mRNA_H-paniculata_contig53790.12807.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 152 bits (383), Expect = 5.080e-42 Identity = 75/172 (43.60%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLI 525
KRI +YL T DL + F G + G +G + DA+WA D++ R+STTGY+F LNG AIS +S++Q A SSTE EY+A +E V+LR+LL +G C +TT F+DN+ I L+K H RTKHI +++H +RE + + V+ L+Y T + +AD TK L+R + ++ +
Sbjct: 135 KRILKYLKTTQDLGLVFNGGTKGELIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQFL 305
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A090C2V0_HYAAE (RxLR effector candidate protein (Fragment) n=3 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=A0A090C2V0_HYAAE) HSP 1 Score: 150 bits (380), Expect = 7.660e-42 Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 522
KR+ RYL P+ + F + G + + DADWA D+E R+ST+GY+F +NG IS +S+KQ+ A SSTE EY+A E KE V+L+ LG +G E+ +FEDN+ +I L+K H RTKHI +R+H +RE + G + L+Y T D LAD++TK ++ VQF+ L
Sbjct: 78 KRVLRYLQATPNHGLEFT-REEGSRICGYTDADWAGDIESRRSTSGYVFMMNGGCISWKSQKQRTVALSSTEAEYMALSEATKEAVWLKVFLGELGEMTSDEAIKMFEDNQGSIALAKNPEFHKRTKHIDIRYHFVREKVESGEVILEYCSTQDMLADMMTKPIAAVQFESL 248
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A176WI96_MARPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WI96_MARPO) HSP 1 Score: 155 bits (392), Expect = 1.370e-41 Identity = 89/178 (50.00%), Postives = 110/178 (61.80%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGR------FVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSI-GFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 522
KRI+RYL DL++ + H G+ F DADWA D+ DRKSTTGYIF L G I+ SRKQ A SSTE EY+A E KE V+LR LLG I + STT+ DN+ ++NL++ H RTKHI VR H IRE I G + L YV T +QLADILTK L ++ F+RL
Sbjct: 330 KRIYRYLRGTSDLALLYRRGEETHLQGKDTQLQVFTDADWAADMHDRKSTTGYIFFLRGTPITWNSRKQPTVALSSTESEYMAVTEGAKEAVWLRRLLGKIHALDLQASTTIHGDNQGSLNLAQNPIYHGRTKHIEVRHHFIREKIASGEINLAYVSTNEQLADILTKPLGKIAFERL 507
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 158 bits (399), Expect = 1.890e-41 Identity = 80/169 (47.34%), Postives = 106/169 (62.72%), Query Frame = 1
Query: 13 RIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQR 519
R F+YL D + F GK G +VDADWA DV DR+S +GY F L G A+S S+KQ A SSTE EY+AA KE +LR LG IG C+ +T L DN+SA+ +++ H RTKHI VR+H +RE + G + L+YV TGDQ+AD+LTKGL + + +
Sbjct: 960 RAFKYLRGTADYQLVFDGKKPWELTG-YVDADWAGDVNDRRSISGYTFLLAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAKHDK 1127
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM) HSP 1 Score: 152 bits (385), Expect = 2.110e-41 Identity = 75/172 (43.60%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLI 525
KRI +YL T DL + F G + G +G + DA WA D++ R+STTGY+F LNG AIS +S++Q A SSTE EY+A +E V+LR+LL +G C +TT+F+DN+ I L+K H RTKHI +++H +RE + + V+ L+Y T + +AD TK L+R + ++ +
Sbjct: 231 KRILKYLKTTQDLGLVFNGGTKGELIG-YADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVAATTIFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALARPKHRQFL 401
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3G656_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G656_PHYRM) HSP 1 Score: 147 bits (371), Expect = 3.280e-41 Identity = 74/172 (43.02%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 522
KR+ RYL P + F + + G+ + DADWA D+E R+ST+GY F +NG IS RS+KQ+ A SSTE EY+A E +E V+L+ L +G E+ +++DN+ +I L+K H RTKHI +R+H +RE + +G + L+Y+ T D LADI+TK ++ VQF+ L
Sbjct: 48 KRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYKDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYISTTDMLADIMTKAITAVQFRVL 218
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3G5T8_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5T8_PHYRM) HSP 1 Score: 145 bits (367), Expect = 3.280e-41 Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 522
KR+FRY+ I F N GL + DADWA D+E R+ST+GY F +NG IS RS+KQ+ A SSTE EY+A E +E V+L+ L +G E+ ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+YV T D LAD++TK + QF L
Sbjct: 1 KRVFRYIQGTKTHGIEFQASCND-GLQGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAIPATQFHVL 171
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 147 bits (372), Expect = 3.510e-41 Identity = 72/173 (41.62%), Postives = 111/173 (64.16%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLIN 528
KRI +YL T D+ + F G G +G + DA+WA D++ R+STTGY+F LNG AIS +S++Q A SSTE EY+A +E V+LR+LL +G+ + +TT+++DN+ I L+K H RTKHI +++H +RE + + L+Y T + +AD TK L+R + + +N
Sbjct: 63 KRILKYLKTTQDVGLVFNGGIKGELVG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALARDKHNKFVN 234
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: H3GB71_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB71_PHYRM) HSP 1 Score: 147 bits (372), Expect = 2.570e-40 Identity = 75/172 (43.60%), Postives = 109/172 (63.37%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIG-FGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRL 522
KR+ RYL P + F + + G+ + DADWA D+E R+ST+GY F +NG IS RS+KQ+ A SSTE EY+A E +E V+L+ L +G E+ ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+YV T D LAD++TK ++ VQF L
Sbjct: 118 KRVLRYLQATPTHGLEFS-REDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFSVL 288
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Match: A0A1X7SFX4_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SFX4_AMPQE) HSP 1 Score: 144 bits (362), Expect = 3.450e-40 Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 1
Query: 10 KRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYIFKLNGDAISLRSRKQQLFAWSSTEVEYVAAGEVGKETVFLRELLGSIGFGCRESTTLFEDNKSAINLSKESGAHCRTKHIGVRWHGIREWIREGVLALKYVQTGDQLADILTKGLSRVQFQRLINL 531
KRIF+YL L + + KS L + DADW DV++ +STTGYIF++ G A+S +S++Q A S+ E EY+A +E V++REL + TT+FEDN+SAI+++K H R KHIG+++H IRE + + +KY +T D +ADI TKGL+ +F+RL +L
Sbjct: 4 KRIFQYLRGTSHLGLLYN-KSEDTSLVGYSDADWGGDVDNYRSTTGYIFQIGGVAVSWKSKRQDCVALSTAEAEYMALASTAQEAVWMRELNADMNNKPNGPTTIFEDNQSAISMAKNPQFHGRAKHIGIKYHFIREQVSTESVQIKYCRTEDMVADIFTKGLTHEKFERLRSL 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53790.12807.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig53790.12807.1 >prot_H-paniculata_contig53790.12807.1 ID=prot_H-paniculata_contig53790.12807.1|Name=mRNA_H-paniculata_contig53790.12807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=180bp STCKRIFRYLSTVPDLSITFGGKSNGHGLGRFVDADWAEDVEDRKSTTGYback to top mRNA from alignment at H-paniculata_contig53790:633..1172- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig53790.12807.1 ID=mRNA_H-paniculata_contig53790.12807.1|Name=mRNA_H-paniculata_contig53790.12807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=540bp|location=Sequence derived from alignment at H-paniculata_contig53790:633..1172- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig53790:633..1172- >mRNA_H-paniculata_contig53790.12807.1 ID=mRNA_H-paniculata_contig53790.12807.1|Name=mRNA_H-paniculata_contig53790.12807.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1080bp|location=Sequence derived from alignment at H-paniculata_contig53790:633..1172- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |