTGGCACGC
ATTGCTAACCATGCAGGATTTCTTCGCCGATAAACGTATTTTATGGTGAC
CCTAGATGTGCTTCTGTTTTTTTTCATATAACACCCATCGTAAGGGCTTG
GCCTGCTTGAACAGCTGCTGTGATGTACTAAAGACAAACCCTGAGCTGTA
CATGATAGCCGTCACCGTTGGGTGCAGCTGCGTTGTCGTTATCGCCCTCG
CTCAGAGCTCACATGCGTTTATCCCGGGATTGTGCGTGTTCCGGGATTGC
TACGTTTTGTATGATGCTCTCGGGCATGACATGATATGACATGATCACAC
CAGATTCTTTAGGAAGAACGAGTTTGGCTTTTCTAGTATCGTGGTTTGAT
CAGTCTCAGGAAACGTTCGAATTTTTGTTGGTATGTTGCTTTGGAGCAAA
TTTGGCGTCCAGCTGTGTGAGTATAGTGATGAGTCTAGCAGGTATTTTTC
TGTTGGCGTTTTTTGTTGTAGGCTGCGATTGTAGACGAAGAACTGAGCTT
ATCGGTCACGACTAAGTTCTCTTCTGTTGCCAGAGTGTTCCCATCTTTTT
CTTGTTTCCAGGTCGTGCCATTTCAAGGCTAGCTTTTCTCCAGTACAATC
GAACACTTTTACGAAGGAAAGCAAGCCAATTGCGCGACATAGGTATGATC
ACGTGTAGACGGTGCACTTTGTCAGGATTGCTGTAGGTTAGTATTTTCGA
GTGTCCTCGGTGACGGTTTCTGGTGGAAAACGAGCCAGGGTTCACAAGAC
GCAGACTGTTTTGGTTTTCAACATGTCTGTCTAGTGGTGACGGTGGAGGT
GGTGGTCATGTTGAAATGTAGAGATAATTTCAGAGAGCGAGAGTGGTGTG
CATTCAACAGCGATTTCGTTGTTGTTGGTGTCGCTGGGAAATTTTTGGAC
GTGGCGCGCTGCGCAAGGAAGTGTCGGGAACGTCCCTGATGTATGGCAGC
AGCAGTGTGGAGAAGAGAAAACGATAATCGTAAATGGATATCTGCTCCCA
CATTCACACGCGAACACACGGTTATGGAGTTTGGTTGGTATGTGCTGTTT
GCAGATTTGACCGCCGAGGCATCTTCCAGAGCCGGCAGCCTTGCTACGTC
ATCGGTGCAGCACAGCGTAGTTCAGCAACATCTCTCGACCAAAGACGATG
GAGACCGTGTTTTTTAGTTTTTTTTTTTTTTCGAAGTGGATATAATTG
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Coding sequence (CDS) from alignment at H-paniculata_contig5431:1769..9266+

>mRNA_H-paniculata_contig5431.12880.1 ID=mRNA_H-paniculata_contig5431.12880.1|Name=mRNA_H-paniculata_contig5431.12880.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1380bp|location=Sequence derived from alignment at H-paniculata_contig5431:1769..9266+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCTCAGATCCTTGAGCCGAGCGGGAATGGATGTAGGCGGTCGAGT
AGTTTGCACGAGCAAAAAGAGGGTTGCTATTCCGCACAACAGACTGAAAG
TGGCAGGTGTGCTTGAGCGAGCAGCGTCCTCCCTGGTAGGGCAGGGGCAG
GGACAGTTTGGCCGCTCTGGCCCGCCGTCTTTCAAATCAGATGGCGCTCA
GATCCTTGAGCCGAGCGGGAATGGATGTAGGCGGTCGAGTAGTTTGCACG
AGCAAAAAGAGGGTTGCTATTCCGCACAACAGACTGAAAGTGGCAGGTGT
GCTTGAGCGAGCAGCGTCCTCCCTGGTAGGGCAGGGGCAGGGACAGTTTG
GCCGCTCTGGCCCGCCGTCTTTCAAATCAGGGTCGTCGGGGCCGAGCACC
CAGCTGTTTAAGCTTTTGGAGACAGACCTTATGTCTAGGGAGCTGATTCG
CTACGAGTCTTGGGACGCACAGCCTCTGGGACTCCATTCCGTAGAAGATG
TACTAGCGGAGCTCAACGCAGTCACGGCAGAGTGTGTGACTTCTGGTGCA
GACGCGGAGAACGCTCCCGAGCTCGGAGCGCCACTGTTAGTCGCAACCGC
ACCTGAAGTCAGGGCGGCGGAGGTGCTGGCTGCTTGGGGCCAAGAACCGC
GGTTGGTGGATTTACCACAAGTATCCAAAGCGGATAATATGTTGGCGCCA
AGTGCAGACGCAGAGGAGGGGCAAGAGGGGGTGGAGAAGTTGACCATTAA
GCGCACGTACCAGCCTAGCACCATCAAGAGGAAGAGGAAGCATGGGTTTC
TGTACCGGTCTAAGACTCGCCTCGGCAAAAAGATCTTGAAGAGGCGACAA
GAGAAGGGTCGCTCGCGGCTCGGTATCTAGGGTCGTCGGGGCCGAGCACC
CAGCTGTTTAAGCTTTTGGAGACAGACCTTATGTCTAGGGAGCTGATTCG
CTACGAGTCTTGGGACGCACAGCCTCTGGGACTCCATTCCGTAGAAGATG
TACTAGCGGAGCTCAACGCAGTCACGGCAGAGTGTGTGACTTCTGGTGCA
GACGCGGAGAACGCTCCCGAGCTCGGAGCGCCACTGTTAGTCGCAACCGC
ACCTGAAGTCAGGGCGGCGGAGGTGCTGGCTGCTTGGGGCCAAGAACCGC
GGTTGGTGGATTTACCACAAGTATCCAAAGCGGATAATATGTTGGCGCCA
AGTGCAGACGCAGAGGAGGGGCAAGAGGGGGTGGAGAAGTTGACCATTAA
GCGCACGTACCAGCCTAGCACCATCAAGAGGAAGAGGAAGCATGGGTTTC
TGTACCGGTCTAAGACTCGCCTCGGCAAAAAGATCTTGAAGAGGCGACAA
GAGAAGGGTCGCTCGCGGCTCGGTATCTAG
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