prot_H-paniculata_contig5411.12854.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5411.12854.1
Unique Nameprot_H-paniculata_contig5411.12854.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length181
Homology
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: D8LHI8_ECTSI (Protein binding protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHI8_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 3.660e-23
Identity = 64/174 (36.78%), Postives = 78/174 (44.83%), Query Frame = 0
Query:    1 MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHP------------------------------------------------------DGSXXXXXXXXXXXXXXXXXXXXTTP------VTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMKYT 114
            MGFAGEDFPRAYF S++GR VD EATRRL+AEMD+  D    P                                                      +G                       P      VTDW+L+E+VWEHA  TRLK +L+DHP+L+SEKPFN+S +RMKYT
Sbjct:    1 MGFAGEDFPRAYFTSLIGRTVDLEATRRLEAEMDAAVDSAGSPARARAGGNXXXKAAPSPPANGQPQRGGKGAAASPAVPGGSGESEGGAANGEEKDEGDGRTVYRWHVDSLMGGGADMDVVPLMEDGFVTDWDLMEKVWEHAERTRLKTKLSDHPVLISEKPFNSSKERMKYT 174          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A6H5KHN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN4_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 5.130e-20
Identity = 63/176 (35.80%), Postives = 78/176 (44.32%), Query Frame = 0
Query:    1 MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTP--------------------------------------------------------------VTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMKYT 114
            MGFAGEDFPRAY  S++GR VD EATRRL+AEM +  D  R P  +               XXX   +P                                                              VTDW+L+E+VWEHA  TRLK +L+DH +L+SEKPFN+S +RM YT
Sbjct:   55 MGFAGEDFPRAYLTSLIGRTVDLEATRRLEAEMGAAVDSARSPAKAGGERGGATARRMWHPXXXPTGSPSGEARGPQFRRPCRGAQGNQKGAPRTERRRTGGTGGRFIDGTGYLMGGGADMDVLPLMEDGFVTDWDLIEKVWEHAERTRLKTKLSDHQVLISEKPFNSSKERMMYT 230          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: W7TUS4_9STRA (Actin related protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUS4_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.450e-10
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0
Query:    1 MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMKY 113
            +GFAGED+PR+YFPS  G I   ++T R      S  +  +                            V DW+++E++W+HA +T L V L   P+L+ E+ FNTS  R +Y
Sbjct:   24 LGFAGEDYPRSYFPSCAGFIPPDDSTTRATNPSSSKQNNSKQIQRKEYKFDLGHNDSRMNVHTPLSGGLVEDWDMVEQIWQHANKTALTVDLAQTPLLLIERAFNTSKLRQEY 136          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A7S2X9A3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X9A3_9EUKA)

HSP 1 Score: 62.8 bits (151), Expect = 2.480e-8
Identity = 35/111 (31.53%), Postives = 51/111 (45.95%), Query Frame = 0
Query:    2 GFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMK 112
            GFAG+D PRA FPS+VG       TRR+  +     DQ+                             +T+W+ +E++W H     L+V   +HP+L +E PFNT  +R K
Sbjct:   29 GFAGDDAPRAVFPSIVG-------TRRVPVQKPKDQDQNLETKNHYVGKDAWNMRAILNIKYPIEHGVITNWDAMEKLWRHTFYDALRVAPDEHPLLFTETPFNTMPNREK 132          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A833QU34_9POAL (Actin-related protein 4 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QU34_9POAL)

HSP 1 Score: 62.8 bits (151), Expect = 2.610e-8
Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 0
Query:    2 GFAGEDFPRAYFPSVVGRI----VDSEATRRLQAEMDSTADQH---RHPDG----SXXXXXXXXXXXXXXXXXXXXTTP-----VTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMK 112
            G+AGED P+A FPS VG I    VDSEA  + + E DS  D     + PD     +                     +P     V DW++++ +W HA   RL +  T+HP+L++E   NT+H R K
Sbjct:   22 GYAGEDAPKAVFPSAVGSIDQMEVDSEA--KPEKESDSAQDPKSSAKPPDNDKSKAKRKLYVGTQALDYRRDHMEVISPFKDGVVVDWDMVDNIWNHAFRQRLLIDPTEHPMLLAESSINTAHQREK 146          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: ARP4A_ARATH (Actin-related protein 4A n=5 Tax=Arabidopsis thaliana TaxID=3702 RepID=ARP4A_ARATH)

HSP 1 Score: 60.1 bits (144), Expect = 2.770e-8
Identity = 39/118 (33.05%), Postives = 55/118 (46.61%), Query Frame = 0
Query:    2 GFAGEDFPRAYFPSVVGRI------VDSEATRRLQA-EMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMK 112
            G+AGED P+A FPSVVG I      +D  A     A E D    + +   GS                       VTDW++++ VW+HA    L +  T+HP+L++E P N+   R K
Sbjct:   22 GYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGI---VTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A484N0X4_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484N0X4_9ASTE)

HSP 1 Score: 60.5 bits (145), Expect = 3.370e-8
Identity = 37/114 (32.46%), Postives = 52/114 (45.61%), Query Frame = 0
Query:    1 MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMKYT 114
            +GFAGED PR  FPS+VGR       R     MD       H D                         V++WE +E++W H+    L+V   +HP+L+++ PFNT  +R K T
Sbjct:   21 VGFAGEDAPRTVFPSIVGR------PRHRGVGMD-------HIDALVGNEALQKRGILRMKFPLEPDGIVSNWEDMEKIWHHSFHEELRVPPEEHPVLLTQPPFNTKANREKMT 121          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A2G5B422_COERN (Actin/actin-like protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B422_COERN)

HSP 1 Score: 61.2 bits (147), Expect = 8.730e-8
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 0
Query:    2 GFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMK 112
            GFAGED P+AYFPS VG I      +  Q  +  T      PD                         V DW++ E++WEHA +++L V   +HP++V+E  +NTS  R K
Sbjct:   24 GFAGEDLPKAYFPSHVGYI-----GKMRQFFVGDTESSVWRPDMEIGGPLEHGL--------------VKDWDIYEKIWEHAFKSQLHVNPEEHPVMVNEAAWNTSELRSK 115          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A804K841_MUSAM (Uncharacterized protein n=3 Tax=Musa TaxID=4640 RepID=A0A804K841_MUSAM)

HSP 1 Score: 61.2 bits (147), Expect = 8.940e-8
Identity = 37/118 (31.36%), Postives = 54/118 (45.76%), Query Frame = 0
Query:    2 GFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTA--DQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTP-----VTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMK 112
            G+AGED P+A FPS VG I  + AT  ++ E DS +  D                             +P     V DW++++ +W HA   RL +   +HP+L++E  FNT   R K
Sbjct:   22 GYAGEDAPKAVFPSAVGSIYQAGATDEVKHEKDSDSMYDSENADKIKTRKLYVGTQALGYRRDHMEVISPIKDGVVVDWDIVDNIWNHAFRERLLIDPKEHPMLLAEPSFNTPQQREK 139          
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Match: A0A484MHD6_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MHD6_9ASTE)

HSP 1 Score: 60.5 bits (145), Expect = 1.520e-7
Identity = 37/114 (32.46%), Postives = 52/114 (45.61%), Query Frame = 0
Query:    1 MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSXXXXXXXXXXXXXXXXXXXXTTPVTDWELLERVWEHAAETRLKVRLTDHPILVSEKPFNTSHDRMKYT 114
            +GFAGED PR  FPS+VGR       R     MD       H D                         V++WE +E++W H+    L+V   +HP+L+++ PFNT  +R K T
Sbjct:   21 VGFAGEDAPRTLFPSIVGR------PRHRGVGMD-------HIDALVGNEALQKRGILSMKFPLEPDGIVSNWEDMEKIWHHSFHEELRVPPEEHPVLLTQPPFNTKANREKMT 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5411.12854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHI8_ECTSI3.660e-2336.78Protein binding protein, putative n=2 Tax=Ectocarp... [more]
A0A6H5KHN4_9PHAE5.130e-2035.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TUS4_9STRA1.450e-1032.74Actin related protein n=2 Tax=Monodopsidaceae TaxI... [more]
A0A7S2X9A3_9EUKA2.480e-831.53Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A833QU34_9POAL2.610e-833.86Actin-related protein 4 n=1 Tax=Carex littledalei ... [more]
ARP4A_ARATH2.770e-833.05Actin-related protein 4A n=5 Tax=Arabidopsis thali... [more]
A0A484N0X4_9ASTE3.370e-832.46Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]
A0A2G5B422_COERN8.730e-834.23Actin/actin-like protein n=1 Tax=Coemansia reversa... [more]
A0A804K841_MUSAM8.940e-831.36Uncharacterized protein n=3 Tax=Musa TaxID=4640 Re... [more]
A0A484MHD6_9ASTE1.520e-732.46Uncharacterized protein n=1 Tax=Cuscuta campestris... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004000Actin familyPFAMPF00022Actincoord: 1..113
e-value: 9.2E-15
score: 54.1
IPR004000Actin familyPANTHERPTHR11937ACTINcoord: 1..114
NoneNo IPR availableGENE3D3.30.420.40coord: 1..126
e-value: 3.8E-19
score: 70.9
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5411contigH-paniculata_contig5411:2891..5863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5411.12854.1mRNA_H-paniculata_contig5411.12854.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5411 2842..6859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5411.12854.1 ID=prot_H-paniculata_contig5411.12854.1|Name=mRNA_H-paniculata_contig5411.12854.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=181bp
MGFAGEDFPRAYFPSVVGRIVDSEATRRLQAEMDSTADQHRHPDGSSSSS
SSNKGKSPSKRKRTETTTPVTDWELLERVWEHAAETRLKVRLTDHPILVS
EKPFNTSHDRMKYTVRQEKLESMNKKTLPSSLCRTFPNFKIGASTTSNPP
DTSSVGFTLSYSETWRSMGETPAAMLSEQL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004000Actin