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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 2968 |
| Cds size | 2136 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig526.12636.1 >prot_H-paniculata_contig526.12636.1 ID=prot_H-paniculata_contig526.12636.1|Name=mRNA_H-paniculata_contig526.12636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=712bp
MALRCGGSSSVGYIRTVTRRSLRTLHATIAPDTSQEEVPPASKFTEGDAS
SSRHQQFGGTADVVGGWRGRREEQQRRSDMEKRRHNSPAVLATQKPYIAR
LRAAGTQQNWEQVTRVLDEALALDNARAVVSVHVYSAAVTAAIRCGKWNG
ALELLAFMKQEGVQPNEYTYGPIIKAYSRAGLWEMAETLLQEMREDGLQP
DIATYNLIILACGKAGRWEQVLALLRQMSTDKLTADIRMYGRIISLCESS
GEWKQAMALLNEMQRCGIRPDECLYNSVIATCAKVGQWEQTVALLRQKHT
VGLPVDLLNYHSVISACGKSGKWKQAVDILSEMRTEGIAPDAVAFTVTIG
ACAKAGNWKVAVDLLKEMQAKRLLPDAKTYSSLISACGKLGELEQAVSLL
DDMQRCGISPDEYHYTAVMSAFVKAGQWEQAVALLRQMQAHGVTPDVAVF
NSSITACGTARQWEQAMDLFEELQTSGLTPNVVTFNSAITACGNSGQWER
GLNLLAQMQSQDVNPDVVTYNSAITACADSGQWEKALSVLEQMELNGVVP
DAVSYSSAISGCGKAGQLAHAMVLFTKATAVGLAPNAFIHSAAITACGHV
GEWEKAMSLLRQLQKEVGTLEASAYNATIKACGKSGKWEHALALLREMRA
EGVSPDNISYRSAIIACGRSGQREQALAIFRQMHADGGAPNLITYNATIH
ALASVKRRWTS* back to topmRNA from alignment at H-paniculata_contig526:27550..31870+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig526.12636.1 ID=mRNA_H-paniculata_contig526.12636.1|Name=mRNA_H-paniculata_contig526.12636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4321bp|location=Sequence derived from alignment at H-paniculata_contig526:27550..31870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AACTACCTGCTCCTTGCGACGGCCTTCTTCCATTGCAGGTGGGATCATTC
TAGTGTTACCTACTCCACTCTATTTATCTGTATATAAGGTCTAGGAACTT
GTGTAAAGCTTCATCAAGCGTTGAATGCACCCAGTTACAAGAGGAATTTA
CCCTCAGGACCCAGTCCTTGCAGAGGGCAGCGTAGTGCTATATGTGACAC
GATCATTGAGCTCACACTGTTGTACCTGGCAAGTGCATACTATCAATCCG
AGAGGATGGATCCAAATTTCGGTGCAAATGCTGCACGCCGCAGGGCTTGC
GCTAACACTTGGACCCGTCCTCTCCAGTCGATAGAATCGACCTGTCGAAG
CGTTACACTTCCCGTCTGGTTTCATCCGTTACAGACTCCGGTACCGTGTT
CTTACCCGTAAAGAACGGCACAGACCCGGTGGCATGTGTCGCTTGGTTGG
ACAAATGCTACCAAAGAGATGACAGGGCTTCCCCAAAGTTTCTGGTATTG
TAATTCATGCCCTACTAAAGGACATCTTGGTGCTTGCGAAATGAAGCTGT
TGTGCACACGCTGCTGTAAGCTTTGCTGTAAGACAAAAGACCTGACGGGC
AACATGTGACCCTTGTATCTACATAACACTCGTCGAAACAGCCTCTTTTC
CGTAACCACTGATATCTGTCAATAGCGGACAGAGTACTCTTGTGGACTCC
GTTGAACCATGGCGCCAGTGTTATTATCCGTGCAGTCTTGTGCTGTGAGT
TGACCGAAATTAAATCCTAAGGGAGAAAAACTGTGGTCGTTGTATATTTA
ATGGCGGTTTGTAACCGTTTAGAGGGGGGGGCGATGAATGCTGTCTCTTT
TGCTTCAGATTACTTGACTCAGTGTTGGATCCTGTCAGATACCAAGCCCG
ATTGCTCAAAACAATCAACGGAAAGGACCAATACCCGACCCCTGTAGTTT
TTTCTAGATTATTGGCATCATTGCATCCGGATTTCCATACTTTTATGCGA
CGTTGTGTCCTTAATGACAGCAGACAAGGGCTGATGAGGTTCGAGGCCCA
ACGTACACTCGTAATCTTCGACGCCGGTCCAAACCGCGTTGGGATGAGCT
AAAGCCACCAAGGCTCCTCAGCAAGAACACCTATAAAAAGATCAACGCAC
GAAAATGATAGATGCAAGTCGGTGAAGATGGTTACGGGTATCGACGTGTG
TCGTGCACATGATAGAATTTGGCGGTCTTGATGGCGCAGACTGGGAGACA
ACACGAGAGACCGACTCAACTTCATGCCATCATTGCTGCTCGAGAAAGGT
GACCTGAATCTGGCATTGTACCTACTGCATACGGCTGCCCTGTACTGAAC
TATTCCCGTTCCCCACGTCTCACACTCCGTGTTTTCTTCAGGTTCCCTAT
ATTCGCAGACGACACTACAGTCTTCGTTTTTACATGGTGTCATGGCCCTC
CGCTGTGGTGGTAGCTCCTCCGTAGGCTACATCCGGACGGTTACGAGACG
ATCGTTGCGTACGTTGCATGCAACGATTGCTCCTGACACATCACAAGAAG
AAGTGCCACCAGCTTCGAAGTTCACAGAGGGGGATGCATCGAGCAGTAGA
CATCAACAGTTCGGAGGAACGGCTGATGTTGTGGGGGGTTGGCGTGGTCG
TCGAGAAGAACAGCAGCGAAGAAGCGACATGGAAAAGAGACGCCACAACA
GTCCTGCCGTCCTTGCGACACAGAAGCCCTATATTGCTCGATTGAGGGCG
GCAGGCACACAACAGAACTGGGAACAGGTTACGCGAGTTCTAGACGAAGC
CCTTGCTCTCGACAACGCACGAGCTGTCGTCTCTGTACATGTGTACTCCG
CCGCCGTGACGGCTGCTATACGGTGTGGAAAATGGAATGGGGCGCTTGAA
TTGCTGGCTTTCATGAAGCAGGAGGGTGTTCAACCTAACGAGTACACATA
CGGCCCCATCATCAAAGCTTATTCACGAGCGGGTCTGTGGGAAATGGCGG
AGACTCTGTTGCAAGAAATGCGCGAAGATGGATTACAGCCCGATATTGCG
ACTTATAACCTCATCATCTTAGCATGCGGGAAGGCTGGCCGGTGGGAGCA
GGTGTTGGCTCTCTTGCGACAAATGTCGACGGATAAGCTCACAGCAGATA
TCAGGATGTATGGCCGTATAATCTCACTTTGCGAGAGTTCTGGAGAATGG
AAGCAGGCAATGGCACTTCTGAACGAAATGCAAAGGTGTGGTATTAGGCC
CGATGAATGCCTGTACAACTCCGTCATCGCCACTTGTGCGAAGGTTGGGC
AATGGGAGCAGACTGTGGCTCTTCTGAGACAGAAGCATACGGTGGGTCTC
CCGGTGGATTTATTGAACTACCACTCAGTAATCTCTGCTTGCGGGAAGTC
TGGGAAATGGAAACAGGCAGTGGATATTTTGAGCGAGATGCGCACGGAAG
GAATCGCCCCCGATGCTGTGGCTTTTACGGTGACGATCGGCGCTTGTGCA
AAGGCTGGCAATTGGAAGGTTGCCGTTGATCTCTTGAAGGAGATGCAGGC
TAAGCGTCTTTTACCAGATGCTAAGACCTACAGCTCGCTCATCTCTGCTT
GTGGGAAGTTGGGAGAGTTGGAGCAGGCTGTTTCTCTGCTGGACGATATG
CAAAGATGCGGCATCAGCCCTGATGAATACCACTACACAGCGGTTATGAG
TGCTTTTGTGAAGGCCGGCCAATGGGAGCAGGCTGTGGCTCTTTTGAGAC
AAATGCAGGCGCACGGAGTAACTCCCGACGTTGCGGTTTTCAACTCTAGC
ATCACTGCTTGCGGGACAGCTCGCCAATGGGAGCAGGCTATGGATTTGTT
CGAGGAGTTGCAAACATCGGGTCTCACCCCTAATGTCGTCACCTTCAACT
CGGCCATCACAGCTTGTGGAAACAGTGGCCAGTGGGAGCGGGGGTTAAAT
CTATTGGCACAAATGCAGAGCCAGGATGTTAATCCCGACGTGGTGACCTA
CAATTCAGCCATCACGGCGTGTGCAGACAGCGGTCAGTGGGAAAAGGCGT
TGTCTGTTTTGGAGCAGATGGAACTTAACGGTGTTGTCCCCGATGCCGTC
TCCTACAGTTCGGCTATCTCAGGCTGCGGAAAGGCCGGCCAGTTGGCGCA
CGCGATGGTGCTCTTCACGAAGGCAACAGCTGTTGGTCTTGCACCTAACG
CCTTCATACACAGTGCGGCCATCACAGCGTGCGGACACGTCGGCGAATGG
GAGAAGGCGATGTCTCTTTTGAGGCAGTTGCAGAAAGAGGTAGGTACCCT
TGAAGCGTCTGCTTACAACGCGACCATCAAGGCTTGTGGGAAGAGTGGCA
AGTGGGAGCACGCGTTGGCACTTTTGAGGGAAATGCGGGCGGAGGGAGTG
TCCCCTGACAATATTTCCTACAGATCGGCCATCATAGCTTGTGGAAGAAG
TGGTCAGCGGGAGCAAGCGTTGGCGATTTTCAGGCAAATGCACGCGGATG
GTGGCGCCCCGAATCTCATTACCTACAACGCAACCATTCACGCTCTGGCG
AGTGTGAAACGGCGGTGGACCTCGTAAGACAGATACACGCGGGAGGTACT
AAACAGCGTACCGTACTGTCATTAGCTCTCTCGCCGTGTTTCTCGTGTAC
GATTGTCGGAACCCGAAGGTGTAATAGTGCAGAGTGATTTTGATTTGATA
TATCAAGAGACAGACGTGTCTGGACACATACAAGATGAGAGCTGGGGACA
TAATTCATGATGATTGGATATTTCTCTCTTGGTGTGTTAGCATAATCAGG
TCGTGGACATGCCGAAAGTGAGTGCCCGTGTCAAAGTAGAGGAGTGTGTA
AGAACCGAGGGAGGGAATTTATGCCCACGATCTCGAATTTGGGAGACTTG
GGTTTGATCACTGCAGTTTTCAATATGTGTTGGCGTGCCACGAGACCGAC
TTCAGCAAGCGGCACATCGCTGCTACTTCTGCTGCTGCTGCTGTTTGTTC
ATGCATGACGTTTTGGTGTGGAATTGCTTCATCCCTTCGACGTCAGTCCT
TGGCTATGTACGTACGTATTTATTTTTGTATGGCGCTTCATGTAGTTGCT
GGTTGTTTTTTTTCACCGTCACGTGAGATGGCCGCATCGTGTTGCCTTTT
AATAACACAGTCCATGGAGCAAATAAAAGTAAAATGACTACTATAATAAT
GCTCTCAATCACATTTGAAAGCCCCCCATTTGTACCACCGTCCTAGCACT
GTTAACCTGCAAGTGTCTTCTATTCGGTTTTACAGGCATTAGGTTCGTTT
GTTTTGTGCCCACGTCGTCCC back to topCoding sequence (CDS) from alignment at H-paniculata_contig526:27550..31870+ >mRNA_H-paniculata_contig526.12636.1 ID=mRNA_H-paniculata_contig526.12636.1|Name=mRNA_H-paniculata_contig526.12636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4272bp|location=Sequence derived from alignment at H-paniculata_contig526:27550..31870+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCCTCCGCTGTGGTGGTAGCTCCTCCGTAGGCTACATCCGGACGGT
TACGAGACGATCGTTGCGTACGTTGCATGCAACGATTGCTCCTGACACAT
CACAAGAAGAAGTGCCACCAGCTTCGAAGTTCACAGAGGGGGATGCATCG
AGCAGTAGACATCAACAGTTCGGAGGAACGGCTGATGTTGTGGGGGGTTG
GCGTGGTCGTCGAGAAGAACAGCAGCGAAGAAGCGACATGGAAAAGAGAC
GCCACAACAGTCCTGCCGTCCTTGCGACACAGAAGCCCTATATTGCTCGA
TTGAGGGCGGCAGGCACACAACAGAACTGGGAACAGGTTACGCGAGTTCT
AGACGAAGCCCTTGCTCTCGACAACGCACGAGCTGTCGTCTCTGTACATG
TGTACTCCGCCGCCGTGACGGCTGCTATACGGTGTGGAAAATGGAATGGG
GCGCTTGAATTGCTGGCTTTCATGAAGCAGGAGGGTGTTCAACCTAACGA
GTACACATACGGCCCCATCATCAAAGCTTATTCACGAGCGGGTCTGTGGG
AAATGGCGGAGACTCTGTTGCAAGAAATGCGCGAAGATGGATTACAGCCC
GATATTGCGACTTATAACCTCATCATCTTAGCATGCGGGAAGGCTGGCCG
GTGGGAGCAGGTGTTGGCTCTCTTGCGACAAATGTCGACGGATAAGCTCA
CAGCAGATATCAGGATGTATGGCCGTATAATCTCACTTTGCGAGAGTTCT
GGAGAATGGAAGCAGGCAATGGCACTTCTGAACGAAATGCAAAGGTGTGG
TATTAGGCCCGATGAATGCCTGTACAACTCCGTCATCGCCACTTGTGCGA
AGGTTGGGCAATGGGAGCAGACTGTGGCTCTTCTGAGACAGAAGCATACG
GTGGGTCTCCCGGTGGATTTATTGAACTACCACTCAGTAATCTCTGCTTG
CGGGAAGTCTGGGAAATGGAAACAGGCAGTGGATATTTTGAGCGAGATGC
GCACGGAAGGAATCGCCCCCGATGCTGTGGCTTTTACGGTGACGATCGGC
GCTTGTGCAAAGGCTGGCAATTGGAAGGTTGCCGTTGATCTCTTGAAGGA
GATGCAGGCTAAGCGTCTTTTACCAGATGCTAAGACCTACAGCTCGCTCA
TCTCTGCTTGTGGGAAGTTGGGAGAGTTGGAGCAGGCTGTTTCTCTGCTG
GACGATATGCAAAGATGCGGCATCAGCCCTGATGAATACCACTACACAGC
GGTTATGAGTGCTTTTGTGAAGGCCGGCCAATGGGAGCAGGCTGTGGCTC
TTTTGAGACAAATGCAGGCGCACGGAGTAACTCCCGACGTTGCGGTTTTC
AACTCTAGCATCACTGCTTGCGGGACAGCTCGCCAATGGGAGCAGGCTAT
GGATTTGTTCGAGGAGTTGCAAACATCGGGTCTCACCCCTAATGTCGTCA
CCTTCAACTCGGCCATCACAGCTTGTGGAAACAGTGGCCAGTGGGAGCGG
GGGTTAAATCTATTGGCACAAATGCAGAGCCAGGATGTTAATCCCGACGT
GGTGACCTACAATTCAGCCATCACGGCGTGTGCAGACAGCGGTCAGTGGG
AAAAGGCGTTGTCTGTTTTGGAGCAGATGGAACTTAACGGTGTTGTCCCC
GATGCCGTCTCCTACAGTTCGGCTATCTCAGGCTGCGGAAAGGCCGGCCA
GTTGGCGCACGCGATGGTGCTCTTCACGAAGGCAACAGCTGTTGGTCTTG
CACCTAACGCCTTCATACACAGTGCGGCCATCACAGCGTGCGGACACGTC
GGCGAATGGGAGAAGGCGATGTCTCTTTTGAGGCAGTTGCAGAAAGAGGT
AGGTACCCTTGAAGCGTCTGCTTACAACGCGACCATCAAGGCTTGTGGGA
AGAGTGGCAAGTGGGAGCACGCGTTGGCACTTTTGAGGGAAATGCGGGCG
GAGGGAGTGTCCCCTGACAATATTTCCTACAGATCGGCCATCATAGCTTG
TGGAAGAAGTGGTCAGCGGGAGCAAGCGTTGGCGATTTTCAGGCAAATGC
ACGCGGATGGTGGCGCCCCGAATCTCATTACCTACAACGCAACCATTCAC
GCTCTGGCGAGTGTGAAACGGCGGTGGACCTCGTAAATGGCCCTCCGCTG
TGGTGGTAGCTCCTCCGTAGGCTACATCCGGACGGTTACGAGACGATCGT
TGCGTACGTTGCATGCAACGATTGCTCCTGACACATCACAAGAAGAAGTG
CCACCAGCTTCGAAGTTCACAGAGGGGGATGCATCGAGCAGTAGACATCA
ACAGTTCGGAGGAACGGCTGATGTTGTGGGGGGTTGGCGTGGTCGTCGAG
AAGAACAGCAGCGAAGAAGCGACATGGAAAAGAGACGCCACAACAGTCCT
GCCGTCCTTGCGACACAGAAGCCCTATATTGCTCGATTGAGGGCGGCAGG
CACACAACAGAACTGGGAACAGGTTACGCGAGTTCTAGACGAAGCCCTTG
CTCTCGACAACGCACGAGCTGTCGTCTCTGTACATGTGTACTCCGCCGCC
GTGACGGCTGCTATACGGTGTGGAAAATGGAATGGGGCGCTTGAATTGCT
GGCTTTCATGAAGCAGGAGGGTGTTCAACCTAACGAGTACACATACGGCC
CCATCATCAAAGCTTATTCACGAGCGGGTCTGTGGGAAATGGCGGAGACT
CTGTTGCAAGAAATGCGCGAAGATGGATTACAGCCCGATATTGCGACTTA
TAACCTCATCATCTTAGCATGCGGGAAGGCTGGCCGGTGGGAGCAGGTGT
TGGCTCTCTTGCGACAAATGTCGACGGATAAGCTCACAGCAGATATCAGG
ATGTATGGCCGTATAATCTCACTTTGCGAGAGTTCTGGAGAATGGAAGCA
GGCAATGGCACTTCTGAACGAAATGCAAAGGTGTGGTATTAGGCCCGATG
AATGCCTGTACAACTCCGTCATCGCCACTTGTGCGAAGGTTGGGCAATGG
GAGCAGACTGTGGCTCTTCTGAGACAGAAGCATACGGTGGGTCTCCCGGT
GGATTTATTGAACTACCACTCAGTAATCTCTGCTTGCGGGAAGTCTGGGA
AATGGAAACAGGCAGTGGATATTTTGAGCGAGATGCGCACGGAAGGAATC
GCCCCCGATGCTGTGGCTTTTACGGTGACGATCGGCGCTTGTGCAAAGGC
TGGCAATTGGAAGGTTGCCGTTGATCTCTTGAAGGAGATGCAGGCTAAGC
GTCTTTTACCAGATGCTAAGACCTACAGCTCGCTCATCTCTGCTTGTGGG
AAGTTGGGAGAGTTGGAGCAGGCTGTTTCTCTGCTGGACGATATGCAAAG
ATGCGGCATCAGCCCTGATGAATACCACTACACAGCGGTTATGAGTGCTT
TTGTGAAGGCCGGCCAATGGGAGCAGGCTGTGGCTCTTTTGAGACAAATG
CAGGCGCACGGAGTAACTCCCGACGTTGCGGTTTTCAACTCTAGCATCAC
TGCTTGCGGGACAGCTCGCCAATGGGAGCAGGCTATGGATTTGTTCGAGG
AGTTGCAAACATCGGGTCTCACCCCTAATGTCGTCACCTTCAACTCGGCC
ATCACAGCTTGTGGAAACAGTGGCCAGTGGGAGCGGGGGTTAAATCTATT
GGCACAAATGCAGAGCCAGGATGTTAATCCCGACGTGGTGACCTACAATT
CAGCCATCACGGCGTGTGCAGACAGCGGTCAGTGGGAAAAGGCGTTGTCT
GTTTTGGAGCAGATGGAACTTAACGGTGTTGTCCCCGATGCCGTCTCCTA
CAGTTCGGCTATCTCAGGCTGCGGAAAGGCCGGCCAGTTGGCGCACGCGA
TGGTGCTCTTCACGAAGGCAACAGCTGTTGGTCTTGCACCTAACGCCTTC
ATACACAGTGCGGCCATCACAGCGTGCGGACACGTCGGCGAATGGGAGAA
GGCGATGTCTCTTTTGAGGCAGTTGCAGAAAGAGGTAGGTACCCTTGAAG
CGTCTGCTTACAACGCGACCATCAAGGCTTGTGGGAAGAGTGGCAAGTGG
GAGCACGCGTTGGCACTTTTGAGGGAAATGCGGGCGGAGGGAGTGTCCCC
TGACAATATTTCCTACAGATCGGCCATCATAGCTTGTGGAAGAAGTGGTC
AGCGGGAGCAAGCGTTGGCGATTTTCAGGCAAATGCACGCGGATGGTGGC
GCCCCGAATCTCATTACCTACAACGCAACCATTCACGCTCTGGCGAGTGT
GAAACGGCGGTGGACCTCGTAA back to top
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