prot_H-paniculata_contig53968.12822.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53968.12822.1
Unique Nameprot_H-paniculata_contig53968.12822.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length96
Homology
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BLAST of mRNA_H-paniculata_contig53968.12822.1 vs. uniprot
Match: A0A5E4GCQ9_PRUDU (PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GCQ9_PRUDU)

HSP 1 Score: 50.1 bits (118), Expect = 4.710e-5
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0 
Query:   16 NMWVSDSGASNHMTNNLAKMYDLRKPVAGEDVVILGDGSILVVDLVGKLDLILHSTTDVPATLEVSYLPELNFNLFSLHK 95
            N+W++DSGASNH+T N++ +     P  G + + +GDG+ L +   G    ILH++      L V + P++  NL S+HK
Sbjct:   23 NIWLADSGASNHVTLNMSNLCH-SSPYTGSETLRVGDGNSLPISNTGST--ILHTSNAKFHLLNVLHTPQVAHNLLSVHK 99
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53968.12822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5E4GCQ9_PRUDU4.710e-536.25PREDICTED: poly n=1 Tax=Prunus dulcis TaxID=3755 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53968contigH-paniculata_contig53968:10..297 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53968.12822.1mRNA_H-paniculata_contig53968.12822.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53968 10..297 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53968.12822.1 ID=prot_H-paniculata_contig53968.12822.1|Name=mRNA_H-paniculata_contig53968.12822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp
LPVALTTQNPNINNGNMWVSDSGASNHMTNNLAKMYDLRKPVAGEDVVIL
GDGSILVVDLVGKLDLILHSTTDVPATLEVSYLPELNFNLFSLHKI
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