prot_H-paniculata_contig54.12832.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig54.12832.1
Unique Nameprot_H-paniculata_contig54.12832.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
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BLAST of mRNA_H-paniculata_contig54.12832.1 vs. uniprot
Match: D7FIA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIA2_ECTSI)

HSP 1 Score: 179 bits (455), Expect = 2.990e-55
Identity = 97/155 (62.58%), Postives = 115/155 (74.19%), Query Frame = 0 
Query:    1 MEDCQAAVTHVRSQTVAVRKTAAEYLKGDLLRGERQTNGDPKWPAILGSFHVAANQVAELVEEVDPVLSYFAYQPLRATAKPGDIPTFLSTKLLPRNDGELLEKRDSSKRAQEEENSHMEDVARFNNSLVDISTSYQ--AAADNLLRELGPPSGA 153
            ME C AAVTHVRS+  A+RKT +EYLKG+LLRGER TNGDPKWP+IL SF VAANQV EL EEVDPVL++FAYQPLRATAKPGDIP FLSTKL+PR+D     KRD          SH+E V +FN+S+ DIS  +     AD++L +L   SG+
Sbjct:    1 MEHCNAAVTHVRSKAAAIRKTTSEYLKGELLRGERLTNGDPKWPSILSSFDVAANQVVELAEEVDPVLNFFAYQPLRATAKPGDIPMFLSTKLMPRSDSA---KRDERSEGSVGSRSHIEAVEQFNDSVDDISNFFNDSVGADDVLSKLVSLSGS 152
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BLAST of mRNA_H-paniculata_contig54.12832.1 vs. uniprot
Match: A0A835YKI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.900e-19
Identity = 57/161 (35.40%), Postives = 88/161 (54.66%), Query Frame = 0 
Query:    1 MEDCQAAVTHVRSQTVAVRKTAAEYLKGDLLRGERQTNGDPKWPAILGSFHVAANQVAELVEEVDPVLSYFAYQPLRATAKPGDIPTFLSTKLLPRNDGELLEKRDSSKRAQEEENSHM--------EDVAR-FNNSLVDISTSYQAAADNLLRELGPPSG 152
            ME    A+  VR+Q  A+R T   +++ +L     + NG+P WP ++ SF V A Q+A+L E+VDPVL +FA+QP+R TA P  IP FLST+ L   D    + R + +  +E E +          EDVA  +N ++     +Y+ A+  +L  +   SG
Sbjct:    1 MESSIPALNAVRNQANAIRTTLTHHIEREL-----RMNGNPSWPELINSFQVVARQLADLAEDVDPVLQFFAFQPVRPTANPAHIPLFLSTRPLAEMDAADAKLR-ACREGKEGEGAGAASGGAAAGEDVAETYNTAVQSAEDAYEKASQAVLASITAASG 155
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig54.12832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIA2_ECTSI2.990e-5562.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKI8_9STRA6.900e-1935.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig54contigH-paniculata_contig54:16908..19911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig54.12832.1mRNA_H-paniculata_contig54.12832.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig54 16413..19936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig54.12832.1 ID=prot_H-paniculata_contig54.12832.1|Name=mRNA_H-paniculata_contig54.12832.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MEDCQAAVTHVRSQTVAVRKTAAEYLKGDLLRGERQTNGDPKWPAILGSF
HVAANQVAELVEEVDPVLSYFAYQPLRATAKPGDIPTFLSTKLLPRNDGE
LLEKRDSSKRAQEEENSHMEDVARFNNSLVDISTSYQAAADNLLRELGPP
SGARS*
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