prot_H-paniculata_contig5341.12757.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5341.12757.1
Unique Nameprot_H-paniculata_contig5341.12757.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length919
Homology
BLAST of mRNA_H-paniculata_contig5341.12757.1 vs. uniprot
Match: A0A6H5KD03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD03_9PHAE)

HSP 1 Score: 1011 bits (2615), Expect = 0.000e+0
Identity = 592/992 (59.68%), Postives = 679/992 (68.45%), Query Frame = 0
Query:    1 SYDSINKPRPYWDVAREVVSKGYSMPKKKVVPLLRELCIRIGDNNVCDGAFFGALLAILRSAKDGDWDGKAVRLVHFFIRGMVTAEGDTDGRMLGSYWEGRGITPGQILQAVECFRYESEHRSAVRRIPAFQTMATLCQLAAVAEIGGQPSPVQVLREATVAPLQSFQAQERPERGGK--GRSYRQRLEAFQESLQISSSIFSAVRRCPGLARDRAILPTVLQGCCSENSLAARHSFAVLAEQAAESPAIVSQALLNKAMLLPTTVGMLQAPEGLASSGKEPNLSDALACVYYLRSLKTLAFSEMLDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVDAQRESRDADIFRRVVDRIKLCVEEATSPTTAAASSV-----------PESSISV------DRGNKKRGKVTEAEASGVGAG------GAAGAQCNWALAHAACRVCRVVGRTFQVAISYETIQSQNREQGAAARVTGSPGIFGATAAPATRPSSFNAESNWEGYGGVTPSPS-------SSSAAVVPTEGGGSLDASAG-GSAFNLLGLPPSPPPRSGVVE---------------------------------EQNTAAIRDLCRALRQHKLLESPHLHVRSLALEAMFLLVPDPSPVDPQLRGLWDWLQQRVQQCPSTLPDSVLSELVDTLLTRVHCSAASREQVIPIALALTESFMYQVPSEEMGRCVLRAWCQCVGYGGRARESVLQSVYRLLDRCRENLILLYTDSNGTIGAADVGGAANVEGDGG-GGKKRHVVGAPSEDWTRLMTQPHTSTASATSNSANLSPGKNGSRVGGGSNAENTRGLMLEGNTSILGGEEASRWAPGTNNAGGAQRFSLHFLKARGAATRLKRSAYWFLGEYCGQLSGSVPEPSAQSDIKSDTTLDKNDNDLLGNWSS------SSAGNKFDVGLEGGDAGAVAIPHPVVAAMNGATVSILLRLKHAAMFEDLQVTTDWAS 919
            SY+ +N+PR YW VA EVV+KG +MPKK++VPLLRELCIRIGD  VCDGAFFGALL IL SAK+GDWDGKAVRLVHFF+RGMVT +GDT+GR+LGS+WEGRGIT  QIL A+ECFR ESEHRS+VR+IPAF T+ATLCQLA+V+ +GGQPSPV+VLRE T+ PL+S QAQERPERGGK  GR+ RQR EAF+ESLQ+S++IFSA+RRCP LARD++ILP VL GCCSEN LAARH+FA+LA+ A +SP +VSQ LL+KAML+PTTVGMLQAP GLA+SG EPNL+D+LACVYYLR++K LAF+E LDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLV+AQRESRDADIFRRVVDRIK+CVEEAT+P TAAA++            P S   +      D  NKK+            AG      GA+ A CNWALAHAACRVCRVVGRTFQVAISY+T+Q+QNR     A V GS G      A     SS   E    G  G  P PS       S        +G   +    G GSAFNLLGLPPSP PRSG+                                   +   AAIRDLCRAL+QH+LLESPHLHVRSLALEAMFLLVPDPSP+DPQLRGLWDWLQQRV+QCPSTLPD+VLSELVDTLLTRV CSA SRE+VIPIALALTESFMYQVPSEEMGRCVLRAWCQC GYGGRARESVLQSVYR+LDR     I L  D+     A+     A+    G  GG  RHV G  SEDWTR   QP  ST  A                  G  +E  R                                 L +L+A+ AATRLKRSA+WFLGEYC QL+G+ P  S+Q+  ++        N+LL  W+S           +   GL    A A A  HPVV+ MNGAT+SIL+RLKHAAMFED Q  +  AS
Sbjct:   81 SYELVNRPRAYWTVAAEVVAKGATMPKKRLVPLLRELCIRIGDYTVCDGAFFGALLVILGSAKEGDWDGKAVRLVHFFVRGMVTVQGDTEGRVLGSHWEGRGITQRQILDAIECFRQESEHRSSVRQIPAFHTVATLCQLASVSGVGGQPSPVEVLRETTLTPLRSLQAQERPERGGKTKGRALRQRQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLAASGGEPNLADSLACVYYLRAIKALAFAEALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAATAAHDGSTAASRPGSPTELPPAAPADLSNKKKKLXXXXXXXXXXAGNGPAGVGASEAYCNWALAHAACRVCRVVGRTFQVAISYQTMQNQNR-----AGVDGSSGGSSTVLASPAATSSVGGERRGSGTSGPRP-PSVNARHGFSEGLLASGRDGSQPVTPEVGTGSAFNLLGLPPSPAPRSGITRAPSAWGPTAGXXXXXXXXXXXXXXRRLARDGGRDGRAAAIRDLCRALQQHRLLESPHLHVRSLALEAMFLLVPDPSPLDPQLRGLWDWLQQRVEQCPSTLPDTVLSELVDTLLTRVQCSATSREEVIPIALALTESFMYQVPSEEMGRCVLRAWCQCAGYGGRARESVLQSVYRILDRS----IALPPDNPRAAFASAANNRASTGSVGDRGGAARHVRGMASEDWTR---QP-ISTGGAQ-----------------GDPSETPR---------------------------------LKYLRAKSAATRLKRSAFWFLGEYCRQLTGA-PAESSQNHDQTPPPAKTGGNELLDVWTSPVPSPTKGGMGRLPAGLGDMGAEASAEAHPVVSGMNGATISILMRLKHAAMFEDFQTRSTCAS 1007          
BLAST of mRNA_H-paniculata_contig5341.12757.1 vs. uniprot
Match: D7FJG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJG9_ECTSI)

HSP 1 Score: 987 bits (2552), Expect = 0.000e+0
Identity = 576/935 (61.60%), Postives = 667/935 (71.34%), Query Frame = 0
Query:   25 MPKKKVVPLLRELCIRIGDNNVCDGAFFGALLAILRSAKDGDWDGKAVRLVHFFIRGMVTAEGDTDGRMLGSYWEGRGITPGQILQAVECFRYESEHRSAVRRIPAFQTMATLCQLAAVAEIGGQPSPVQVLREATVAPLQSFQAQERPERGGK--GRSYRQRLEAFQESLQISSSIFSAVRRCPGLARDRAILPTVLQGCCSENSLAARHSFAVLAEQAAESPAIVSQALLNKAMLLPTTVGMLQAPEGLASSGKEPNLSDALACVYYLRSLKTLAFSEMLDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVDAQRESRDADIFRRVVDRIKLCVEEATSPTTAAASSV-----------PESSISV------DRGNKKRGKVTEAE--------ASGVGAGGAAGAQCNWALAHAACRVCRVVGRTFQVAISYETIQSQNREQGAAARVTGSPGIFGATAAPATRPSSFNAESNWEGYGGVTPSPSSSSAAVVPTEGGGSLDASAGGSAFNLLGLPPSPPPRSG-VVEEQNTAAIRDLCRALRQHKLLESPHLHVRSLALEAMFLLVPDPSPVDPQLRGLWDWLQQRVQQCPSTLPDSVLSELVDTLLTRVHCSAASREQVIPIALALTESFMYQVPSEEMGRCVLRAWCQCVGYGGRARESVLQSVYRLLDRCRENLILLYTDSNGTIGAADVGGAANVEGDGG-GGKKRHVVGAPSEDWTRLMTQPHTSTASATSNSANLSPGKNGSRV--GGGSNAENTRGLMLEGNTSILGGEEASRWA-PGTNNAGG--AQRFSLHFLKARGAATRLKRSAYWFLGEYCGQLSGSVPEPSAQSDIKSDTTLDKNDNDLLGNWSS------SSAGNKFDVGLEGGDAGAVAIPHPVVAAMNGATVSILLRLKHAAMFEDLQVTTDWAS 919
            MPKK++VPLLRELCIRIGD  VCDGAFFGALL ILRSAK+GDWDGKAVRLVHFF+RGMVT +GDT+GR+LGS+WEGRGI+P QI+ A+ECFR ESEHRS+VR+IPAF T+ATLCQLA+V+ +GGQPSPV+VLRE T+ PL+S QAQERPERGGK  GR+ RQR EAF+ESLQ+S++IFSA+RRCP LARD++ILP VL GCCSEN LAARH+FA+LA+ A +SP +VSQ LL+KAML+PTTVGMLQAP GLAS+G EPNL+D+LACVYYLR++K LAF+  LDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLV+AQRESRDADIFRRVVDRIK+CVEEAT+P TAAA++            P S   +      D G+KK                 +G    GA+ A CNWALAHAACRVCRVVGRTFQVAI     + +     AAA            AAP           +W+       S  S  AA  P                     P +P   S  VVEEQNTAAIRDLCRAL+QH+LLESPHLHVRSLALEAMFLLVPDPSP+DPQLRGLWDWLQQRV+QCPSTLPD+VLSELVDTLLTRV CSA SRE+VIPIALALTESFMYQVPSEEMGRCVLRAWCQC GYGGRARESVLQSVYR+LDR     I L  D+  T  A+     A+    G  GG  RHV G  SEDWTR   QP  ST  A  +     PG+    +  GGGS+  +     L G + ILGG+EASRW   G   AGG  ++   L +L+ + AATRLKRSA+WFLGEYC QL+G+ P  S+Q+  +S    +   N+LL  W+S           +   GL    A A A  HPVV+ MNGAT+SIL+RLKHAAMFED Q  +  AS
Sbjct:    1 MPKKRLVPLLRELCIRIGDYTVCDGAFFGALLVILRSAKEGDWDGKAVRLVHFFVRGMVTVQGDTEGRVLGSHWEGRGISPRQIIDAIECFRQESEHRSSVRQIPAFHTVATLCQLASVSGVGGQPSPVEVLRETTLTPLRSLQAQERPERGGKTKGRALRQRQEAFEESLQVSAAIFSAIRRCPALARDQSILPPVLLGCCSENHLAARHAFAILADLAMKSPDVVSQTLLSKAMLVPTTVGMLQAPGGLASAGGEPNLADSLACVYYLRAIKALAFAGALDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVNAQRESRDADIFRRVVDRIKVCVEEATAPATAAAAATAAHDGSTAASRPGSPTELPPAAPADLGHKKXXXXXXXXXXXXXXXAGNGPAGVGASEAHCNWALAHAACRVCRVVGRTFQVAIRPCRTKIELVSTAAAA-----------VAAP-----------SWQARLRQQASAESVVAAGPPAR----------------APRPSTPATASRKVVEEQNTAAIRDLCRALQQHRLLESPHLHVRSLALEAMFLLVPDPSPLDPQLRGLWDWLQQRVEQCPSTLPDTVLSELVDTLLTRVQCSATSREEVIPIALALTESFMYQVPSEEMGRCVLRAWCQCAGYGGRARESVLQSVYRILDRS----IALPPDNPRTAFASAANDRASTGSVGDRGGAARHVRGMASEDWTR---QP-ISTGGAQGSEDGSQPGRIPPTIVSGGGSSGSSGFATSLNGVSMILGGDEASRWGNAGGGGAGGDPSETPRLKYLRTKSAATRLKRSAFWFLGEYCCQLTGA-PAESSQNPDQSPPPAETGGNELLDVWTSPVPSPTKGGTGRLPAGLGDMGAEASAEAHPVVSGMNGATISILMRLKHAAMFEDFQTRSTCAS 888          
BLAST of mRNA_H-paniculata_contig5341.12757.1 vs. uniprot
Match: A0A835Z8W3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W3_9STRA)

HSP 1 Score: 188 bits (478), Expect = 3.130e-45
Identity = 185/582 (31.79%), Postives = 233/582 (40.03%), Query Frame = 0
Query:  176 GGKGRSYRQRLEAFQESLQISSSIFSAVRRCPGLARDRAILPTVLQGCCSENSLAARHSFAVLAEQAAE---------------------------------------------------------SPAIVSQALLNKAMLLPTTVGMLQAPEGLASSGKEPNLSDALACVYYLRSLKTLAFSEMLDDTMRLDMYRTMVSSVSDARHRVALEA------------------------------------MQCLLDHPRAWELLVDAQRESRDADIFRRVVDRIKLCVEEATS----PTTAAASSVPESSISVDRGNKKRGKVTEAEASGVGAGG-------------------------------AAGAQCNWALAHAACRVCRVVGRTFQVAISYETIQSQNREQGAAARVTGSPGIFGATAAPATRPSSFNAESNWEGYGGVTPSPSSSSAAVVPTEGGGSLDASAGGSAFNLLGLPPSPPP--------------------RSGVVEEQNTAAIRDLCRALRQHKLLESPHLHVRSLALEAMFLLVPDPSPVDPQLRGLWDWLQQRVQQCPSTLPDSVL 609
            GG  +++R   E  +E L +S  + SAVRR   L R  ++LP VL+ C S N++ ARH+FAVL EQAA                                                           P  V++ +    +L PTTV    A  G      +PNL D LACVYYLR LKTL F+  L+   RLD YRT+ +SVSD RHRVALEA                                    MQCL+DH RAW LLVDAQRESRDAD+FRRVVD ++ C+  A      P  AA                                                                A GA  +W LAHAACR  R VG+T Q AIS+ET+        AA                        +E+ + G G    SPS     V P  GG  L          LL LP +P                       +   E  N AAIRDLCRA+  H  L+ PH H       AMFLLVPDPS  DP+L+ +W  +Q +++ CP++LP++ L
