prot_H-paniculata_contig5405.12844.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 75.5 bits (184), Expect = 3.430e-14 Identity = 42/78 (53.85%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSAF 72
M++E L ENGTW+ D LP GRKA KWIFK KL+EDG V RYKARLVAQGF + + APV R F
Sbjct: 13 MDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTF 87
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A075B0V5_ROZAC (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B0V5_ROZAC) HSP 1 Score: 74.7 bits (182), Expect = 6.520e-14 Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFKFLK------TSAPVARMSA 71
M+ E+ L+ NGTWE L LP RKA +KW+FK+K NE G V +YKARLVAQGFK +K T +PVA++++
Sbjct: 118 MQAEYNALMSNGTWE---LMELPPDRKAIGSKWVFKTKYNERGEVEKYKARLVAQGFKQVKGVDYEETFSPVAKLNS 191
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR) HSP 1 Score: 73.9 bits (180), Expect = 1.190e-13 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARM 69
M EE R +V+N TW+ D LP G++A KW++K+K NEDG+V +YKARLVA+G+ F +T APVARM
Sbjct: 1 MNEEMRSIVKNRTWQLVD---LPTGKEAIGLKWVYKTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARM 72
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A5D3DP15_CUCME (Copia-like protein n=3 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DP15_CUCME) HSP 1 Score: 73.6 bits (179), Expect = 1.680e-13 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSAF 72
M EE + L +N TW D+ LP G+K KW++K K N DGTV RYKARLVA+GF + +T APVA+M+ F
Sbjct: 598 MNEELKALEQNNTW---DMVELPKGKKPVGCKWVYKIKYNSDGTVERYKARLVAKGFTQTYGIDYQETFAPVAKMNTF 672
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2N9GXG4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GXG4_FAGSY) HSP 1 Score: 72.4 bits (176), Expect = 4.300e-13 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSA 71
M+EE+ L++ GTW DL LPAG+ A KW++K K DGTV RYKARLVA+GF + +T APVAR+S+
Sbjct: 563 MKEEFDALLKTGTW---DLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSS 636
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2N9G901_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9G901_FAGSY) HSP 1 Score: 72.4 bits (176), Expect = 4.320e-13 Identity = 39/77 (50.65%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSA 71
M+EE+ L++ GTW DL LPAG+ A KW++K K DGTV RYKARLVA+GF + +T APVAR+S+
Sbjct: 809 MKEEFDALLKTGTW---DLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSS 882
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A6D2J305_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J305_9BRAS) HSP 1 Score: 67.8 bits (164), Expect = 5.730e-13 Identity = 40/82 (48.78%), Postives = 47/82 (57.32%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFKFLK------TSAPVARMSAFTYCF 76
M E L EN TW ED LP G++A KW++K K N DGT+ RYKARLVA G K ++ T APVARM CF
Sbjct: 1 MGSEVEALEENNTWTLED---LPPGKRAIGCKWVYKIKYNADGTIERYKARLVALGNKQIEGEDYGETFAPVARMGT-VVCF 78
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2N9GAS0_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GAS0_FAGSY) HSP 1 Score: 71.6 bits (174), Expect = 7.930e-13 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSA 71
M+EE L++ GTW DL LPAG+ A KW++K K DGTV RYKARLVA+GF + +T APVAR+S+
Sbjct: 272 MKEELDALLKTGTW---DLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYKETFAPVARLSS 345
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2N9EXK8_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EXK8_FAGSY) HSP 1 Score: 71.6 bits (174), Expect = 8.030e-13 Identity = 40/77 (51.95%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSA 71
M+EE L++ GTW DL LPAG A KW+FK K DGTV RYKARLVA+GF + +T APVAR+S+
Sbjct: 602 MKEELDALLKTGTW---DLVDLPAGNSAIGCKWVFKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSS 675
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Match: A0A2N9FGF7_FAGSY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FGF7_FAGSY) HSP 1 Score: 71.6 bits (174), Expect = 8.030e-13 Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 0
Query: 1 MEEEWRVLVENGTWEREDLGRLPAGRKATCTKWIFKSKLNEDGTVARYKARLVAQGFK------FLKTSAPVARMSA 71
M+EE L++ GTW DL LPAG+ A KW++K K DGTV RYKARLVA+GF + +T APVAR+S+
Sbjct: 656 MKEELDALLKTGTW---DLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYKETFAPVARLSS 729 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5405.12844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5405.12844.1 ID=prot_H-paniculata_contig5405.12844.1|Name=mRNA_H-paniculata_contig5405.12844.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bpback to top |