mRNA_H-paniculata_contig5338.12748.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: D7FR95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR95_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 6.530e-137 Identity = 191/265 (72.08%), Postives = 215/265 (81.13%), Query Frame = 1
Query: 1 MYSLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHETYTHVDSPINIGEL 795
MYSLEGDGV EHLY+FI CKDE+SFRP +NI DT+VYKFGQP+SWYFTG+DG+VKKK KTNIIN+KIEEAFVKA+VGSD++AYY+SW S+ SKY DE+ TTIEYLDRQ MVRAIWSPKMCLLERRVN RQLHD+R+G+YERAVTYDGPDI+STA PLRGSVLPSQVQ+CCES+V HVS V F+KTR+CRMSLNFKIDSRDRVWLLWSNSIRLASE PPG E++T V PINIGEL
Sbjct: 1 MYSLEGDGVCEHLYEFISCKDELSFRPTINIADTIVYKFGQPVSWYFTGVDGKVKKKFKTNIINTKIEEAFVKASVGSDIVAYYISWTSNGSKYQDENEDKTTIEYLDRQGL--------------------------PMVRAIWSPKMCLLERRVNCRQLHDRRYGIYERAVTYDGPDIFSTACPLRGSVLPSQVQRCCESVVAHVSEVLFRKTRVCRMSLNFKIDSRDRVWLLWSNSIRLASEMPPGRESFTCVGGPINIGEL 239
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A7S2CLG5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CLG5_9STRA) HSP 1 Score: 338 bits (866), Expect = 7.720e-113 Identity = 153/268 (57.09%), Postives = 213/268 (79.48%), Query Frame = 1
Query: 1 MYSLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHETY--THVDSPINIGELV 798
++S+ GDGVS+ + +W KDE++F P +NIPDTV++KFGQ ++WYFTG+DG++KKK K N++N +IEEAF + +GSD++AYY+S +D + D N T+IEY DR+ F +FLY RWKE +G+LQRF+EPKGT+N++VRAIWSPK+CLLERR N +QLHD R+GLYERAVTY+GP+ +S A+PLRGS+LPSQVQ+ CE++V+H++ VSF+K ICRM LNFK+D++DR+WLLWS+S+RL SE G + +P+NI +V
Sbjct: 4 LHSVHGDGVSDQFFHLLWSKDELNFGPTINIPDTVIFKFGQAVAWYFTGVDGKLKKKNKQNLVNVRIEEAFTRHVIGSDIVAYYISTETDDA--GDVSN--TSIEYFDRKAFHDFLYNRWKEHSGLLQRFIEPKGTQNSLVRAIWSPKVCLLERRQNNKQLHDTRYGLYERAVTYEGPEYFSAAAPLRGSILPSQVQRICENVVSHIAEVSFQKQCICRMVLNFKVDAKDRIWLLWSSSLRLTSEMTGGEDGLGGRRTAAPLNIDSIV 267
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: F0YMK7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMK7_AURAN) HSP 1 Score: 327 bits (837), Expect = 1.470e-104 Identity = 156/262 (59.54%), Postives = 199/262 (75.95%), Query Frame = 1
Query: 7 SLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGI-DGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHETYTHVDSPINIG 789
SLEGDG+S+ L ++ KDE+ + P L +PDTVVYKFGQP+ WYFT DG++KKK K N++N +IEE F K N+G D++AYY+S +D S T IEY DR+ +FLY RWKE NG+LQRFVEPKG RN ++RAIWSPK+CLLERRVN +QLHD R+GLYERAVTY+GP+ +S A+PLRGS LPSQ+Q+ CE++VTH++ VSF+K RI RM +NFK+DSRDR+WLLWS+SIRL SE H +PI+IG
Sbjct: 5 SLEGDGISDVLLHWLHAKDELGYGPSLWLPDTVVYKFGQPVHWYFTSAADGKIKKKNKQNLVNVRIEETFNKRNIGCDIVAYYISEVTDESG----GGATTNIEYFDRRGLHDFLYNRWKEHNGVLQRFVEPKGIRNVVIRAIWSPKVCLLERRVNAKQLHDHRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQIQRICENLVTHINEVSFQKHRIARMVINFKVDSRDRIWLLWSSSIRLTSE---------HKQAPISIG 253
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A7S1XZC3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZC3_9STRA) HSP 1 Score: 314 bits (805), Expect = 2.100e-98 Identity = 142/241 (58.92%), Postives = 193/241 (80.08%), Query Frame = 1
Query: 7 SLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWAS-DASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRL 726
+++ DGV+EH + ++WCKDE++F L +PDTVVYKFG P++WYFTG+DG +K+K K N++N++IEEA K +GSDV+AYY++ S D + + H + IEY D+ FLY R+K+ +GILQRFVEPKGT NA++RAIWSPK+CLLERR NVRQLHD R GLYER +TY+GPD +S A+PLRGSVLPSQ+Q+ CE++V+HV+ VS++ RI RM LNFK+D+RD++WLLWS+S+RL
Sbjct: 6 TIDRDGVNEHFFHYLWCKDELNFGVHLWLPDTVVYKFGHPVAWYFTGVDGSIKRKHKQNLVNARIEEAMTKRVIGSDVVAYYMTLPSPDEEEDAKTTGHESDIEYFDKDALHQFLYTRFKDSSGILQRFVEPKGTNNAVIRAIWSPKICLLERRQNVRQLHDGRFGLYERCITYEGPDHHSRAAPLRGSVLPSQIQRICENVVSHVAEVSYQTFRISRMVLNFKVDARDKIWLLWSSSMRL 246
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: F0YIR0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR0_AURAN) HSP 1 Score: 306 bits (785), Expect = 1.240e-95 Identity = 149/243 (61.32%), Postives = 189/243 (77.78%), Query Frame = 1
Query: 7 SLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTG-IDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSW-ASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLA 729
SLEGDG+S+ L ++ KDE+ + P L +PDTVVYKFGQP+ WYFT +D ++KKK K N++N +IEEAF K + G D++AYY+S A + S SD TTIEY DR+ FLY RWKE NGILQRFVEPKG NA++RAIWSPK+CLLERRVN +QLHD+R+GLYERAVTY+GP+ +S A+PLRGS LPSQVQ+ CE++V H++ VSF+K I RM NFK+DS+ R+W LWS+SIRLA
Sbjct: 5 SLEGDGISDTLLHWLHAKDELGYGPSLWLPDTVVYKFGQPVHWYFTSTVDSKLKKKNKQNLVNVRIEEAFNKRSAGCDLVAYYISEVALEGSAESD-----TTIEYFDRRGLHEFLYNRWKENNGILQRFVEPKGMHNAIIRAIWSPKVCLLERRVNSKQLHDQRYGLYERAVTYEGPEHFSAAAPLRGSTLPSQVQRICENLVAHITEVSFQKHCIMRMVANFKVDSKGRIWFLWSSSIRLA 242
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A836CLN6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLN6_9STRA) HSP 1 Score: 296 bits (758), Expect = 4.940e-95 Identity = 140/262 (53.44%), Postives = 187/262 (71.37%), Query Frame = 1
Query: 10 LEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKAN-------------------VGSDVIAYYVSWASDASKYSDEDNHATT-IEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASE 735
+ GDGV LY+++WCKDE+SF P +N+PDTVVYK+GQP+ WYFT +DG +KKKL++N+ N+KIEE+F+K GSDV+AYY+SW ++ + ++ A IEY D + FL+ R K+ NGILQ FVEP G+ NA+VRAIW+PK+CL ERRVN R+L DKR+GL+ERAVTYDGPDIYS A PLRG+VLP+ V+ C++I HV+ ++ + RI MSLN KID +DR+WLLWS+SIRL +
Sbjct: 1 IAGDGVCISLYEYLWCKDEISFSPQINVPDTVVYKYGQPVHWYFTAMDGTIKKKLRSNMTNAKIEESFLKKAHAQAPKTSKSKHHPQDALLEGSDVVAYYISWETNGADAGNKSEQAAAEIEYFDAAGLKEFLFHRSKQHNGILQAFVEPSGSSNAVVRAIWTPKLCLTERRVNCRKLRDKRYGLFERAVTYDGPDIYSVARPLRGTVLPTAVRHLCDAIAAHVAEITIHQQRISCMSLNLKIDHKDRLWLLWSSSIRLVRD 262
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A6S8UJB5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8UJB5_9STRA) HSP 1 Score: 298 bits (762), Expect = 8.100e-94 Identity = 143/263 (54.37%), Postives = 189/263 (71.86%), Query Frame = 1
Query: 10 LEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHETYTHVDSPINIGELV 798
LEGDG+S+ L ++ KDE+ + P L +PDT+VYKFGQP+ WYFT + G++KKK K N+ N +IEE F K N S+V+AYY+S + + T IEY DR+ FLY RWKE NGILQ FVEPKG NA++RAIWSPK+CLLERRVN +QL+D+R+GLYERAVTY+GP+ +S ASPLRG+ LPSQ+Q+ CE++V HV+ VSF+K R+ RM NFK+DSR R+W LWS+SIRL + + +PI+I +
Sbjct: 6 LEGDGISDVLLSWLHTKDELGYGPSLRMPDTIVYKFGQPVHWYFTSVSGKLKKKNKQNLANVRIEEVFNKRN--SEVVAYYMSEMAVQGRRE----KVTAIEYFDRRGLHEFLYNRWKENNGILQHFVEPKGVHNAIIRAIWSPKVCLLERRVNSKQLYDQRYGLYERAVTYEGPEHFSIASPLRGTALPSQIQRLCENLVAHVTEVSFQKCRVARMVANFKVDSRGRIWFLWSDSIRLERSCGKSQDL-PRICTPIDINRTI 261
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A482RV48_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV48_9ARCH) HSP 1 Score: 294 bits (752), Expect = 2.490e-93 Identity = 137/268 (51.12%), Postives = 193/268 (72.01%), Query Frame = 1
Query: 7 SLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHET----YTHVDSPINIGELV 798
SL DG+S+ LY +W +DE+++ P +NIPDT++YK+GQP++WYFT ++GR+K+K K N++++KIEEAF K +G DV+AY+++ AS+ + ++ + T IEY DR NFLY K NGILQRF+EPK T N ++RAIWSPK+CLLER N+ QLHD+R+GLYER V Y+GPD Y T++PLRG VL Q+QK CESIV H+S V++ + I RM L+FK+DSRD++WLL+S SIR H T ++DS +++ V
Sbjct: 13 SLIKDGISDDLYKLLWARDELNYGPHINIPDTIIYKYGQPVTWYFTSVNGRIKRKNKQNLLSAKIEEAFNKHILGYDVVAYFITMASEHERSVNDSSTPTIIEYFDRVGLNNFLYNHKKGVNGILQRFIEPKSTHNELIRAIWSPKLCLLERAENIHQLHDQRYGLYERCVVYEGPDYYFTSAPLRGPVLSGQLQKLCESIVHHISEVTYGQKLITRMVLSFKVDSRDKIWLLYSTSIRSDDMLEHKHSTTERHLLNIDSVVSLPNTV 280
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A7S3H9W1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H9W1_9STRA) HSP 1 Score: 292 bits (747), Expect = 2.600e-91 Identity = 140/269 (52.04%), Postives = 191/269 (71.00%), Query Frame = 1
Query: 1 MYSLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIR---LASETPPGHETYTHVDSPINIGELV 798
++SL DG+SE L+ +W KDE++ P +NIPDT+VYK+G P+SWYFT +G++KKKLK N++++KIEE F K +G DV+A ++S ++A A IEYLDR+ NFLY R KE NGILQRF+EPK TRN +VRAIWSPK+CLLER N+ QLHD R+GLYER V Y+GP+ Y+T++PLRG VL Q+QK CE +V H+S V+F + ++ R+ LNFK+DSRD++WL++S SIR + T P T +NI +V
