prot_H-paniculata_contig53801.12810.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53801.12810.1
Unique Nameprot_H-paniculata_contig53801.12810.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length135
Homology
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A8F0F7J2_9PHAE (CF1 subunit epsilon n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7J2_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.890e-80
Identity = 127/134 (94.78%), Postives = 133/134 (99.25%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRFFEA 134
            MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDS+WTPIIVLGGFAVVKNDEVIVLISGVEEIKKQ+Y +AKELL+QATKDYDFAKTTKEKIDASQNIKIAASRLQA+RFFE+
Sbjct:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSIWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQEYIQAKELLAQATKDYDFAKTTKEKIDASQNIKIAASRLQAYRFFES 134          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A0R6M4U2_UNDPI (ATP synthase epsilon chain, chloroplastic n=28 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6M4U2_UNDPI)

HSP 1 Score: 203 bits (517), Expect = 2.510e-65
Identity = 109/134 (81.34%), Postives = 121/134 (90.30%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRFFEA 134
            MSL I VIAPDGLIWDT++DEVVLPSLTGQLGIL GHAPLITALEIGILR KV+S WTPIIVLGGFAV+KNDEVIVLISGVEEI KQDY EAKE L+ ATK+ D A+TTKEKIDASQ +KIA+S+LQAF+F E+
Sbjct:    1 MSLNIRVIAPDGLIWDTSSDEVVLPSLTGQLGILTGHAPLITALEIGILRIKVNSSWTPIIVLGGFAVIKNDEVIVLISGVEEIVKQDYAEAKEFLATATKNLDLAETTKEKIDASQEMKIASSKLQAFKFIES 134          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A6B9TNY3_SARFS (ATP synthase epsilon chain, chloroplastic n=13 Tax=Sargassum TaxID=3015 RepID=A0A6B9TNY3_SARFS)

HSP 1 Score: 202 bits (514), Expect = 7.190e-65
Identity = 108/131 (82.44%), Postives = 119/131 (90.84%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRF 131
            MSL I VIAPDGLIWDT  DEVVLPSLTGQLGIL GHAPLITALEIGILR KV S WTPIIVLGGFAV+KNDEV+VLISGVEE+ KQ+Y++AKELL+QATK+ D AKTTKEKIDASQ +KIA+SRLQAF+F
Sbjct:    1 MSLNIRVIAPDGLIWDTKVDEVVLPSLTGQLGILKGHAPLITALEIGILRIKVKSSWTPIIVLGGFAVIKNDEVVVLISGVEEMSKQEYSQAKELLNQATKNLDLAKTTKEKIDASQEMKIASSRLQAFQF 131          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A2R4QPW4_9PHAE (ATP synthase CF1 epsilon chain n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPW4_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.450e-64
Identity = 107/131 (81.68%), Postives = 121/131 (92.37%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRF 131
            MSL I VIAPDGLIWDT ADEV+LPSLTGQLG+L GHAPLITALEIGILR KV+  WTPIIVLGGFAV+KNDEVIVLISGVE+++KQDY+EAKELL++ATK+ D AKTTKEKIDASQ +KIA+SRLQAF+F
Sbjct:    1 MSLNIRVIAPDGLIWDTIADEVILPSLTGQLGLLKGHAPLITALEIGILRIKVNLSWTPIIVLGGFAVIKNDEVIVLISGVEKMEKQDYSEAKELLAKATKNLDLAKTTKEKIDASQEMKIASSRLQAFQF 131          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A8F0FAV9_9PHAE (CF1 subunit epsilon n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAV9_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.060e-64
Identity = 108/134 (80.60%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRFFEA 134
            MSL I VIAPDGLIWDTT DEVVLPSLTGQLGIL GHAPLITALEIGILR KV+S WTPIIVLGGFAV+KNDEVIVLISG EEI K+DY++ KE L+Q+TK+   AKTTKEKIDASQ+IKIA+SRLQAF+F E+
Sbjct:    1 MSLNIRVIAPDGLIWDTTTDEVVLPSLTGQLGILTGHAPLITALEIGILRIKVNSSWTPIIVLGGFAVIKNDEVIVLISGFEEIIKKDYDQTKEFLTQSTKNLAVAKTTKEKIDASQDIKIASSRLQAFKFLES 134          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A8E5XRI3_9PHAE (ATP synthase epsilon chain, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI3_9PHAE)

HSP 1 Score: 199 bits (506), Expect = 1.190e-63
Identity = 108/133 (81.20%), Postives = 121/133 (90.98%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRFFE 133
            MSL I VIAPDGLIWDT ADEVVLPSLTGQLGIL  HAPLITALEIGILR KV+S WTPIIVLGGFAVVK++EVIVLISGVEE+ K+DY++AKELL+QATKD + AKTTKEKI+ASQ+IK A+SRLQAF+F E
Sbjct:    1 MSLTIRVIAPDGLIWDTNADEVVLPSLTGQLGILADHAPLITALEIGILRIKVNSGWTPIIVLGGFAVVKSNEVIVLISGVEEVLKEDYSQAKELLAQATKDLELAKTTKEKIEASQDIKRASSRLQAFQFLE 133          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: ATPE_PYLLI (ATP synthase epsilon chain, chloroplastic n=4 Tax=Ectocarpales TaxID=2877 RepID=ATPE_PYLLI)

HSP 1 Score: 182 bits (462), Expect = 5.620e-57
Identity = 96/131 (73.28%), Postives = 116/131 (88.55%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRF 131
            MSL I VIAPDGLIWDTTA+ VVLPSLTGQLGIL GHAPLIT+LEIGILR K +S WTPIIVLGGFAV+K+DEV+VLISGVEE+ K+DY++AK +L++A  D D AKTTKE IDASQ +KIA+++++AF+F
Sbjct:    1 MSLNIRVIAPDGLIWDTTAEGVVLPSLTGQLGILTGHAPLITSLEIGILRIKTNSKWTPIIVLGGFAVIKDDEVLVLISGVEEVIKEDYSKAKSILAKAKIDLDSAKTTKEIIDASQELKIASAKVKAFKF 131          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A7T8G5D8_SCYLO (ATP synthase epsilon chain, chloroplastic n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5D8_SCYLO)

HSP 1 Score: 150 bits (378), Expect = 3.410e-44
Identity = 83/131 (63.36%), Postives = 97/131 (74.05%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRF 131
            MSL I VIAPDGL+WDTTAD VVLPSLTGQLGIL GHAPLIT+LEIGILR KV+S WTPIIVLGGFAV+ NDE+ VLISGVEE+ K DY +AKE+L                       KIA+++++AF+F
Sbjct:    1 MSLNIRVIAPDGLVWDTTADGVVLPSLTGQLGILTGHAPLITSLEIGILRIKVNSKWTPIIVLGGFAVIMNDEIQVLISGVEEVVKDDYAKAKEILXXXXXXXXXXXXXXXXXXXXXXXKIASAKVKAFKF 131          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A514CQ03_9STRA (ATP synthase epsilon chain, chloroplastic n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A514CQ03_9STRA)

HSP 1 Score: 149 bits (376), Expect = 6.870e-44
Identity = 79/131 (60.31%), Postives = 103/131 (78.63%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKTTKEKIDASQNIKIAASRLQAFRF 131
            MSL I VI PD ++W+TTA+E +LPS TGQLGIL  HA LITALEIG+LR +VD+ WTP+++LGGFA V+NDEV VL++GVEEIK+ D N A+  L +A+   + AKT +EKIDASQN+K  ++R+QA  F
Sbjct:    1 MSLTIRVITPDKIVWNTTAEEAILPSTTGQLGILTSHASLITALEIGVLRIRVDNNWTPMVLLGGFAEVENDEVTVLVNGVEEIKEGDINAARAELEKASLILENAKTDREKIDASQNLKRISARVQALTF 131          
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Match: A0A7S6U9U1_9STRA (ATP synthase epsilon chain, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U1_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.030e-43
Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 0
Query:    1 MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILRTKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQATKDYDFAKT-TKEKIDASQNIKIAASRLQAFRFF 132
            M +KI V+APD  IWDT  DEVVLP L GQ+G+L GHAPLIT+LEIGILR K+ S W PIIV GGFAV+KNDEVI LISG EEI + +Y++AK++L Q TKD     T TKEKI+ SQ++K A +R++A+ FF
Sbjct:    1 MGVKIRVMAPDRSIWDTEVDEVVLPGLNGQIGVLPGHAPLITSLEIGILRIKLGSSWEPIIVFGGFAVIKNDEVIALISGAEEIIRGEYDKAKQILKQ-TKDLLLNITDTKEKIEVSQDVKRAKARVEAYDFF 132          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53801.12810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7J2_9PHAE2.890e-8094.78CF1 subunit epsilon n=1 Tax=Protohalopteris sp. Ta... [more]
A0A0R6M4U2_UNDPI2.510e-6581.34ATP synthase epsilon chain, chloroplastic n=28 Tax... [more]
A0A6B9TNY3_SARFS7.190e-6582.44ATP synthase epsilon chain, chloroplastic n=13 Tax... [more]
A0A2R4QPW4_9PHAE1.450e-6481.68ATP synthase CF1 epsilon chain n=3 Tax=Fucaceae Ta... [more]
A0A8F0FAV9_9PHAE2.060e-6480.60CF1 subunit epsilon n=1 Tax=Desmarestia aculeata T... [more]
A0A8E5XRI3_9PHAE1.190e-6381.20ATP synthase epsilon chain, chloroplastic n=1 Tax=... [more]
ATPE_PYLLI5.620e-5773.28ATP synthase epsilon chain, chloroplastic n=4 Tax=... [more]
A0A7T8G5D8_SCYLO3.410e-4463.36ATP synthase epsilon chain, chloroplastic n=4 Tax=... [more]
A0A514CQ03_9STRA6.870e-4460.31ATP synthase epsilon chain, chloroplastic n=1 Tax=... [more]
A0A7S6U9U1_9STRA2.030e-4362.41ATP synthase epsilon chain, chloroplastic n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availablePANTHERPTHR13822:SF9coord: 1..128
NoneNo IPR availablePRODOMPD000944coord: 19..83
e-value: 4.0E-20
score: 236.0
IPR001469ATP synthase, F1 complex, delta/epsilon subunitTIGRFAMTIGR01216TIGR01216coord: 3..129
e-value: 4.1E-30
score: 102.4
IPR001469ATP synthase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 1..128
IPR001469ATP synthase, F1 complex, delta/epsilon subunitHAMAPMF_00530ATP_synth_epsil_baccoord: 1..128
score: 20.629
IPR020546ATP synthase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 3..78
e-value: 2.6E-22
score: 78.5
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalGENE3D2.60.15.10coord: 1..128
e-value: 5.8E-25
score: 89.6
IPR036771F0F1 ATP synthase delta/epsilon subunit, N-terminalSUPERFAMILY51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 1..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53801contigH-paniculata_contig53801:635..1039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53801.12810.1mRNA_H-paniculata_contig53801.12810.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53801 635..1039 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53801.12810.1 ID=prot_H-paniculata_contig53801.12810.1|Name=mRNA_H-paniculata_contig53801.12810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=135bp
MSLKICVIAPDGLIWDTTADEVVLPSLTGQLGILVGHAPLITALEIGILR
TKVDSVWTPIIVLGGFAVVKNDEVIVLISGVEEIKKQDYNEAKELLSQAT
KDYDFAKTTKEKIDASQNIKIAASRLQAFRFFEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001469ATP_synth_F1_dsu/esu
IPR020546ATP_synth_F1_dsu/esu_N
IPR036771ATPsynth_dsu/esu_N