mRNA_H-paniculata_contig53012.12701.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A6G0W7J2_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7J2_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.810e-18 Identity = 46/121 (38.02%), Postives = 73/121 (60.33%), Query Frame = 1
Query: 130 EPKNHQKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQA 492
EP+N ++A + P+ +HW + + E+ GL+ NG W VERP + VVS YK K +G+++K+K+RLVA G Q + + +P + R++ +LAA +RH+DF QAYL+A
Sbjct: 1081 EPRNAKEALSGPQAKHWQESMQAELDGLVANGTWEVVERPPSGNVVSHKWVYKIKYDREGQIDKFKARLVARGFTQRYGVEFSKTFAPVIKQASVRVIFALAATLKRTVRHLDFPQAYLKA 1201
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A4S4LPF2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4LPF2_9AGAM) HSP 1 Score: 87.4 bits (215), Expect = 5.760e-17 Identity = 54/156 (34.62%), Postives = 84/156 (53.85%), Query Frame = 1
Query: 34 DDEEFMAYDEVDIMAMQVALAILEELRGDLPMEPKNHQKAQASPEWEHWPRAEEVEVQGLIDN-GVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
+DE +D+V ++ ALA R EP+N +A+ +W HW A + E+ G+I+ G W V+RP + VV + +K K G DGE+ KYK+RLVA G Q+ I + +P + R +L++AA DWE+ +D + AYL +
Sbjct: 319 EDEGTTFWDDVRAQDVEHALAT----RVTDSHEPRNVTEARRGSDWSHWEAAMKTEL-GMIEKLGTWELVDRPSDANVVGSKWVFKIKRGADGEIIKYKARLVAQGFTQVPGIDYSDTFAPVAKLESIRALLAIAARNDWEIHQMDVKNAYLNGDL 469
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA) HSP 1 Score: 81.3 bits (199), Expect = 2.980e-16 Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 1
Query: 175 HWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
HW A + E + L G W V P+N+ V+ + YK K +DG+V +YK+RLVA G Q + E SP T R+VLSLAA+ W+LR +D + A+L +
Sbjct: 64 HWRNAMQEEFEALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDLRQLDVKNAFLHGEL 171
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 84.7 bits (208), Expect = 5.270e-16 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 130 EPKNHQKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
EP++ +AQASPEW W +A + E L G W + PK++ V ++RK ++G+V KYK+RLVA G QI + E +P + R +L+LA + +WE+ +D + AYL +
Sbjct: 906 EPRSLAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDL 1028
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL) HSP 1 Score: 84.7 bits (208), Expect = 5.310e-16 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 1
Query: 145 QKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
++A+ P+W HW A E+ L G WT V RP + VV + K GE+EKYK+RLVA G Q++ + E +P + R+VL++AA DW++ DF AYL +
Sbjct: 1066 EEARRRPDWPHWQAAINTELDSLKSAGTWTVVPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDFNSAYLNGEL 1183
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A) HSP 1 Score: 79.7 bits (195), Expect = 7.190e-16 Identity = 41/114 (35.96%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 130 EPKNHQKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDF 471
+P+ ++A SP+ E W A E E++ L N W V RP+ + VV +KRK+ +DG+VE+YK+RLVA G Q++ I +E SP + R +L+ + QDW++ + +
Sbjct: 30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLLAFSVEQDWQVHQLGY 143
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A8I6XHP4_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XHP4_HORVV) HSP 1 Score: 84.0 bits (206), Expect = 9.330e-16 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 1
Query: 130 EPKNHQKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
EP N +A SP W H A + E++ + NG WT V RP N+ V YK K G + KYK+RLVA G Q + + E +P T R++L+LAA +DW++ H+D + A+L +
Sbjct: 669 EPANFVEASKSPSWTH---AMDEEMKAIESNGTWTLVTRPPNQKTVGLKWVYKLKKDTKGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQEDWKVHHMDVKSAFLNGDL 788
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: A0A151S309_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S309_CAJCA) HSP 1 Score: 83.6 bits (205), Expect = 1.250e-15 Identity = 42/109 (38.53%), Postives = 60/109 (55.05%), Query Frame = 1
Query: 172 EHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
E W RA E E+ L +NG WT V P + + YK K DG +E+YK+RLVA G QI+ + + SP T R+VL+LAA+Q+W + +D A+L +
Sbjct: 273 ECWKRAMEAEISALENNGTWTLVHLPPGIISIGNKWVYKIKTRSDGTIERYKARLVAKGYTQIEGLDYLDTFSPVAKLTTIRVVLALAAMQNWHIHQLDVNNAFLHGDL 381
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: UPI000CED7874 (uncharacterized protein LOC112098012 n=1 Tax=Citrus clementina TaxID=85681 RepID=UPI000CED7874) HSP 1 Score: 79.0 bits (193), Expect = 1.330e-15 Identity = 42/107 (39.25%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 178 WPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
W + E LI NG W+ V R +K VV Y+ K DG V KYK+RLVA G +QI ++ E SP T R++LSLA + W++R VD A+L +
Sbjct: 36 WFTTMKKEYAALIQNGTWSLVPRIADKRVVGNKWVYRAKYNTDGSVAKYKARLVAKGFQQIMGVNCFETFSPVIKPATVRVILSLAVMNQWKIRQVDVNNAFLNGEL 142
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Match: J6ERE3_TRIAS (Gag-Pol n=1 Tax=Trichosporon asahii var. asahii (strain ATCC 90039 / CBS 2479 / JCM 2466 / KCTC 7840 / NBRC 103889/ NCYC 2677 / UAMH 7654) TaxID=1186058 RepID=J6ERE3_TRIAS) HSP 1 Score: 83.6 bits (205), Expect = 1.330e-15 Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 1
Query: 130 EPKNHQKAQASPEWEHWPRAEEVEVQGLIDNGVWTQVERPKNKLVVSTIMTYKRKIGEDGEVEKYKSRLVAHGNRQIKTIH*QEASSPAPAAVTTRIVLSLAAIQDWELRHVDFEQAYLQAPI 498
+PK +A A P+ E W A + E+ L+ G W++ + PK+K V+ +KRK DG V KYK+RLV G QI + +E +P + + ++LS+AA + ELR D E AYL I
Sbjct: 890 DPKTVAEALALPDAEQWIEAMKKEIDNLVGKGTWSEAKLPKHKKAVTAKWVFKRKRDADGNVVKYKARLVGRGFSQIPGVDFEETYAPVGRSTSLLLILSIAARYNLELRQADVEGAYLNGTI 1012 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig53012.12701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig53012.12701.1 >prot_H-paniculata_contig53012.12701.1 ID=prot_H-paniculata_contig53012.12701.1|Name=mRNA_H-paniculata_contig53012.12701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp MAYDEVDIMAMQVALAILEELRGDLPMEPKNHQKAQASPEWEHWPRAEEVback to top mRNA from alignment at H-paniculata_contig53012:22..519- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig53012.12701.1 ID=mRNA_H-paniculata_contig53012.12701.1|Name=mRNA_H-paniculata_contig53012.12701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=498bp|location=Sequence derived from alignment at H-paniculata_contig53012:22..519- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig53012:22..519- >mRNA_H-paniculata_contig53012.12701.1 ID=mRNA_H-paniculata_contig53012.12701.1|Name=mRNA_H-paniculata_contig53012.12701.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=654bp|location=Sequence derived from alignment at H-paniculata_contig53012:22..519- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |