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Homology
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: D8LI36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI36_ECTSI) HSP 1 Score: 217 bits (552), Expect = 5.650e-66 Identity = 110/131 (83.97%), Postives = 119/131 (90.84%), Query Frame = 1
Query: 424 EQLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDEDVNARGG 816
E+LDEVPL+VP VCKD KASLLVHLRDE LNF+GDTGAIGR++V GKK KG LTFDLKGQQF GQIIPSATV+VVGIG+TEAKVEGLFSEVCRL YKGNV DAMGG+VLKGEMD SYKFE+EDVNARGG
Sbjct: 54 EKLDEVPLIVPPAVCKDAKASLLVHLRDEALNFAGDTGAIGRISVGGKK-KGRGLTFDLKGQQFSGQIIPSATVMVVGIGKTEAKVEGLFSEVCRLDYKGNVFDAMGGEVLKGEMDDSYKFEEEDVNARGG 183
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A7C9A2T6_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A2T6_OPUST) HSP 1 Score: 73.9 bits (180), Expect = 1.770e-12 Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+PL++P V +++ LV E+++ SGD GA+GRV + +K + DLKG + I+PS T VV IG++EAK+E + ++ +L + NV DA +++G +D + F+ ED
Sbjct: 9 LPLVLPEKV---SRSKALVECEGESIDLSGDMGAVGRVIIAETPSKEPEMFLDLKGTIYKTTIVPSRTFCVVSIGQSEAKIEAIMNDFIQLAPQSNVYDAE--TMVEGTLDG-FSFDSED 122
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI001FB190C5 (DNA-binding protein BIN4 isoform X1 n=3 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB190C5) HSP 1 Score: 73.6 bits (179), Expect = 6.670e-11 Identity = 38/124 (30.65%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDEDVNAR 810
+PL++P V N+ LV D++++ SGD GA+GRV + ++ + D+KG + I+PS T VV G++EAK+E + ++ +L + NV +A +++G ++ + F+ D + R
Sbjct: 196 IPLVLPEKV---NRLKALVECEDDSIDISGDVGAVGRVVISNSSSRNHEMLLDMKGTMYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAE--TMVEGTLEG-FSFDSGDESDR 313
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A0K9NS44_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NS44_ZOSMR) HSP 1 Score: 72.8 bits (177), Expect = 8.380e-11 Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 1
Query: 394 EGPQTKRAKIEQLDE-VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDA-SYKFEDE 795
EG +K+ + + +PL++P V ++ L+ ++++ SGD GA+GRV + + + DLKG + +I+PS T +V G+TEAK+E + ++ +L NV +A +++G +D S+ EDE
Sbjct: 124 EGESSKKPSLHNVSSRLPLILPEKV---QRSKALIECEGDSIDLSGDVGAVGRVIISKNASGNDEMLLDLKGTIYKSRIVPSTTFCIVSFGQTEAKIESIMTDYVQLTPHSNVFEAE--TMIEGTLDGFSFGSEDE 254
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI000B7832D6 (DNA-binding protein BIN4-like isoform X1 n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B7832D6) HSP 1 Score: 72.4 bits (176), Expect = 1.800e-10 Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+PL++P V +++ LV E+++ SGD GA+GRV + +K S + DLKG + I+PS T VV IG++EAK+E + ++ +L + NV DA +++G ++ + F+ +D
Sbjct: 226 LPLILPDKV---HRSKALVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVIVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 339
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A803L260_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L260_CHEQI) HSP 1 Score: 72.4 bits (176), Expect = 1.850e-10 Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+PL++P V +++ LV E+++ SGD GA+GRV + +K S + DLKG + I+PS T VV IG++EAK+E + ++ +L + NV DA +++G ++ + F+ +D
Sbjct: 234 LPLILPDKV---HRSKALVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVIVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 347
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI0009F540D9 (DNA-binding protein BIN4 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F540D9) HSP 1 Score: 71.2 bits (173), Expect = 2.080e-10 Identity = 38/123 (30.89%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 430 LDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+ +PL+ P V ++ LV E+++ SGD GA+GR+ V + + L DLKG + I+PS T +V +G++EAK+E + ++ RL + N+ +A +++G +D + DE+
Sbjct: 104 VSRLPLVFPEKV---QRSKALVECDGESIDLSGDVGAVGRIIVSKGSSGNNELFLDLKGTIYKSTIVPSRTFCIVSVGQSEAKIEAIMNDFVRLEPQSNMFEAE--TLIEGTLDGFSFYSDEE 221
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A8B7CL13_PHODC (DNA-binding protein BIN4-like isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CL13_PHODC) HSP 1 Score: 71.2 bits (173), Expect = 2.210e-10 Identity = 36/120 (30.00%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+PL+ P V ++ +LV ++++ SGD GA+GR+ + + DLKG + I+PS T +VG+G++EAK+E + ++ +L + NV +A +++G +D + F+ E+
Sbjct: 115 LPLVFPDKV---QRSKVLVECDGDSIDLSGDVGAVGRIVISNASAGNQEMLLDLKGTLYKSTIVPSRTFCIVGVGQSEAKIEAIMNDFIQLEPQSNVFEAE--TMIEGTLDG-FSFDSEE 228
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A2R6Q9E3_ACTCC (DNA-binding protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q9E3_ACTCC) HSP 1 Score: 71.2 bits (173), Expect = 3.880e-10 Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 367 DKRGRDGGREGPQTKRAK--IE---QLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
DK+G DG E + + A+ IE +PL++ V N++ LV E+++ SGD GA+GRV V + + FDLKG + I+PS T VV G++EAK+E + ++ +L + NV +A +++G +D + F+ ED
Sbjct: 163 DKKGNDGDVEVAKEEIAEKHIEPHFSSSRLPLVLSEKV---NRSKALVECEGESIDLSGDVGAVGRVVVSDNPSGNQEVFFDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLTPQSNVYEAE--TMVEGTLDG-FLFDSED 305
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A803MJR7_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MJR7_CHEQI) HSP 1 Score: 70.5 bits (171), Expect = 4.790e-10 Identity = 39/120 (32.50%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 439 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 798
+PL++P V +++ +V E+++ SGD GA+GRV + +K S + DLKG + ++PS T VV IG++EAK+E + ++ +L + NV DA +++G ++ + F+ +D
Sbjct: 137 LPLILPDKV---HRSKAVVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVLVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 250
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Viridiplantae |
| Seed ortholog score | 71.2 |
| Seed ortholog evalue | 9e-10 |
| Seed eggNOG ortholog | 161934.XP_010671274.1 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000902,GO:0000904,GO:0001558,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007275,GO:0008150,GO:0008152,GO:0008544,GO:0009058,GO:0009059,GO:0009330,GO:0009653,GO:0009888,GO:0009913,GO:0009987,GO:0010026,GO:0010090,GO:0016043,GO:0022402,GO:0022622,GO:0030154,GO:0030307,GO:0030855,GO:0032501,GO:0032502,GO:0032989,GO:0032991,GO:0034641,GO:0034645,GO:0040008,GO:0042023,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0044786,GO:0045927,GO:0046483,GO:0048364,GO:0048367,GO:0048468,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0051128,GO:0051276,GO:0060429,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0090558,GO:0090626,GO:0097159,GO:0099402,GO:1901360,GO:1901363,GO:1901576 |
| EggNOG free text desc. | DNA-binding protein |
| EggNOG OGs | 28MC6@1,2QTVM@2759,37MCB@33090,3GCGZ@35493 |
| Ec32 ortholog description | BIN4 component of topoisomerase VI |
| Ec32 ortholog | Ec-04_003090.1 |
| COG Functional cat. | S |
| Best tax level | Streptophyta |
| Best eggNOG OG | NA|NA|NA |
| Exons | 5 |
| Model size | 1017 |
| Cds size | 897 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5245.12615.1 >prot_H-paniculata_contig5245.12615.1 ID=prot_H-paniculata_contig5245.12615.1|Name=mRNA_H-paniculata_contig5245.12615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MKGSKKRSTPEESKDSDGESMVDSDYAGSNAGDDDTILMSQTSLVSASQN
TLLSQESISQSQPEPGADEDGKGSGGSPMGVGDKRGRDGGREGPQTKRAK
IEQLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKK
TKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYK
GNVLDAMGGQVLKGEMDASYKFEDEDVNARGGGTGPGGEVTDEGEEAGRK
GKGGSSSAKTPKSVGRKKGSSGAKGGGKSSSAKKGGKASSSSSGKGKK* back to topmRNA from alignment at H-paniculata_contig5245:486..11903- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5245.12615.1 ID=mRNA_H-paniculata_contig5245.12615.1|Name=mRNA_H-paniculata_contig5245.12615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11418bp|location=Sequence derived from alignment at H-paniculata_contig5245:486..11903- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCTATGTGAGCAGGTGTTCAGGATTGCCTATCATGAATCTGTTACGCGT
CTAGCACGGAGGTTTCGCGTCTGTCTATCGACCAATTTGCGCCCCTGTTG
TGTAGGACTACTTTGGAGAAATGAAAGGATCCAAGAAGAGGTCGACCCCC
GAGGAAAGCAAGGACTCGGATGGCGAATCAATGGTAGACTCGGACTATGC
TGGGTCAAACGCGGGGGACGATGATACAATCCTTATGTCACAAACGTCCC
TGGTTTCAGCTTCCCAGAACACACTACTGTCGCAGGAGTCTATTTCCCAA
TCACAACCTGAGCCAGGGGCGGATGAGGACGGTAAGGGTAGTGGCGGCTC
TCCTATGGGTGTCGGGGATAAGCGAGGTAGGGACGGGGGAAGAGAGGGTC
CGCAGACGAAGCGTGCAAAAATCGAGGTGAGATTGTCGCTTTCAATTTTC
AAAAACGGGGCGCTGTGACTGTTGCTTTGATTTAAAAAATATCCCCGAAT
ACGTGTACAAGTACAGCCTAGGAGTACAAATGTAGGCTGTATTTTGCCTA
GCTGGGTGTGTTTAGTATTTCCACTGAACTTGAAAAGTAGTATCTAATCC
TTCCCTGTAATATCGGGTAGGGGTCCCCCCGAGCTAATGGGCTCAATATT
GGGGTGATTCATTATACAAGACTAGCAATTCAGTCTCGGCATAGACATCG
GTGGAAAACACTGGAATAAAACATGCATTAATGTTCTGAAACGAGCCAAT
AACTGCCTACACTAAATCACAAAAACCTTGCACACAGTGTACATACACAG
CATCGGGTAGTCCGAACCGGCGAGGCCATTTTTTGCCATGACTGCTGTCT
TGAGTTTTGATTCTTCTGCGAGCTTGCGTTGCCGGGTAAAGCTGCCACAG
CTACCCCTGTTCATATCCCCACCCCTCACACTAGCCCTTCGCGTGTCAAA
TCTGTCCCGTGTATCGTCTGAAATCGGCCAAATCACTGCTCCCCTCCCAG
TATGGCAACCGCCAAAACGGAACGTCCTCGAGCCAGGTTGGAGGGTTCGG
GCAAGTTCGGGTATTATAAGACAATCAAATGAAGTGAAACAAAATCAAGC
ATTTTTTTACGACCAACTCCAGTTGCACCAGCAACGGTTTAACCCCCTTA
CACCTGGAAAAGAAATGAGGGGAAGAAACAGCTTTGTTCCAGAAACCCAA
CGCCTAATTACCAACTTCGGTAGACGTCAGTCATATTGTCATATTCCGAC
TGCCACTACTGTACTGTGGCAGACCGCCTGCTGCTGTGCCTGTAGGTCCC
GTTACTCATGACAGGAGGCCACACACGCAGCGGCTACCATTCGCCACGGA
ATCCTCAGGACATGCTGGTGCCTGCCAGCTCTCCTCGCTCTTCTTTGTGT
TGCTGCAAATATGGTGCTAAACTCCGTAGTACAATAACTGTACTGCATGC
ACCAATGCTGTGTTTTTTTCGTCGCCGGGCGAAACTCTATGGCATCATGC
TGTTTTCGGACTGCCACCGCTCGATAGAACCAGTGTGTGTACTGCAGTCT
GTCAGCTATACCACGTGTACATAAAGCACACAGCGCTCTGGCTGCTGTGC
GGACCCCTAACGTACATGAAAATATTTTTAAAAGTCGATACCCTTTCAGA
CCTAGTGTCGACACCTGATCTCCAAACTTCATTCAGATAACCCAAACACG
TCGCAGTCCCGCGCTACTACTTGTCATATGCTTGTCGACATACAGGGCAA
AACAATTATGTCCATCGAAATTCGCCCCCCCCCCTCCTGTCGACGCGGGA
CTGTAAAAAATCGCGGGTCGAAATTTGTCGCAATGCAGGTTTGTTGGTCT
GTAAGGGTTGACAAGTCGCTGCAGTATAGTTCCAAACGGACAGCATAAGA
ACCATGCCGAACACATAGAAGGGATTAATTGTTTGTGGGCTTATTCGTCG
ACGTCTGTATAGAGATACTAGGAAATGCAGCCCCGCTCCCAGGTATACAG
GTAGTGTCATAATTTAGCACAGCCGGCAGTCTGGCTGTATAAAATACAGA
GTATCGATAGAGAGAAAGATATATATATATATAGTGGGCGAACGGTGTGG
TATATTGCCGTCAGACGTCGTGCCCTGACTGTTTCGTGTTCTCGAAGCAT
AGAATATAGACGGCACCTCCATGGAAACTATCACTCCATACCCTTTATTA
GAGCAGCGCAGCAGCTCATGTCACTGTGATGATGACAGGGTAGGATGTTT
ACAGAAAATGCAGGCCAACCCTTATTTGTTGGTTGTTGATGCAGTTCAGC
CAAAACGAGAAACGAGCAAAACATAATTATCGCCACGATGATCCGTTTGT
AATCTGTCTACGCACATTGTATTGGCCATTTTCCAATTTTCACGGATGTC
GCGCAGGCCTTCGCCCGCCTGCTTTTTATGTATGACACCCCCGCAAGAGC
CCTGAATTTGTCGACTCCACATGTTCGGAATAGTTAAGCGTGACGCTAGA
TCCGTTTGCCCTCCTTTCACCTAGGGGGAGGGAAGTGACAGGAAGAAACA
GCCATGATCCATGAGACGCAACCCTTCATTACCAATTACGTTATCGGTCA
CGACGTCATTCTCCGCCTGCGCTGCGGCACCGCTTGCCACCGGCATGCTT
TTACTCGCTGGTATAGCGATATTGCCCACAGGGTCCGGGGGAGTGACCTA
GACGGCATTCGGCGGTAACTCAGATAGTGCACTGCACTGAGCCATGCCTC
TTGTGTGTTGTGCGGACCAACTTGCCTCATTTCAGTTCGATCGGTTGTTG
CGGGCTCTTACGTGTGCCTTTCTGATTGGCTTATTTGAAAAATTCGGTTA
GGTCTGACAAGTCAGAGTAATTTCGGGCACATGTTGTCAACATTGGACCA
CCCCTATTGCTCCCCTAACTGCGTAATATAAAAACACGACAAAAACAGTA
AACGAAATGTAGGTATGCTTAGCATCTTGAAGTTTCTGGATTACTTGTCC
ACAAACTGAAAAGACTACAAGGGCGGGGGGTGGGGGGTTGTTCGTTCTAG
TTGTTAGATCATTGACCACACGTGCTCGGGCGGGTGGAGCTGTCCTTCTA
TCAGAGCGATTTCCTATGGCCAATCGCTTTTCCTACGTTGTCAAATATGG
CTCAAAAATGTTTTACCTACGTTATCTACCTCAATCTTCGTGTGTTTAGG
CTAATTTCGATCTCCTTGAACCGCTATAGCCTTCTTTTTGCGGTCGCAGG
ATTCGAATGCGTCTCTATCGCATCCTTCGATTTATTCCTCTTTTTCATAC
GGGGGGCATTCTCCCACGATGTGGATTCGGTGTTCGCACGCACTATCGCA
GTCACACTTGAACGCATCGTCGTCGACCTCGTTTACTTTCCTAAGCTACA
TTCCTTGAGGTCAAGATCTCCCATCCTAAATTTGCCTTTCATCTGTTTGC
CTGCATGTAATGGGCGGTGGGGCGGGTGCGTCGCTTTGCATGAAGAGGTA
GAATCTTGGCCCCGGCAGTTTTGGATCAAGACCGCGAAGTGGCACGGAAT
CCTGGAATCCTGTCTATCTAAAACGTGTGCGTTCCTGTACATTGTCCTGT
CGACGTACTGTGTTCTTTTTTCCCCCTTCTAATCTCTGCCTAATCCTAAT
CCGGGGGTAGACGGGTATAAAAAAAAACTCGAGAAAATTTCTCAGGCTAT
TCTGTAGATATCTACGGATTGTGCATGTGATATCCTTTCAGTTCTGTTGT
CAGCGTGCTTGATGTATGGGTCGTCATGTGCTTTTCAAGCCTTCTCGCTG
AGCTTACTGCTGGGCCTCGAACTTGTCTGTGACATCTGCTCTGTGATACA
GTCTTGTGTACGTCCCATCTCACGATCAAGGCCGAGCACACACTACCCGG
TGGGTGACTGCCTTTAGTGGTGTGTGCCACAAGAAGCCGCACACCAGGGG
AATGCACTCGTACACCGGGTTCTGACGAGGTTTGACTAAAAACGTGATGC
GTGTTCATGTGTAGATATGAACCATACTTACCCGTTCTTTGTCAATCGTT
TTCTGAAGAGGAACAACGTTCGGCCAATACAGATGCTCCTCTCGCCCCGG
GGCCTTTTTCTTTTTTCCGACACAGATCAGCTAGATTCCTCTTCAGCTAC
AACAGGCAAAGGATCCTAGGGATATGTAATAGGATACCGCACTGTATTCC
AGCCCCCGTACACAAAGCGGAACTCAAGGAAGGGATCCATCCACTCGCTG
GTGCCCGTGTAGGCAAACAAGACAGAAAATAACGTAAGCGGAAGAAAAAA
GTCTCTACCTAACCTAAGTAGGTACGCCGGCGCCTTTACCCACCTAATGT
GCAGTAGCCTTGTCAAGGCAGAAGAGCAAAAAGAACGAAAAAAGTAGCCG
TGGCAGCAAGATCAGTTCCTCCTGAGCTGAAGCTTATTCTACCGCCGTCA
GTCCCCCTACCGCTGTACATTTGATCCGGAGTATTGTTGCCGCCAACTGT
AGACAACAGGAGCCACCGTCTGTAAGAAGCACCGCGTTTCTCTACACAAA
ACCAAAGATGTGCGTAGGAAACACTCCGTGCTAAAGGTTGATCTTTCAAC
GAAACCTGTAGTGAGGTTAGCAGTTGAGGAAAGGAGAATGGGGGAGCTTG
GGGTGAGAGGACGTCAACTGCGCTCTATTTCATCACTATGCGTATCAGCC
TTGTAGCTGGTCGTCCCGTCATCCAAGCACTGGTCTCCCTTTTCCACCTT
GCCCTAGTTCTCGATTTGCTCGTCGTCGCCGTTTCTTCTCCAGCCGTTTT
TCTTTGTCGCCTATGCCCATCGTCCGACAATAATTTGACACAAAATAGAT
GGCTGCTCCCTATACGCGTCCTCCTGACATGTGCCTGGTTTTTTCTCGTG
CGGTGGGGGTCAGCACTCCTAGTCACGTCTCGACGATGATCGCTTATGAC
GTCACCTCGTCGAGTGCACCCTGTCCTAGCTCTGCGATGTATCCGTTGCA
TGGCGATGATGGGCCCCGGAGTACCCTCGTCACTCTCGTTTTTTATGGTA
TGGCGTGTATCGACGCGCGGATACAGTGGTCGCAGGCTGCGAAAGCCGCT
GCCGTGGCGTACTTTGCGAACGAAAGACGCGGGTGGAAAATACGTGAATC
AACCAGCATTACCCCGACCACACCCATCGATCTGTTATCCTTGATCAATT
CCAATCGGGCCTGAAGTAGCGAGAAGGGATGCCTAACCCGTGTAAGGGGA
GCGAGCACGACACTCAAGTCTAGGCTTTCCTTGTGAGCACAGGGCACAGC
ACGACAAAGTCAAAGCACCAGGACACAGCGATACCACTTTTCGTTTTCTA
CTATGTACTCCAGTCACGAGACCATTTCATACTGTTATGTTTTCCTTACG
CCGGTCAAATCACGACGCTTTTCGTGCATTGAAGAGTATGACCATGCAAG
ACCGCGGCAAGCAAACGGAACTCCTAGGCTCAGTCATTTTTCTGTACCAA
ATGTAAGAAATATTGTCTGGACCACAAACCAATTGTTCCAATAAAAAAAT
AAATAGATTTGTCTATTTGCGGCCTCTTAAATTCGTGTTTGTACTTGTGT
TATAACGGAGTCACGTCCAGGTAACCAACCCGTTCAGTCAAGTCATACTG
CAGTGTTCTATCCTCGACCCCCGCACAACGGCTCCATGTGCTCGCAATGG
CTCGACACGCTCACATGTAGGCCGAGCGTCTAGGAAGATCCGTTGTTAGA
TCTTTACTTCGACTTTAGAATTGAAAAAAAAAAAAATGAACATCGATCAC
CTCCTTGGCGAATCTGTTGTGTATTTAACCCTCTTACTCCTGGGGGCCCG
GGGTGTGACATCTTGTGACATGCGGAATTTCACAATCCCGTGTCAGAACA
TGTGTGGGGTGTAGCGTTTTGTGACACTTGAATATAATGGCCTGTGATAT
ACCACGAAATGAATGGAATCATGTGACTTGACAGAATTTTATATTTAAAC
TAGTATGCAACCATGTAACGCGAGGAGCAAAAGGGTCAAAGCTCATAACT
TTCATTCAACCTTTGCCCATCCACGGCTGCTGTGCTCCAGCCGCAGCGCC
ATATTCTTGGCAGTTGACGTAGAGGTAGTACAGCTGGTAGACTGCACAAC
ACACGTTGGTTCAATCGAGCGGTGACAGTCAGCTGACAAAGCGCCAACGG
CATGATACAGTCAGGGAGAGTTGCGCTTGGCCACGGAAGAAACAGTCAAT
AGGATGCATGGAGTACAATTGATGTACTGTCTGTACTGCTGCACAACCAT
TTCTGTTTGCGCGGTGGTACTGTGCTAGAACATGTGGCCAGAGGGGTACC
TTGTCGCGGATATTGCAACGTCCCACGTTGCGGTGAGGTTGAAAGTGTGC
ATAAAACGTATTAGGAGCGTTGTATGTACTTTGTCAACCTCACCACAACG
TCCTACTACGCTATGTAAACACTGCCAACATTACCACAACGTGGACGTTG
CAATATCCGCGACAAGGTACCCCCCCTCTGGCCATATGTTAACGGCAACA
CAATGAGGGGAGGGAGAGATGATGCAGGCACCAGCATCTCCGGAGAGTTC
CTTAGCGAGCGATATCAGTTGCGTATATGGCGTCCTTTTATGCCTGATGG
TACCCACAGGCACAGCAGCGGCAGGCAGCCTGCAACAGTCATAGCTGGAG
CATACAAGACGGGTGATTGGAACATACTACACGAGTGACCTTAGAACACA
ATGGGTAGTTCAGCGTTGGGCCTCCTGAAAAAATATGTTCCTTTTGTCAA
TGTAGTTTTTATTTTTCCAGGACTTAAAGGGTTTAGTAAGGATACGTTAC
GGGAAACAACCTTCAGGTAATTTCATGTACATAACTAGTAAGTACGTTTT
TTGCAACATATTCTTGTTATATAGTACGTATCGCTCTGCCCTCCTCACAC
AGCTCGTCCTTTCCGACGTTTGATTTCCCTTGAAACCGCCAGCAACTGGA
TGAGGTTCCGCTGCTGGTACCTGCGACCGTGTGCAAAGACAATAAGGCCT
CTTTGCTCGTGCACCTGCGAGATGAAACCCTCAACTTCTCAGGTACCCGC
ACTATTGCTTACAGTAAGTATTTACCGGTTCATACGTTTTGGCCACCATA
AAATCGTTCAATGAGAACAACAATTTTTACCGTTGGGCGTGATTTGCTAG
TAATGCAGCCACGGCCTGTGTCCGTGCAGTCCGTGTTTTTCCCTCTCGCC
CATTGAGTCATTCTCCAAAAATCCATGACTAATGCTCAAAGGCTCGCTGC
GTTCGCAATGACCTCAGACGCTGGTGTCTGTCGAGATTTGTTTTTTGAAG
CTACTTTGGGAACAAAGTTGAAATATTACTCTGAAACGGTCAGTCCTGAC
CGTCACCTTATTGGTATGTATTTCCTAACATGACATGATATTCGTAGAAA
TCAGAACGGCTAACGAAATCAGAACGGCTAACGAAATCAGAACGGGTAGC
TTTCTTCGGCCTTAGCCCGAAAGACTGACGAATCAGTCAAGGCACCCCGA
CGAGATACTGGAGCCATAACTCGTGTAAACAAACTACCGCTTTCAATTTT
CGAATCGGATTAGTAGTGGCGAAATTGAAAAAATAACATGTAAATTGTGT
GAAATGGGACCCCACAAACACCGAAGCAGATGACACATCTTTTTCAACTT
TCGCCAATAGTTGTCCGATTCAATTTTTTAAAATATTTGCACGCGTTATG
ACTGTATTTTCTCGTCGGAATGTCTCCACTGAATCGCCCGTCTTCTAGTC
CAAAATCAAACAAAACTGGCCATTGTTATTTCTACGAATATGTTGTATGT
AACTACAACCATGAAGATGGTGAAAGGGTGGCGCATTCCTGTTTTGATTG
ATTTCTATTTTTGAGTGGTCGTTGTGAATTATGCTGGAAACTGGAAACAG
TGCACCCCCCCCCCCCGGACAAATACGAATACTCGCAAATGTTTTTCACA
AAAAACTGAAAGTACTCGCCTGAGTTTCAGAATGAGCGGACACATACAAT
AAATACTTAATACCTACCTCTGTCCGTTCGATTTAAGAGTATTATTAGCA
GTCGTGGATGATCCTGGGCATGCAGAATACACAAGCTCATTCTGAAACTC
AGGCGAGTACTTTCAGTTTTTTGTGGAAAACATTTGCGAGTATTCGTATT
TGTCCGGGGGGTGAAACAGTGCGTGTAATGTCTTTGTCCTACGCCATCGC
ATCCTTGTTGACGACTCCGGCCAAATAGTTATCGCAAGACCTACTGTAGT
GTTTCATACCCTCCTCAACTGGCAATAGCCTCAAAGAGTGCTGTTGTACA
CTCAATACACTATTTTTTGTGCCCCAGCCAACTAAGGCAGCGATACATAT
CCCGCGGCATTTCGACTGCTTCGAGCTTGTACCCGAACTGACGCGAGTCT
TGAGACACAGCACGCGCAAACCACAGCATTTTACTTGGAACAAGCCGAGA
ATTACCGCACCATCGGCGACCTACCGATCTACTGAATTAGGAAAGTATGC
AGGATGACTCACGTGCTCGAGTCGTATTTGACGTACCATTTACGTTACCA
TTCCACTCGCCCCCAGACACGCATCTCTCCGCACGCCTCATCGCGTTTTG
CGCGGTTCGGGTTGCGATATTTTCCCACCAGGCGACACCGGTGCGATCGG
ACGTGTGGCGGTGCACGGCAAAAAAACCAAGGGCAGCAGATTGACGTTCG
ACCTCAAAGGTACGATGGGTGGCCCTACATAAGGCTCACCATTAATAGCG
GCAAACCTAGATGACACTACAATGAATACAATTGTAAAATAGGGCTCAAG
GCGGCAGGCCTGGGTGGCGTTGGATATGGCAGGTATACACTGGTATCAGA
GCCTGGGTGGTCCTGGGTACGGGACTGTAGTAACATGCCTGTGTTTGTGG
TACAAAGGTACACAAATAGCACGCCTACATGGTCCTATGTAAGGTACGCT
AGGGACAAGTCTGGATGGCGCCATTCAAGAGACACTAGCAGCAAGCCTCG
TTGGCACCATGTAAGGTACACTAATGGCAAGCCCACAAGTTCACCTCTTT
CCCTGGCCGTGTCTTGTTCAAATGCGGTTCCTGAACTACAGTCTTGGAGC
TGAAGATGTTTTTTTTCTTCAGCAGATCAGTTTAGTACAATCGCTCAGAC
CCGCGCTAGTTTAGCAAACTTGAATTGAACCTTTTTCACAGGGAATACCT
GTTTAGGATAGCATGTTTTCACTCCCCGCACAAATACGAATACTTGGCGT
AGTTGCCACCAAAATTGAAAAGTATTTGCCTGAGTTTCAGAACGAGCAGA
CACATGAAATAAAATACCCACCCGTGTCCATTCGATTTACGAAAATTATT
AGCAGTCGTAGATGGTCAGGGGTACATCTAATACACGAAAGGAAATGTAG
ACATGTTTGGGCGAATGCCTGGATGTGGAAGCAGCGGAAAAGGTTTTTAC
CTCAGCCTTCCGGGGGTTAAAAAAAATCTAATACACGAGCTCATTCTGAA
ACTCAAGCGAATACTTTTTAATTTTCGTGGCAAGTACACCGAATATTTGT
CTCTATCCGCGGGGTGCAAATTTACAAGCTTGCGAACGCCATAATGTATG
TGTAGCAAATGGTTGAATAGTTTCCCCCCCTGAGCTGTCTTGTTGAAACA
ACCGTTGTAACCGTTGTCATCGCGGGCTTATATATATAAATATATATTAT
ATATATTATATATATTATATGGGACGCAAAAAGCACGGTCTCCTTCCTTG
CCTGCGCAGCGAACGACAGCCCCATTTTTCACGTACGTACGTATCGCCTT
TTGAAAAAAATGCCGTTCACGTGCGCTGCCGTATGTCGTCCCTACCGTTC
ACGATTATGTTCTGATCACCGCTCTCGCGGACAGACTCAAAATCATCAAA
ATCGCTGTTAATTTTTTGCAACTTTATTGATGAAAATATTTTCCTTTTCT
TGGTGTGTGTTTCAATCAAGTTTAGGAATTGACCCAAATTAAAAACCGCT
CGCTGCAACTGTTATGATCCCCTCTCCATTCGTCTCTCTGTATGTGTGTT
GAAAATATTCTGTGTCATCAACATCGCCACCACCATCATCATCGTTACAA
AAATACACACACATACACAGGGCAGCAATTCGATGGCCAAATCATTCCAA
GCGCCACCGTACTCGTGGTGGGAATCGGACGAACAGAGGCCAAGGTGGAA
GGCCTGTTCAGTGAGGTCTGCCGCCTCGGGTATAAAGGTAACGTCCTGGA
CGCGATGGGCGGGCAGGTTCTCAAAGGTGAGTGACTATTTTCAAGGCCAA
CGTAACGTGGTGGTGGTGGTGGTGGTGGTGGTGATGATGATGGTGGTGTT
CCAGGGGACTCTGGGTCAGGTACGCTACTGGACTGGCGACAGGTGGCGAC
AGTGTCTGAGGCACTGGCCTAAGCAGTCTGTTATAAAACCTGGCGAACTG
TTGTCCCACAACGTTGGGGATATGGGATAGTAAAATGATATTGCCCCCAT
CCCCCGATTGGCGAGAAAACGATACTTTCCCCTCTCCGTGGAGAATTTTC
TGGAGGTTTTCCGGGTTTCTAATATCCTACCCCCCGCTGAACCGTTAAAT
GACTCCTAGGCGCACGCGCGTGAAGTCAAATCTTATTGGTGTTGTTTTGC
CAGCAGCGTGAAAAGGAGGATTTTGGAGATCCTCGACTGAGCACTTGTGT
ATAAAATTTCCCAAGTTATCAGGTCTCCACGGTGGGGTAGCTGTTTTCAA
GTACTTCCTTATTTAAATGTAACTCATTTGGATCTCTGCATTGCACCAGT
GATCAATCGTAGACAAGAAAAAAAATCGGTTCTCAAAAGGTGGTTATGCC
ACTTTATATCCCCCCCCCCTACTCAACCAATAACTTGACGGCAGAAACAC
TTGGATACTTTCTTTTCTACAGAGACCAAAAAGCGTAATGGCATCATTCA
TCACCATCCACCCACTATGCTCATTGACATGGCCCGAGAGTGTACCCAGG
AATACTGAACGAAACCATGCATTTATGATTAATTATTCAATATCTATATA
TATATATATTTTAATTCTATTCTATTTTATTTCTATTTTATTCCAATTCA
ACAAATTTCAGGAGAAATGGACGCATCCTACAAATTCGAGGACGAAGACG
TGAATGCTCGAGGAGGGGGGACGGGGCCTGGCGGGGAGGTGACGGATGAA
GGGGAAGAGGCGGGCCGCAAAGGAAAAGGGGGAAGTAGCTCCGCCAAAAC
GCCGAAGTCTGTTGGCCGAAAAAAGGGATCTTCCGGCGCGAAGGGAGGCG
GTAAAAGCTCCTCCGCAAAAAAGGGAGGGAAAGCGAGCAGTAGTAGTAGT
GGTAAAGGGAAAAAGTAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig5245:486..11903- >mRNA_H-paniculata_contig5245.12615.1 ID=mRNA_H-paniculata_contig5245.12615.1|Name=mRNA_H-paniculata_contig5245.12615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig5245:486..11903- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGGATCCAAGAAGAGGTCGACCCCCGAGGAAAGCAAGGACTCGGA
TGGCGAATCAATGGTAGACTCGGACTATGCTGGGTCAAACGCGGGGGACG
ATGATACAATCCTTATGTCACAAACGTCCCTGGTTTCAGCTTCCCAGAAC
ACACTACTGTCGCAGGAGTCTATTTCCCAATCACAACCTGAGCCAGGGGC
GGATGAGGACGGTAAGGGTAGTGGCGGCTCTCCTATGGGTGTCGGGGATA
AGCGAGGTAGGGACGGGGGAAGAGAGGGTCCGCAGACGAAGCGTGCAAAA
ATCGAGATGAAAGGATCCAAGAAGAGGTCGACCCCCGAGGAAAGCAAGGA
CTCGGATGGCGAATCAATGGTAGACTCGGACTATGCTGGGTCAAACGCGG
GGGACGATGATACAATCCTTATGTCACAAACGTCCCTGGTTTCAGCTTCC
CAGAACACACTACTGTCGCAGGAGTCTATTTCCCAATCACAACCTGAGCC
AGGGGCGGATGAGGACGGTAAGGGTAGTGGCGGCTCTCCTATGGGTGTCG
GGGATAAGCGAGGTAGGGACGGGGGAAGAGAGGGTCCGCAGACGAAGCGT
GCAAAAATCGAGCAACTGGATGAGGTTCCGCTGCTGGTACCTGCGACCGT
GTGCAAAGACAATAAGGCCTCTTTGCTCGTGCACCTGCGAGATGAAACCC
TCAACTTCTCAGCAACTGGATGAGGTTCCGCTGCTGGTACCTGCGACCGT
GTGCAAAGACAATAAGGCCTCTTTGCTCGTGCACCTGCGAGATGAAACCC
TCAACTTCTCAGGCGACACCGGTGCGATCGGACGTGTGGCGGTGCACGGC
AAAAAAACCAAGGGCAGCAGATTGACGTTCGACCTCAAAGGCGACACCGG
TGCGATCGGACGTGTGGCGGTGCACGGCAAAAAAACCAAGGGCAGCAGAT
TGACGTTCGACCTCAAAGGGCAGCAATTCGATGGCCAAATCATTCCAAGC
GCCACCGTACTCGTGGTGGGAATCGGACGAACAGAGGCCAAGGTGGAAGG
CCTGTTCAGTGAGGTCTGCCGCCTCGGGTATAAAGGTAACGTCCTGGACG
CGATGGGCGGGCAGGTTCTCAAAGGGCAGCAATTCGATGGCCAAATCATT
CCAAGCGCCACCGTACTCGTGGTGGGAATCGGACGAACAGAGGCCAAGGT
GGAAGGCCTGTTCAGTGAGGTCTGCCGCCTCGGGTATAAAGGTAACGTCC
TGGACGCGATGGGCGGGCAGGTTCTCAAAGGAGAAATGGACGCATCCTAC
AAATTCGAGGACGAAGACGTGAATGCTCGAGGAGGGGGGACGGGGCCTGG
CGGGGAGGTGACGGATGAAGGGGAAGAGGCGGGCCGCAAAGGAAAAGGGG
GAAGTAGCTCCGCCAAAACGCCGAAGTCTGTTGGCCGAAAAAAGGGATCT
TCCGGCGCGAAGGGAGGCGGTAAAAGCTCCTCCGCAAAAAAGGGAGGGAA
AGCGAGCAGTAGTAGTAGTGGTAAAGGGAAAAAGTAAGAGAAATGGACGC
ATCCTACAAATTCGAGGACGAAGACGTGAATGCTCGAGGAGGGGGGACGG
GGCCTGGCGGGGAGGTGACGGATGAAGGGGAAGAGGCGGGCCGCAAAGGA
AAAGGGGGAAGTAGCTCCGCCAAAACGCCGAAGTCTGTTGGCCGAAAAAA
GGGATCTTCCGGCGCGAAGGGAGGCGGTAAAAGCTCCTCCGCAAAAAAGG
GAGGGAAAGCGAGCAGTAGTAGTAGTGGTAAAGGGAAAAAGTAA back to top
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