prot_H-paniculata_contig5260.12637.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: D7G5I6_ECTSI (RRP7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5I6_ECTSI) HSP 1 Score: 230 bits (587), Expect = 1.180e-70 Identity = 147/309 (47.57%), Postives = 173/309 (55.99%), Query Frame = 0
Query: 8 VAKGYRVVPQRLWPAPVESPSSVPGVRPGAGYRYLHIKEHRGIFR--VTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGHVSHVQISPPEGTDNHKTI-NGRGQAQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDE---------NGDETLGYAGLIQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYKKKRGRSV-------PLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQV 297
VAKGYRVVPQ L A G G+R+LH+KEH+G+F+ V++ G A+GTTLFVGNVDDQGGRLCRK I RLRRA S CG + HVQ+S + + RG G+K +RFAHV FS+ GVQ ALAL+ + SG NGDET GYA LIQRHRR F PR LQ EVD M RFE+EE+ E A+RKA+LENP DDGF+TVTYK+KRGR+ P V A G KKKRKGAG L DFYRFQ+
Sbjct: 4 VAKGYRVVPQALADA---------GAGTSRGFRHLHLKEHKGLFKAAVSAAGGEGGRETTAASARGTTLFVGNVDDQGGRLCRKTIEARLRRALSPCGKILHVQVSAAASAATGGGVGDARGTTVTGRKHTGAARFAHVCFSSTKGVQRALALEQLPSGASTASATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDETCGYAALIQRHRRKFPPRKALQEEVDATMLRFEEEESAEIAQRKAMLENPEGDDGFVTVTYKRKRGRNSGGGTGNPPDGVVAG--------GAKKKRKGAGELSDFYRFQM 295
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: A0A835Z5W2_9STRA (Ribosomal RNA-processing protein 7-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5W2_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.400e-8 Identity = 60/226 (26.55%), Postives = 91/226 (40.27%), Query Frame = 0
Query: 41 YLHIKEHRGIFRVTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGHVSHVQI--------SPPEGTDNHKT--INGRGQAQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGLIQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYKK 256
Y+ +KEHR G G G TLF NVDD GG L + RL + G + V++ +G D+ + + G G +G +A R A + FS A ++ ALA + + D + G A ++Q++R EL+ VD ++ F+ +EAE+ +R D DGF+TVTYKK
Sbjct: 23 YVFVKEHR------EGPGSGA---------GRTLFAVNVDDDGGTLTDAALKARLTAQWEGFGPIDAVELVERDSSGKGAGKGVDSSSSGHLAGVGAEPLGTRA----RCARIRFSDAAALKRALAAKQLPRPPD------------------------DAGRLTGLAAVVQQYRDARPDHEELRQRVDAYIQHFDAKEAEDEQERLDAKNQQPDADGFVTVTYKK 205
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: L8HHU1_ACACA (RRP7 domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHU1_ACACA) HSP 1 Score: 61.6 bits (148), Expect = 4.160e-7 Identity = 81/277 (29.24%), Postives = 116/277 (41.88%), Query Frame = 0
Query: 41 YLHIKEHRGIFRVTSGKNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGH-VSHVQIS-----PPEGTDNHKTI----------NGRGQ----AQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGLIQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYK-KKRGRSVPLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQ 296
YL+I++HR +V + E +TLFV NV D + D+LRR F CGH V V + PP D+H+ GRG AQ FAHV+FS+ DG++AAL S+ AE + + + G L++ P+ L AEVD M F+ + + +A L P D DGF+TV K +K+ +P+A+ AA AA +++ L DFYRFQ
Sbjct: 98 YLYIRQHRAGSQVDDDPRGHHPTE--EAGATSTLFVANVGDDADAGA---VEDQLRRLFERCGHPVESVTLKSMRRVPP--ADSHRQXXXXXXRPAHQGGRGPWLEVAQADDAEARPLVFAHVTFSSPDGLRAALRYDWNSAAA----------------AESDAAGEAAGSGRGVNKWLLEYEEARPDPQRVL-AEVDAFMADFDRRQRLAEKEEEAALGKP-DADGFVTVRRKGRKKVADGGIPIASAKAAPALAAKAQRQESDK-VLLDFYRFQ 348
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Match: A0A067QKC0_ZOONE (Ribosomal RNA-processing protein 7-like protein A n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QKC0_ZOONE) HSP 1 Score: 55.8 bits (133), Expect = 2.100e-5 Identity = 74/246 (30.08%), Postives = 98/246 (39.84%), Query Frame = 0
Query: 57 KNHGEAVKAREFAKGTTLFVGNVDDQGGRLCRKEIADRLRRAFSNCGHVSHVQI--SPPEGTDNHKTINGRGQAQVGKKAMLGSRFAHVSFSTADGVQAALALQGISSGTDLQKKCKKSRKRTREGAEDEESRDENGDETLGYAGL---IQRHRRNFLPRSELQAEVDTIMERFEDEEAEEAAKRKALLENPTDDDGFITVTYKKKRGRSVPLPVAADLAAANAAAGVKKKRKGAGSLPDFYRFQV 297
K H K TLF+ NV C K D +R FS CG V+ V P GT T Q + G + A+V F G+Q AL L L C K ET GL Q + S LQ E+DT ME+F+DE +A K K +++ D++G+ITVT KRGR A + G +K+R+ L +FYRFQ+
Sbjct: 30 KEHSVREKNSSKPTNRTLFIINVPP----YCNK---DCFKRIFSVCGSVTSVFFHQKPSAGT----TPPEESQFFTKCPRIKGFKVAYVVFEDNRGLQRALKLGENMKPVIL---CTK--------------------ETPILCGLQKWCQEYNNRIPDISLLQKEIDTFMEKFDDEAHRKALKEKEMMQE--DEEGWITVT---KRGRKPGF--ARKESVEKKIMGKEKQRRSKKELRNFYRFQI 234 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5260.12637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5260.12637.1 ID=prot_H-paniculata_contig5260.12637.1|Name=mRNA_H-paniculata_contig5260.12637.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bpback to top |