prot_H-paniculata_contig526.12636.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig526.12636.1
Unique Nameprot_H-paniculata_contig526.12636.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length712
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig526.12636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 70..211
e-value: 4.6E-28
score: 99.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 212..370
e-value: 5.6E-43
score: 149.4
coord: 622..710
e-value: 2.3E-23
score: 85.0
coord: 453..621
e-value: 3.8E-52
score: 179.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 371..441
e-value: 1.6E-18
score: 68.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 644..701
e-value: 2.8E-9
score: 36.9
coord: 155..214
e-value: 3.3E-12
score: 46.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 591..615
e-value: 0.14
score: 12.5
coord: 239..268
e-value: 0.0027
score: 17.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 553..586
e-value: 0.0024
score: 15.9
coord: 204..236
e-value: 1.4E-5
score: 23.0
coord: 168..202
e-value: 1.4E-8
score: 32.4
coord: 483..517
e-value: 4.8E-6
score: 24.4
coord: 346..377
e-value: 3.1E-5
score: 21.8
coord: 658..691
e-value: 2.2E-4
score: 19.2
coord: 310..342
e-value: 1.1E-7
score: 29.5
coord: 449..482
e-value: 2.6E-4
score: 18.9
coord: 379..412
e-value: 4.3E-10
score: 37.1
coord: 518..552
e-value: 4.9E-9
score: 33.8
coord: 239..272
e-value: 9.1E-5
score: 20.4
coord: 414..447
e-value: 1.6E-8
score: 32.2
coord: 624..656
e-value: 2.7E-8
score: 31.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 445..492
e-value: 9.3E-11
score: 41.8
coord: 515..563
e-value: 9.4E-13
score: 48.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 376..410
score: 13.154
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 691..711
score: 5.24
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 621..655
score: 12.54
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 516..550
score: 13.143
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 166..200
score: 12.858
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 446..480
score: 11.027
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 10.545
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 481..515
score: 11.104
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 656..690
score: 10.139
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 551..585
score: 9.942
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 411..445
score: 12.606
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 201..235
score: 10.567
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 586..616
score: 7.794
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 12.101
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 131..165
score: 10.019
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 8.429
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 10.808
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 278..439
e-value: 1.6E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 356..543
coord: 129..389
NoneNo IPR availablePANTHERPTHR46128:SF10coord: 129..389
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 392..631
coord: 491..703
NoneNo IPR availablePANTHERPTHR46128:SF10coord: 392..631
coord: 356..543
coord: 491..703

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig526contigH-paniculata_contig526:28991..31126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig526.12636.1mRNA_H-paniculata_contig526.12636.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig526 27550..31870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig526.12636.1 ID=prot_H-paniculata_contig526.12636.1|Name=mRNA_H-paniculata_contig526.12636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=712bp
MALRCGGSSSVGYIRTVTRRSLRTLHATIAPDTSQEEVPPASKFTEGDAS
SSRHQQFGGTADVVGGWRGRREEQQRRSDMEKRRHNSPAVLATQKPYIAR
LRAAGTQQNWEQVTRVLDEALALDNARAVVSVHVYSAAVTAAIRCGKWNG
ALELLAFMKQEGVQPNEYTYGPIIKAYSRAGLWEMAETLLQEMREDGLQP
DIATYNLIILACGKAGRWEQVLALLRQMSTDKLTADIRMYGRIISLCESS
GEWKQAMALLNEMQRCGIRPDECLYNSVIATCAKVGQWEQTVALLRQKHT
VGLPVDLLNYHSVISACGKSGKWKQAVDILSEMRTEGIAPDAVAFTVTIG
ACAKAGNWKVAVDLLKEMQAKRLLPDAKTYSSLISACGKLGELEQAVSLL
DDMQRCGISPDEYHYTAVMSAFVKAGQWEQAVALLRQMQAHGVTPDVAVF
NSSITACGTARQWEQAMDLFEELQTSGLTPNVVTFNSAITACGNSGQWER
GLNLLAQMQSQDVNPDVVTYNSAITACADSGQWEKALSVLEQMELNGVVP
DAVSYSSAISGCGKAGQLAHAMVLFTKATAVGLAPNAFIHSAAITACGHV
GEWEKAMSLLRQLQKEVGTLEASAYNATIKACGKSGKWEHALALLREMRA
EGVSPDNISYRSAIIACGRSGQREQALAIFRQMHADGGAPNLITYNATIH
ALASVKRRWTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
IPR033443PPR_long