prot_H-paniculata_contig5245.12615.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5245.12615.1
Unique Nameprot_H-paniculata_contig5245.12615.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length299
Homology
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: D8LI36_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI36_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 1.540e-66
Identity = 110/131 (83.97%), Postives = 119/131 (90.84%), Query Frame = 0
Query:  102 EQLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDEDVNARGG 232
            E+LDEVPL+VP  VCKD KASLLVHLRDE LNF+GDTGAIGR++V GKK KG  LTFDLKGQQF GQIIPSATV+VVGIG+TEAKVEGLFSEVCRL YKGNV DAMGG+VLKGEMD SYKFE+EDVNARGG
Sbjct:   54 EKLDEVPLIVPPAVCKDAKASLLVHLRDEALNFAGDTGAIGRISVGGKK-KGRGLTFDLKGQQFSGQIIPSATVMVVGIGKTEAKVEGLFSEVCRLDYKGNVFDAMGGEVLKGEMDDSYKFEEEDVNARGG 183          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A7C9A2T6_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A2T6_OPUST)

HSP 1 Score: 73.9 bits (180), Expect = 1.160e-12
Identity = 42/120 (35.00%), Postives = 71/120 (59.17%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +PL++P  V   +++  LV    E+++ SGD GA+GRV +    +K   +  DLKG  +   I+PS T  VV IG++EAK+E + ++  +L  + NV DA    +++G +D  + F+ ED
Sbjct:    9 LPLVLPEKV---SRSKALVECEGESIDLSGDMGAVGRVIIAETPSKEPEMFLDLKGTIYKTTIVPSRTFCVVSIGQSEAKIEAIMNDFIQLAPQSNVYDAE--TMVEGTLDG-FSFDSED 122          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI001FB190C5 (DNA-binding protein BIN4 isoform X1 n=3 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB190C5)

HSP 1 Score: 73.6 bits (179), Expect = 4.130e-11
Identity = 38/124 (30.65%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDEDVNAR 230
            +PL++P  V   N+   LV   D++++ SGD GA+GRV +    ++   +  D+KG  +   I+PS T  VV  G++EAK+E + ++  +L  + NV +A    +++G ++  + F+  D + R
Sbjct:  196 IPLVLPEKV---NRLKALVECEDDSIDISGDVGAVGRVVISNSSSRNHEMLLDMKGTMYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAE--TMVEGTLEG-FSFDSGDESDR 313          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A0K9NS44_ZOSMR (Uncharacterized protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NS44_ZOSMR)

HSP 1 Score: 72.8 bits (177), Expect = 5.340e-11
Identity = 41/136 (30.15%), Postives = 75/136 (55.15%), Query Frame = 0
Query:   92 EGPQTKRAKIEQLDE-VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDA-SYKFEDE 225
            EG  +K+  +  +   +PL++P  V    ++  L+    ++++ SGD GA+GRV +    +    +  DLKG  +  +I+PS T  +V  G+TEAK+E + ++  +L    NV +A    +++G +D  S+  EDE
Sbjct:  124 EGESSKKPSLHNVSSRLPLILPEKV---QRSKALIECEGDSIDLSGDVGAVGRVIISKNASGNDEMLLDLKGTIYKSRIVPSTTFCIVSFGQTEAKIESIMTDYVQLTPHSNVFEAE--TMIEGTLDGFSFGSEDE 254          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI000B7832D6 (DNA-binding protein BIN4-like isoform X1 n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B7832D6)

HSP 1 Score: 72.4 bits (176), Expect = 1.120e-10
Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +PL++P  V   +++  LV    E+++ SGD GA+GRV +    +K S +  DLKG  +   I+PS T  VV IG++EAK+E + ++  +L  + NV DA    +++G ++  + F+ +D
Sbjct:  226 LPLILPDKV---HRSKALVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVIVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 339          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A803L260_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803L260_CHEQI)

HSP 1 Score: 72.4 bits (176), Expect = 1.150e-10
Identity = 41/120 (34.17%), Postives = 72/120 (60.00%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +PL++P  V   +++  LV    E+++ SGD GA+GRV +    +K S +  DLKG  +   I+PS T  VV IG++EAK+E + ++  +L  + NV DA    +++G ++  + F+ +D
Sbjct:  234 LPLILPDKV---HRSKALVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVIVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 347          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: UPI0009F540D9 (DNA-binding protein BIN4 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI0009F540D9)

HSP 1 Score: 71.2 bits (173), Expect = 1.360e-10
Identity = 38/123 (30.89%), Postives = 69/123 (56.10%), Query Frame = 0
Query:  104 LDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +  +PL+ P  V    ++  LV    E+++ SGD GA+GR+ V    +  + L  DLKG  +   I+PS T  +V +G++EAK+E + ++  RL  + N+ +A    +++G +D    + DE+
Sbjct:  104 VSRLPLVFPEKV---QRSKALVECDGESIDLSGDVGAVGRIIVSKGSSGNNELFLDLKGTIYKSTIVPSRTFCIVSVGQSEAKIEAIMNDFVRLEPQSNMFEAE--TLIEGTLDGFSFYSDEE 221          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A8B7CL13_PHODC (DNA-binding protein BIN4-like isoform X1 n=2 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CL13_PHODC)

HSP 1 Score: 71.2 bits (173), Expect = 1.440e-10
Identity = 36/120 (30.00%), Postives = 69/120 (57.50%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +PL+ P  V    ++ +LV    ++++ SGD GA+GR+ +         +  DLKG  +   I+PS T  +VG+G++EAK+E + ++  +L  + NV +A    +++G +D  + F+ E+
Sbjct:  115 LPLVFPDKV---QRSKVLVECDGDSIDLSGDVGAVGRIVISNASAGNQEMLLDLKGTLYKSTIVPSRTFCIVGVGQSEAKIEAIMNDFIQLEPQSNVFEAE--TMIEGTLDG-FSFDSEE 228          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A2R6Q9E3_ACTCC (DNA-binding protein n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6Q9E3_ACTCC)

HSP 1 Score: 71.2 bits (173), Expect = 2.470e-10
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 0
Query:   83 DKRGRDGGREGPQTKRAK--IE---QLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            DK+G DG  E  + + A+  IE       +PL++   V   N++  LV    E+++ SGD GA+GRV V    +    + FDLKG  +   I+PS T  VV  G++EAK+E + ++  +L  + NV +A    +++G +D  + F+ ED
Sbjct:  163 DKKGNDGDVEVAKEEIAEKHIEPHFSSSRLPLVLSEKV---NRSKALVECEGESIDLSGDVGAVGRVVVSDNPSGNQEVFFDLKGTIYKTTIVPSRTFCVVSFGQSEAKIEAIMNDFIQLTPQSNVYEAE--TMVEGTLDG-FLFDSED 305          
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Match: A0A803MJR7_CHEQI (Uncharacterized protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MJR7_CHEQI)

HSP 1 Score: 70.5 bits (171), Expect = 3.130e-10
Identity = 39/120 (32.50%), Postives = 72/120 (60.00%), Query Frame = 0
Query:  107 VPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKKTKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYKGNVLDAMGGQVLKGEMDASYKFEDED 226
            +PL++P  V   +++  +V    E+++ SGD GA+GRV +    +K S +  DLKG  +   ++PS T  VV IG++EAK+E + ++  +L  + NV DA    +++G ++  + F+ +D
Sbjct:  137 LPLILPDKV---HRSKAVVECEGESIDLSGDMGAVGRVIISETPSKESEMFLDLKGTIYKTVLVPSRTFCVVSIGQSEAKIEAIMNDFIQLKPQSNVYDAE--TMVEGTLEG-FNFDSDD 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5245.12615.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LI36_ECTSI1.540e-6683.97Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7C9A2T6_OPUST1.160e-1235.00Uncharacterized protein (Fragment) n=1 Tax=Opuntia... [more]
UPI001FB190C54.130e-1130.65DNA-binding protein BIN4 isoform X1 n=3 Tax=Impati... [more]
A0A0K9NS44_ZOSMR5.340e-1130.15Uncharacterized protein n=1 Tax=Zostera marina Tax... [more]
UPI000B7832D61.120e-1034.17DNA-binding protein BIN4-like isoform X1 n=3 Tax=C... [more]
A0A803L260_CHEQI1.150e-1034.17Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]
UPI0009F540D91.360e-1030.89DNA-binding protein BIN4 n=1 Tax=Dendrobium catena... [more]
A0A8B7CL13_PHODC1.440e-1030.00DNA-binding protein BIN4-like isoform X1 n=2 Tax=P... [more]
A0A2R6Q9E3_ACTCC2.470e-1033.56DNA-binding protein n=2 Tax=Actinidia TaxID=3624 R... [more]
A0A803MJR7_CHEQI3.130e-1032.50Uncharacterized protein n=1 Tax=Chenopodium quinoa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033246DNA-binding protein BIN4PANTHERPTHR34810FAMILY NOT NAMEDcoord: 9..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5245contigH-paniculata_contig5245:486..11783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5245.12615.1mRNA_H-paniculata_contig5245.12615.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5245 486..11903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5245.12615.1 ID=prot_H-paniculata_contig5245.12615.1|Name=mRNA_H-paniculata_contig5245.12615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MKGSKKRSTPEESKDSDGESMVDSDYAGSNAGDDDTILMSQTSLVSASQN
TLLSQESISQSQPEPGADEDGKGSGGSPMGVGDKRGRDGGREGPQTKRAK
IEQLDEVPLLVPATVCKDNKASLLVHLRDETLNFSGDTGAIGRVAVHGKK
TKGSRLTFDLKGQQFDGQIIPSATVLVVGIGRTEAKVEGLFSEVCRLGYK
GNVLDAMGGQVLKGEMDASYKFEDEDVNARGGGTGPGGEVTDEGEEAGRK
GKGGSSSAKTPKSVGRKKGSSGAKGGGKSSSAKKGGKASSSSSGKGKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033246BIN4