Sbjct:  386 GGGRKAHRGEAEV-KEHLLLSRVVLSAVRRSAALRRRASLLPRVLEACRSPNAVTARHAFAVLLEQAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSMVLAEXXXXXXXXXXXXXXXAMDPKAVAEGVYP--LLQPTTV----AAAGALEIHNQPNLEDPLACVYYLRVLKTLVFAPELEAQSRLDFYRTIANSVSDTRHRVALEASDVFNLNFNPVPHTVAGATAVGSLTAQSWNYRGTAAMQCLMDHERAWTLLVDAQRESRDADLFRRVVDALRRCLAAAAGVDLLPGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGAP-HWPLAHAACRAARAVGQTLQKAISFETM--------AARAXXXXXXXXXXXXXXXXXXXXXXSEAVFFGAG----SPSGR-LPVSPRSGGSPLSP--------LLDLPSTPHSVAAXXXXXXXXSTYNSPHITTADAAEASNMAAIRDLCRAISGHGFLDCPHRH-------AMFLLVPDPSHRDPELQEMWAEVQMKMEACPASLPEASL 931          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5341.12757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KD03_9PHAE0.000e+059.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJG9_ECTSI0.000e+061.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8W3_9STRA3.130e-4531.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 199..831

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5341contigH-paniculata_contig5341:4721..14017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5341.12757.1mRNA_H-paniculata_contig5341.12757.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5341 4721..14017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5341.12757.1 ID=prot_H-paniculata_contig5341.12757.1|Name=mRNA_H-paniculata_contig5341.12757.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=919bp
SYDSINKPRPYWDVAREVVSKGYSMPKKKVVPLLRELCIRIGDNNVCDGA
FFGALLAILRSAKDGDWDGKAVRLVHFFIRGMVTAEGDTDGRMLGSYWEG
RGITPGQILQAVECFRYESEHRSAVRRIPAFQTMATLCQLAAVAEIGGQP
SPVQVLREATVAPLQSFQAQERPERGGKGRSYRQRLEAFQESLQISSSIF
SAVRRCPGLARDRAILPTVLQGCCSENSLAARHSFAVLAEQAAESPAIVS
QALLNKAMLLPTTVGMLQAPEGLASSGKEPNLSDALACVYYLRSLKTLAF
SEMLDDTMRLDMYRTMVSSVSDARHRVALEAMQCLLDHPRAWELLVDAQR
ESRDADIFRRVVDRIKLCVEEATSPTTAAASSVPESSISVDRGNKKRGKV
TEAEASGVGAGGAAGAQCNWALAHAACRVCRVVGRTFQVAISYETIQSQN
REQGAAARVTGSPGIFGATAAPATRPSSFNAESNWEGYGGVTPSPSSSSA
AVVPTEGGGSLDASAGGSAFNLLGLPPSPPPRSGVVEEQNTAAIRDLCRA
LRQHKLLESPHLHVRSLALEAMFLLVPDPSPVDPQLRGLWDWLQQRVQQC
PSTLPDSVLSELVDTLLTRVHCSAASREQVIPIALALTESFMYQVPSEEM
GRCVLRAWCQCVGYGGRARESVLQSVYRLLDRCRENLILLYTDSNGTIGA
ADVGGAANVEGDGGGGKKRHVVGAPSEDWTRLMTQPHTSTASATSNSANL
SPGKNGSRVGGGSNAENTRGLMLEGNTSILGGEEASRWAPGTNNAGGAQR
FSLHFLKARGAATRLKRSAYWFLGEYCGQLSGSVPEPSAQSDIKSDTTLD
KNDNDLLGNWSSSSAGNKFDVGLEGGDAGAVAIPHPVVAAMNGATVSILL
RLKHAAMFEDLQVTTDWAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold