prot_H-paniculata_contig53790.12807.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig53790.12807.1
Unique Nameprot_H-paniculata_contig53790.12807.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length180
Homology
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM)

HSP 1 Score: 152 bits (383), Expect = 5.080e-42
Identity = 75/172 (43.60%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLI 175
            KRI +YL T  DL + F G + G  +G + DA+WA D++ R+STTGY+F LNG AIS +S++Q   A SSTE EY+A     +E V+LR+LL  +G  C  +TT F+DN+  I L+K    H RTKHI +++H +RE + + V+ L+Y  T + +AD  TK L+R + ++ +
Sbjct:  135 KRILKYLKTTQDLGLVFNGGTKGELIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQFL 305          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE)

HSP 1 Score: 150 bits (380), Expect = 7.660e-42
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 174
            KR+ RYL   P+  + F  +  G  +  + DADWA D+E R+ST+GY+F +NG  IS +S+KQ+  A SSTE EY+A  E  KE V+L+  LG +G     E+  +FEDN+ +I L+K    H RTKHI +R+H +RE +  G + L+Y  T D LAD++TK ++ VQF+ L
Sbjct:   78 KRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESL 248          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A176WI96_MARPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WI96_MARPO)

HSP 1 Score: 155 bits (392), Expect = 1.370e-41
Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGR------FVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSI-GFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 174
            KRI+RYL    DL++ +      H  G+      F DADWA D+ DRKSTTGYIF L G  I+  SRKQ   A SSTE EY+A  E  KE V+LR LLG I     + STT+  DN+ ++NL++    H RTKHI VR H IRE I  G + L YV T +QLADILTK L ++ F+RL
Sbjct:  330 KRIYRYLRGTSDLALLYRRGEETHLQGKDTQLQVFTDADWAADMHDRKSTTGYIFFLRGTPITWNSRKQPTVALSSTESEYMAVTEGAKEAVWLRRLLGKIHALDLQASTTIHGDNQGSLNLAQNPIYHGRTKHIEVRHHFIREKIASGEINLAYVSTNEQLADILTKPLGKIAFERL 507          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM)

HSP 1 Score: 158 bits (399), Expect = 1.890e-41
Identity = 80/169 (47.34%), Postives = 106/169 (62.72%), Query Frame = 0
Query:    5 RIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQR 173
            R F+YL    D  + F GK      G +VDADWA DV DR+S +GY F L G A+S  S+KQ   A SSTE EY+AA    KE  +LR  LG IG  C+ +T L  DN+SA+ +++    H RTKHI VR+H +RE +  G + L+YV TGDQ+AD+LTKGL + +  +
Sbjct:  960 RAFKYLRGTADYQLVFDGKKPWELTG-YVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 152 bits (385), Expect = 2.110e-41
Identity = 75/172 (43.60%), Postives = 112/172 (65.12%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLI 175
            KRI +YL T  DL + F G + G  +G + DA WA D++ R+STTGY+F LNG AIS +S++Q   A SSTE EY+A     +E V+LR+LL  +G  C  +TT+F+DN+  I L+K    H RTKHI +++H +RE + + V+ L+Y  T + +AD  TK L+R + ++ +
Sbjct:  231 KRILKYLKTTQDLGLVFNGGTKGELIG-YADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQFL 401          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM)

HSP 1 Score: 147 bits (371), Expect = 3.280e-41
Identity = 74/172 (43.02%), Postives = 110/172 (63.95%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 174
            KR+ RYL   P   + F  + +  G+  + DADWA D+E R+ST+GY F +NG  IS RS+KQ+  A SSTE EY+A  E  +E V+L+  L  +G     E+  +++DN+ +I L+K    H RTKHI +R+H +RE + +G + L+Y+ T D LADI+TK ++ VQF+ L
Sbjct:   48 KRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTKAITAVQFRVL 218          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM)

HSP 1 Score: 145 bits (367), Expect = 3.280e-41
Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 174
            KR+FRY+       I F    N  GL  + DADWA D+E R+ST+GY F +NG  IS RS+KQ+  A SSTE EY+A  E  +E V+L+  L  +G     E+  ++EDN+ +I L+K    H RTKHI +R+H +RE + +G + L+YV T D LAD++TK +   QF  L
Sbjct:    1 KRVFRYIQGTKTHGIEFQASCND-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQFHVL 171          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.510e-41
Identity = 72/173 (41.62%), Postives = 111/173 (64.16%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLIN 176
            KRI +YL T  D+ + F G   G  +G + DA+WA D++ R+STTGY+F LNG AIS +S++Q   A SSTE EY+A     +E V+LR+LL  +G+  + +TT+++DN+  I L+K    H RTKHI +++H +RE +    + L+Y  T + +AD  TK L+R +  + +N
Sbjct:   63 KRILKYLKTTQDVGLVFNGGIKGELVG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALARDKHNKFVN 234          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM)

HSP 1 Score: 147 bits (372), Expect = 2.570e-40
Identity = 75/172 (43.60%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 174
            KR+ RYL   P   + F  + +  G+  + DADWA D+E R+ST+GY F +NG  IS RS+KQ+  A SSTE EY+A  E  +E V+L+  L  +G     E+  ++EDN+ +I L+K    H RTKHI +R+H +RE + +G + L+YV T D LAD++TK ++ VQF  L
Sbjct:  118 KRVLRYLQATPTHGLEFS-REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFSVL 288          
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE)

HSP 1 Score: 144 bits (362), Expect = 3.450e-40
Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 0
Query:    4 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLINL 177
            KRIF+YL     L + +  KS    L  + DADW  DV++ +STTGYIF++ G A+S +S++Q   A S+ E EY+A     +E V++REL   +       TT+FEDN+SAI+++K    H R KHIG+++H IRE +    + +KY +T D +ADI TKGL+  +F+RL +L
Sbjct:    4 KRIFQYLRGTSHLGLLYN-KSEDTSLVGYSDADWGGDVDNYRSTTGYIFQIGGVAVSWKSKRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFERLRSL 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB69_PHYRM5.080e-4243.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A090C2V0_HYAAE7.660e-4244.19RxLR effector candidate protein (Fragment) n=3 Tax... [more]
A0A176WI96_MARPO1.370e-4150.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y9ZY34_9AGAM1.890e-4147.34Integrase catalytic domain-containing protein n=1 ... [more]
H3GB17_PHYRM2.110e-4143.60Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G656_PHYRM3.280e-4143.02Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
H3G5T8_PHYRM3.280e-4144.19Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A2P4XPH2_9STRA3.510e-4141.62RxLR effector candidate protein (Fragment) n=1 Tax... [more]
H3GB71_PHYRM2.570e-4043.60Uncharacterized protein n=5 Tax=Phytophthora ramor... [more]
A0A1X7SFX4_AMPQE3.450e-4042.53Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 3..171
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 3..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig53790contigH-paniculata_contig53790:633..1172 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig53790.12807.1mRNA_H-paniculata_contig53790.12807.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig53790 633..1172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig53790.12807.1 ID=prot_H-paniculata_contig53790.12807.1|Name=mRNA_H-paniculata_contig53790.12807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp
STCKRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGY
IFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGF
GCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALK
YVQTGDQLADILTKGLSRVQFQRLINLLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like