Sbjct: 11 LHSLSKDGISEDLFKLLWAKDELNSGPSINIPDTIVYKYGTPVSWYFTSTNGKIKKKLKQNLVSAKIEETFNKHVLGYDVLAVFISMPAEAEVAP---GGANVIEYLDREALNNFLYNRKKEVNGILQRFIEPKSTRNELVRAIWSPKVCLLERSENIHQLHDHRYGLYERCVIYEGPEYYTTSAPLRGPVLSGQLQKLCEEVVAHISEVTFGQKQVSRIVLNFKVDSRDKIWLMYSTSIRCLDMLDYTNPTDAAATLQRQLLNIDSVV 276
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Match: A0A6G0WWE7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWE7_9STRA) HSP 1 Score: 277 bits (708), Expect = 5.580e-87 Identity = 138/262 (52.67%), Postives = 175/262 (66.79%), Query Frame = 1
Query: 10 LEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIDGRVKKKLKTNIINSKIEEAFVKANVGSDVIAYYVSWASDASKYSDEDNHATTIEYLDRQDFRNFLYKRWKERNGILQRFVEPKGTRNAMVRAIWSPKMCLLERRVNVRQLHDKRHGLYERAVTYDGPDIYSTASPLRGSVLPSQVQKCCESIVTHVSAVSFKKTRICRMSLNFKIDSRDRVWLLWSNSIRLASETPPGHETYTHVDSPINIGEL 795
LEGDG+ E+L+ ++WCKDE P L IPDTVVYKF QP WYFT G+VKKK KT++ N IE+ F + G D++AYY+ +D TIEY ++FLY R K NGILQRF+ PKG+ N+M+RAIW+PKMCLLER+ N+R+LHD R+GLYERAVT+DG D YS P+RGSVLP +Q CE +V HV VSF K RI RM L+ K D+ D+VWLLWS+SIRLA H + +H + +N L
Sbjct: 9 LEGDGLVENLFYYLWCKDEFGGGPSLLIPDTVVYKFTQPAYWYFTSKSGKVKKKSKTSLTNVMIEKEFCRKACGVDIVAYYIYMLNDVP----------TIEYFTVDGLKDFLYSRQKIHNGILQRFIVPKGSANSMIRAIWTPKMCLLERKTNIRRLHDLRYGLYERAVTFDGADAYSNPDPVRGSVLPGDIQYLCEQVVDHVMEVSFHKYRISRMVLHIKTDAEDKVWLLWSSSIRLA------HPSRSHNSNAMNSASL 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5338.12748.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5338.12748.1 >prot_H-paniculata_contig5338.12748.1 ID=prot_H-paniculata_contig5338.12748.1|Name=mRNA_H-paniculata_contig5338.12748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=266bp MYSLEGDGVSEHLYDFIWCKDEVSFRPILNIPDTVVYKFGQPISWYFTGIback to top mRNA from alignment at H-paniculata_contig5338:431..2920- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5338.12748.1 ID=mRNA_H-paniculata_contig5338.12748.1|Name=mRNA_H-paniculata_contig5338.12748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2490bp|location=Sequence derived from alignment at H-paniculata_contig5338:431..2920- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5338:431..2920- >mRNA_H-paniculata_contig5338.12748.1 ID=mRNA_H-paniculata_contig5338.12748.1|Name=mRNA_H-paniculata_contig5338.12748.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1596bp|location=Sequence derived from alignment at H-paniculata_contig5338:431..2920- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |