prot_H-paniculata_contig5354.12774.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: D7G1C0_ECTSI (Lissencephaly-1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1C0_ECTSI) HSP 1 Score: 113 bits (283), Expect = 5.810e-28 Identity = 60/72 (83.33%), Postives = 67/72 (93.06%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDR-SGPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
MDLEARL+QAQQDLKSGVRPG+++ +G DRVLPRAPAK L+GHRNPVTCVALHPLYSVVAS+SEDATVKV
Sbjct: 67 MDLEARLDQAQQDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKV 138
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A6H5JKZ3_9PHAE (Ge1_WD40 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKZ3_9PHAE) HSP 1 Score: 110 bits (274), Expect = 1.480e-27 Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDR-SGPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
M+LEARL+QAQ DLKSGVRPG+++ +G DRVLPRAPAK L+GHRNPVTCVALHPLYSVVAS+SEDATVKV
Sbjct: 1 MELEARLDQAQDDLKSGVRPGREKGAGGSDRVLPRAPAKGVLTGHRNPVTCVALHPLYSVVASSSEDATVKV 72
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A7S0SXC9_9STRA (Lissencephaly-1 homolog n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SXC9_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.090e-13 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDRS---------GPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVK 70
M+LE +L Q+ LKSG+ + G +R++P+ PAK SLSGHR PVTC+A HP+YS+VAS SED+T+K
Sbjct: 67 MELETQLNDLQKQLKSGIATNGIENDTLKTNATIGENNRLIPKGPAKASLSGHRGPVTCIATHPIYSLVASGSEDSTIK 145
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: LIS1_BRAFL (Lissencephaly-1 homolog n=2 Tax=Branchiostoma TaxID=7737 RepID=LIS1_BRAFL) HSP 1 Score: 72.0 bits (175), Expect = 5.050e-13 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDRSGPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
MDLEA+L +A+++ +SG K+RS +PR PA+ SLSGHR+P+T V HP+YSV+ SASEDAT+K+
Sbjct: 64 MDLEAKLAEAEKEFQSGGPNKKERSP--SEWIPRPPARYSLSGHRSPITRVLFHPVYSVMVSASEDATIKI 132
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: T1G6J2_HELRO (Lissencephaly-1 homolog n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G6J2_HELRO) HSP 1 Score: 72.0 bits (175), Expect = 5.080e-13 Identity = 37/71 (52.11%), Postives = 53/71 (74.65%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDRSGPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
+DLEARL + +++++ GV PG+DR P D + PR P K SL+GHR VT V HP+++++ SASEDAT+KV
Sbjct: 66 VDLEARLAETEKEIQVGV-PGRDRQNPSDWI-PRPPEKYSLTGHRGSVTRVVFHPVFNIIVSASEDATIKV 134
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A485LG79_9STRA (Lissencephaly-1 homolog n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485LG79_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.180e-13 Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLK-SGVRPGKDRSGPG-DRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
M+LE++++Q ++D K GV +D +G G D LPRAP K S+SGHR+P+T V HP++SVV ++SEDAT+KV
Sbjct: 68 MELESKIQQMEEDAKLGGVVSRRDVTGIGRDAALPRAPPKYSMSGHRSPITSVVFHPIFSVVVTSSEDATIKV 140
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A225W249_9STRA (Lissencephaly-1 homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225W249_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 5.380e-13 Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLK-SGVRPGKDRSGPGDRV--LPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
M+LE ++ Q ++++K GV +D G R LPRAPAK SL+GHR+P+TCVA HP++SV+ S SEDATVKV
Sbjct: 66 MELETKVAQLEENVKLGGVLSRRDVLGARQRTEFLPRAPAKFSLTGHRSPITCVAFHPVFSVLVSGSEDATVKV 139
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A8J9VA17_BRALA (PAFAH1B1 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9VA17_BRALA) HSP 1 Score: 72.0 bits (175), Expect = 5.560e-13 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLKSGVRPGKDRSGPGDRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
MDLEA+L +A+++ +SG K+RS +PR PA+ SLSGHR+P+T V HP+YSV+ SASEDAT+K+
Sbjct: 317 MDLEAKLAEAEKEFQSGGPNKKERSP--SEWIPRPPARYSLSGHRSPITRVLFHPVYSVMVSASEDATIKI 385
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: A0A6A5AET7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AET7_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.010e-13 Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLK-SGVRPGKDRSGPG---DRVLPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
M+LE++++Q ++D K GV +D +G G LPRAP K S+SGHR+P+TCV HP++SVV ++SEDAT+KV
Sbjct: 71 MELESKIQQLEEDSKLGGVVSRRDVTGIGRDPSTFLPRAPPKYSMSGHRSPITCVVFHPVFSVVVTSSEDATIKV 145
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Match: M4BL66_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BL66_HYAAE) HSP 1 Score: 71.6 bits (174), Expect = 7.120e-13 Identity = 40/74 (54.05%), Postives = 54/74 (72.97%), Query Frame = 0
Query: 1 MDLEARLEQAQQDLK-SGVRPGKDRSGPGDRV--LPRAPAKVSLSGHRNPVTCVALHPLYSVVASASEDATVKV 71
M+LE ++ Q ++ K GV +D G R LPR PAK++L+GHR+P+TCVA HP++SV+ASASEDATVKV
Sbjct: 45 MELETKVAQLEETAKLGGVLSRRDVLGARQRAEFLPRVPAKLTLTGHRSPITCVAFHPVFSVLASASEDATVKV 118 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5354.12774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5354.12774.1 ID=prot_H-paniculata_contig5354.12774.1|Name=mRNA_H-paniculata_contig5354.12774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=76bpback to top |