mRNA_H-paniculata_contig5235.12599.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5235.12599.1
Unique NamemRNA_H-paniculata_contig5235.12599.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 5.640e-153
Identity = 291/480 (60.62%), Postives = 343/480 (71.46%), Query Frame = 1 
Query:    1 DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEARGADSVMYAEARVVAEEFLSLYETHVLKPLAELA--ITTTTAPSVPRTHSYASTFEA------NDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPAAKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIREQEARDANRG--GASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLGTDRDRRRYWLLARGEDHRLFIELGGEWGVYSRVSQLKALHRWLDRRGTRERVLKAAVREHLISNLGVSATELDPPDR------RSRMDRDRMDYGSDE------EDQQDDEQQYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHRLLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMPVGAGNPGK 1374
            DLGTIL+RAE+GWYDLE  AE P+ SNSFGAGHAGVA DV+L+QQGWLEA+GADS ++ +AR V +EFL+LYETHVL PL EL   I  + A             E       +D D E          A   A    DP  M+ QMGS EY RWSPAA+SRALAWLCDEALSAAT+NDLV++V EA+E VDR+DRE+K AVRQR+R+QEA +A RG     +RR TE +MI AR+  ES D+KT R+LG+VKVRLKPLG DRDRRRYWL A GEDHRLF+E    WG Y+RVSQLKALH+WLDRRG RER LKAA+REHLI+NLGVSA EL+P  R      R R D D +  G +E           D QQY+GEPAEVAREKERER AG  AL +CGF AEEQR AL+RLC +F+VD   L+ +GLAF+ +T G+VMRD+AVHMGPNGLGLQL++  GGVVV G T MP G  NPG+
Sbjct:  871 DLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSDTDSE---------GARRGATGCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQEATEA-RGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQ 1340
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BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 1.930e-132
Identity = 267/481 (55.51%), Postives = 326/481 (67.78%), Query Frame = 1 
Query:    1 DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEARGADSVMYAEARVVAEEFLSLYETHVLKPLAELA--ITTTTAPSVPRTHSYASTFEANDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPAAKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIREQEARDANRG--GASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLGTDRDRRRYWLLARGEDHRLFIELGGEWGV--YSRV-----SQLKALHRWLDRRGTRERVLKAAVREHLISNLGVSATELDPPDR------RSRMDRDRMDYGSDE------EDQQDDEQQYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHRLLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMPVGAGNPGK 1374
            DLGTIL+RAE+GWYDLE  AE P+ SNSFGAGHAGVA DV+L+QQGWLEA+GADS ++ +AR V +EFL+LYETHVL PL EL   I  +TA +                D +  D +  +   +       DP  M+ QMGS EY RWSPAA+SRALAWLCDEALSAAT+NDLV+KV EA+E VDR+DRE+K AVRQR+R+QEA +A RG     +RR TE +MI AR+  ES D+KT R+LG+VKVRLKPLG DRDRRRYWL A GE     +  G  W    +  V     S  ++   W           +AA+REHLI+NLGVSA EL+P  R      R R D DR   G +E      E +++D QQY+GEPAEVAREKERER AG  AL +CGF AEEQR AL+RLC +F+VD   L+ +GLAF+ +T G+VMRD+AVHMGPNGLGLQL++  GGVVV G T MP G  NPG+
Sbjct: 1332 DLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSDTDSEDARRGAAGCN-------DPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEA-RGFHNPHNRRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEA----LTTGYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQ 1800
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6R7_ECTSI5.640e-15360.63Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L351_9PHAE1.930e-13255.51DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5235contigH-paniculata_contig5235:1183..10495 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score498.8
Seed ortholog evalue2.7e-138
Seed eggNOG ortholog2880.D7G6R7
KEGG koko:K03125
KEGG Pathwayko03022,map03022
Hectar predicted targeting categoryother localisation
EggNOG free text desc.negative regulation of protein autoubiquitination
EggNOG OGsCOG5179@1,KOG0008@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01001,ko03021,ko03036
Exons9
Model size1375
Cds size1374
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930521.5308344-CDS-H-paniculata_contig5235:1183..13791622930521.5308344-CDS-H-paniculata_contig5235:1183..1379Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 1184..1379 -
1691481329.9444563-CDS-H-paniculata_contig5235:1183..13791691481329.9444563-CDS-H-paniculata_contig5235:1183..1379Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 1184..1379 -
1622930521.5503047-CDS-H-paniculata_contig5235:2449..25741622930521.5503047-CDS-H-paniculata_contig5235:2449..2574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 2450..2574 -
1691481329.9685748-CDS-H-paniculata_contig5235:2449..25741691481329.9685748-CDS-H-paniculata_contig5235:2449..2574Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 2450..2574 -
1622930521.5702264-CDS-H-paniculata_contig5235:3242..33831622930521.5702264-CDS-H-paniculata_contig5235:3242..3383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 3243..3383 -
1691481329.977652-CDS-H-paniculata_contig5235:3242..33831691481329.977652-CDS-H-paniculata_contig5235:3242..3383Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 3243..3383 -
1622930521.581849-CDS-H-paniculata_contig5235:3652..37691622930521.581849-CDS-H-paniculata_contig5235:3652..3769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 3653..3769 -
1691481329.9860976-CDS-H-paniculata_contig5235:3652..37691691481329.9860976-CDS-H-paniculata_contig5235:3652..3769Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 3653..3769 -
1622930521.5976102-CDS-H-paniculata_contig5235:5497..56691622930521.5976102-CDS-H-paniculata_contig5235:5497..5669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 5498..5669 -
1691481329.9950643-CDS-H-paniculata_contig5235:5497..56691691481329.9950643-CDS-H-paniculata_contig5235:5497..5669Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 5498..5669 -
1622930521.613538-CDS-H-paniculata_contig5235:5975..60311622930521.613538-CDS-H-paniculata_contig5235:5975..6031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 5976..6031 -
1691481330.005004-CDS-H-paniculata_contig5235:5975..60311691481330.005004-CDS-H-paniculata_contig5235:5975..6031Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 5976..6031 -
1622930521.6321084-CDS-H-paniculata_contig5235:6231..66181622930521.6321084-CDS-H-paniculata_contig5235:6231..6618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 6232..6618 -
1691481330.014979-CDS-H-paniculata_contig5235:6231..66181691481330.014979-CDS-H-paniculata_contig5235:6231..6618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 6232..6618 -
1622930521.6490355-CDS-H-paniculata_contig5235:7017..71341622930521.6490355-CDS-H-paniculata_contig5235:7017..7134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 7018..7134 -
1691481330.0238833-CDS-H-paniculata_contig5235:7017..71341691481330.0238833-CDS-H-paniculata_contig5235:7017..7134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 7018..7134 -
1622930521.6737876-CDS-H-paniculata_contig5235:10432..104951622930521.6737876-CDS-H-paniculata_contig5235:10432..10495Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 10433..10495 -
1691481330.0326765-CDS-H-paniculata_contig5235:10432..104951691481330.0326765-CDS-H-paniculata_contig5235:10432..10495Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5235 10433..10495 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5235.12599.1prot_H-paniculata_contig5235.12599.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5235 1184..10495 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5235.12599.1

>prot_H-paniculata_contig5235.12599.1 ID=prot_H-paniculata_contig5235.12599.1|Name=mRNA_H-paniculata_contig5235.12599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=458bp
DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEA
RGADSVMYAEARVVAEEFLSLYETHVLKPLAELAITTTTAPSVPRTHSYA
STFEANDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPA
AKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIRE
QEARDANRGGASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLG
TDRDRRRYWLLARGEDHRLFIELGGEWGVYSRVSQLKALHRWLDRRGTRE
RVLKAAVREHLISNLGVSATELDPPDRRSRMDRDRMDYGSDEEDQQDDEQ
QYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHR
LLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMP
VGAGNPGK
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mRNA from alignment at H-paniculata_contig5235:1183..10495-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5235.12599.1 ID=mRNA_H-paniculata_contig5235.12599.1|Name=mRNA_H-paniculata_contig5235.12599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9313bp|location=Sequence derived from alignment at H-paniculata_contig5235:1183..10495- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTCGGTACGATACTCAAGCGCGCGGAGAGTGGGTGGTATGACCTGGA
GGCCATCGCCGAGGTGAGAGTTTTTTTTTTTTTTTTCGTCGCGGATCAGT
TCTCCTATCGAAACTTGGGGTCCGAAGCCGAGAGTGAAGTGCCTCAGGTT
CTTGCCTTGGATTTTTCCCGCGGCAGGGGAAGCAGTCCCACTCGTTCGTC
AATGTAAGAGTTGGTGGCAGTGTTGTCGGAGAGTAGTGTTTTCCCTCTTG
CAATCAGTTTTTGCCGCGTACTAACAGTTTTTCCCGAGTGGGTGTATTAT
GGATGGAAGCATGGAGTATGACATTGTTGGAGCGATGACCCGGGGGTGGG
TAGCTAGCTTGTGATGTTCATCTGTGCTTGGTAGCTTAGGTCCAGGTGAT
ATTACTTGATTGTGAAGTGAGTTGGTCCATCCGCTTCCATAATATCATAT
TTCTTTTTCAAAGTCGGCACGTTGCACACGGGGGTAGTGGAGTTGCATAT
TACAGTGGTTTGATTGTGTGTGACGGCATAAGATTATCGCTTACTCAAGC
TCCGTTGGTCACAGAGTCGACAGACCTTCGACAGATGGCGACAATGTTGT
GCTCGAAGGTTTTCGGGACTTGATGTTTCCAGTGGGTATGCACTACACCT
GGGGTGATGAGGATTTTCAACATCGATATCATAGCATAAATAGCTGTACG
TTGCTAAGCTGGTAGCAGTCAAGAGGTTGAATTCGACCCCTTCGAAAGAT
TTGTTAGCCAAGGGGTGTCATAGAAGGCAGGGCTTGAACTACATCCCAAG
AAGTGCGATAAGGGCATTTTTTCGGCGGGGGTAATTTGGATGTCCTGTGT
TATTATCCACCATTTGACGGGAGACGTGTTGTTATCCAGTGGAGGAAAAA
AAAAGAAGCAACATCGTACTGAGCCTCAACGGCATATTTGGTGGGCTTAG
ATCCTGGAAGATCTTGGGAGAATCGTGTCGAAGGGGGATAACAGTAGTGC
GGCGTCGGCGGGAAAGTATAGCAGTAGCATCTCTAAGGGGCAGAGTATTT
TGCAGGGAGGATATTAGTGCCCAACGCAAATGCGGCCAAAATTTGGTCGA
CATCGCTACACTGGTGGACGGCGTGTGGCGATTTGTTTGTTGGTGATGCG
GAAGGGAGCTTGGCGGTATCACGAGGGGCGTATGAATAAGAACATATTAT
CATTTGCAGCAGAACACGCCATGCTGGACATCCTCCCTGCTATCCGGTTT
ACATTTTGATTATTTTCGATCAACGGGTCTGCGCAATCAAACGACTATTC
GTGTGAAGCAAGCACATCTGTCGGTCGGAATCTTATGTGAGATGGAACAT
ACAACGTCGGACAAGATGGTGCCGTACGTAACATTGATTGGATGCTCTGC
ACTATTGCATGTGATACAAATATGCGGTAGCACTTGCATAGCGTACAAAA
GGCATGCAGGTCACTTACACGGCCCGGCACAAACTGCTCGCACTGAAGTG
TGACAAGGGGCGAAAAAAATTAGAGAGAGGGTGATCCAAGCCCTGCCTTT
TTTGTGACCCCTTGTGTGAGCGCAGACGAATTGAGCGGATTTGAGACATG
CAGTAAAAAGCCACTGAAAGAGTTTTTGATCACATCTATAAACAGCTCTG
GGTTCGTCGGAGATCGATAGTTACGGTATGGTAAGCCGCTTATGACAGGC
GCTGCAGAGCGTACTTCACGGCACGAAACATGCAATATGTCAACAGCTAT
TCCGAACCCGACGTAGGTAAGGATAGTTTTTGGAAAGCTAGGCATTTCGA
AAGATTTTCATAGTGAGAGCGCGTCTCCCATCCTGTGTGCTGTTGTACCG
AAAATAGAAAAAATGTGCCATTTTTTCAAAATTCAAAATTTCTGGCGACC
GCTTCATGTGTCTTGCACAAGCAAACGGCGAAGCAAGTCATATCGCAGCA
AATTGCTACTACTTAGCGATGACCTGTATTACGAGAAGGACTCGTTGACT
GCCGTGGGCGGTAAGTTGCTGTCCTTGACGAAGCACAAGGGGAGAAACGG
GGCGTACCGTGTGCAGATAACTGCGAACCCAGCGGTTACACAAGAGGTGC
TGTGGACAAGAAAACCATCACGCCCCCAAAAGGGCATAAGTCAGACCGCA
ATCACGACGCGGAAGCAAAGTTGTTGAAAGCGTGGCTTCCAAAGGAGTGT
ACAGCGACCTCTATTGGCAGTCCTCAAGTGGTGTTAGGTAAGCAGAGGGA
ATTTGAGGAGGTCAAGGCTAGATTGGAGTTGCTCGTTGAGCGTTGCGAGG
GGAGTTCCCTCCAGCTTGTGTAGGCAAGGTCTAAGTGCTGGATGCGCCAA
TATTTCGGATACATTGTACACTCATTCTGGAACAAGGTGCTAGCAAGGTT
CTTGCCTCTACAACGGGAAGGGAGTAGGGGTAGAGTCCGTGCAGAAGTAC
TGCAGGAAGGGGTTCAATTACCCACGACTTGTACCGCCCAGACCTAACAG
AGCCTGACGCAGTGGTGGGGAGGAAAAAGTGCAGGTCGCACCGGCACAGC
GGGACTTTTCTATATCCAGGTGTTACGTTTTTAGAGTCGCTTCCCCCCCG
TACTGTAGGTCGTTGGTGTAATGTGCTGCACAAGGCGCGGGTTTGCTTTC
TCTGCGCTTCGTTGCCCAACCCTTTGTATTGTTTTGACCTATTAATATCC
ATGTATTTAAATGTGTTGTATCATGGGGTGTGGTGTTGAGAGCCTTGCAA
TGTGTTGCTACTTTGTTTCGGGTTTTGTTGATTGTTAGTGTCTGTTTTTG
TCCATGTTTTGGATGGGGGGGGGAATTTCGAGGTTCTGGGGAATAGTACT
CGCGGGTGTGGGCATGGAGTGTTGCGGTGTACGTTGAGGGCAAGCGCCGG
CAGAGGTAAGACTGATACGAAAAAAATGAATGTGAACGATGCTTCGTTCG
CAAGAAATTCAACTCTTTGTGTTTTCGGAACACGGAAACGCCTCTTGAAA
AAACTCGATGAAATTCAGTCTCTTGGATGATGATCTCCAAATTCGTGTCG
TTGGGAAAATTAACCTCGTCTTGATCCAAATGTATGTAATGATCGCGTGA
AGTCTTTCGAACTTGCAGGATTCGTTCCCTCGCCAAGAAAAATCAAGCGT
GAGAAACAATTTTCATCACCCGGGGTGCTGTATACTGTACACCACGGTAG
GGTTACGCATTGGATTGGTCATCCAATCATCCATTACCCATCCCATTCCA
TCCACTGTGTTAGCCCTCGTCGACCCCAGATTCTCGCTCGCACTCGGTCT
TACGCGCGTGTGTATGTGTCGTTATTCCCTTCTCATCCTCTTCGGCAACC
CTCCGATTCAGGCGCCGATTTCGTCCAACAGCTTTGGGGCAGGGCATGCC
GGAGTGGCGATGGATGTCCAGCTTCTCCAGCAGGGCTGGTTGGAAGCGCG
CGGCGCGGATAGCGTCATGTATGCAGAGGTGCGTTGGTTGCTTGCTTTGT
GTTGGAGACTGGCAGGTATGTCAGAACCTTGAAAATCACCAGTCAGTCGC
GCATGCGCTGACCGGACGGCGTGCGGTGTGCTTTCTTGTGTTTTATTTAG
AAATGGTATCTCTTCCCCTTCCTGCCCCACGCTATGTATATCCTTGGTGC
CTTTGCTATGGCCGCACGCCTCTCCATCACAATCCTTACACGTTACAGGG
GACCGAATCCAACGCACCCAAGAATGATGCCTCAAACAGATATTGGAGGA
GTTATGCCACCAATGCCTCGTGCACACATCCTGCCAATGACGAAACAACC
TCCCCCCCCCCTCCCCCGGCCGCCCCTGTCGCCCGCCGTCGCCTCCAACA
TATTCGAATCAAACCGGAATGGAGCAGGCTCGAGTAGTGGCTGAAGAGTT
CCTGTCCCTCTACGAGACCCATGTCCTCAAGCCGCTGGCGGAGCTTGCTA
TCACGACCACTACGGCGCCGTCGGTACCTCGCACCCATTCCTACGCCTCG
ACCTTCGAGGCCAACGACCACGACGACGAGTGCAGGGATCGGCAGCCGGT
ATCGACAGCAGCGTCGACCGCCGCTGATTTTGCCGCGGACCCTTTCGCGA
TGCTGAGTCAGATGGGCTCGGCGGAGTACGCGAGGTGGTCGCCGGCGGCC
AAGAGCCGTGCGCTAGCGTGGCTGTGCGATGAGGCGCTGTCTGCGGCCAC
CATCAACGATTTGGTCAGGAAGGTGTTGGAGGCACGAGAGACGGTCGACA
GGAGAGACCGAGAGGTGGGTGGGATTTGCGGGTTCAATGCTGGCAATATT
GAGTGGCGTGGCCTCGTGTAAGGCACTGTAATTCTCATACTCTAGGGTAC
ATGACATCATGTTGTACTATGTCATCCCGCATGGTGATTTTTCTTCTTAT
TCAAATGTTCATCCCCCATTTTTCGCCTTGCTTTTTATTATATATATATA
TTTGTTGTGATCAGCTGAAGACAGCGGTTCGACAACGGATTAGAGAGCAG
GAGGCCCGAGACGCCAACCGGTGAGATGTAGAAATTTTTGTGCAGAGTTA
GCATGCTATCCATCCGCAAAATCGTTCTCAATTCTAGCAACAAGGCGGTT
ACGGCGACGCTAATTTCGCAACATTTTTCAGTATAATATCTATTATGTGG
TGCGGATGTTATGATCTATTATTGTTGTTGTGCTTTTGTGCTTTTGTGAT
TTTTTGCCTTGTGCGGAGTGTTGTCCACCTGTCATCCATCCACTGATCGA
TTGATTGATTTATTCATTCATTCGTTCGTTCACCCGTGTTATCGATGCAA
TTCATTCTGTTCGCGCGCACAATCAGGGGTGGCGCATCAAGCCGTCGAGT
GACGGAAGTGGACATGATCAACGCTAGGATAGAGGCTGAGAGCTCGGACA
TGAAGACAAGTCGCCAGCTAGGGAATGTCAAGGTCCGCCTCAAGCCGCTG
GGTACCGACCGTGACCGACGGAGGTACTGGCTGCTCGCGAGAGGAGAGGT
AAGCAACAAACAAAAATCATGGCAAGGGAGTCATCTTGGTGCATCTTGGT
CATCTTGGTGCATGCTTATCATGCATCTTAACCGGTGAGACAACCGACGA
CTCGCCCCCTCCCCGCAGGGTTCGCCACCCACCTATTTCAACAATGATGT
CGAGATCATTGTATCCAAGAAGTGGGCGCGGGCTCAAGATGGATTTTTGT
TGTTGTACTATCGTTGTTGTAGTGTTACTCCTTGCTTTCTTGTGAATGGC
AAGTTTGGTCGTAGAGTGGGAGTGAGAGAGGTGGAGGCGAGTGTGTACTC
GCGAGCCCTCTCTCGTCCCTCCCTTGGAGAACGTCCCTTCAGACCGTTAC
TCCACTCGTAGAGCGATCTTGGGAACGACCCTTCTACAAATCCTTCTTGA
TTATTCTAGAATATTCCAGAACCTTTTAGACTATTGTTTCGAAATTCTAC
AAGGTGGAGTTCTTTCTTCGTATGAAACGCGCATGTAAATAATTATTTAC
TACTCTGTACTACTGTATCATAGTATTCAGCTCTAGAATACGTGCATAGC
ATACGCACTATCAACAATCCACACACAGACTTGTGACACATATACACGGG
CTTCACCACTCAGCCTCAACCCAATACTATGAAATCACTATGGGTCTACT
GGGAACGGTGCAACACGCTTTGGTAGGCCGCTTGCCCAGCTACGCCAACC
GGCGATGGGTGTCCAGCGTGCAGTGGCATAGTTGTTGGTATCATTTTTTG
AAGTGCCCTCGTGGAGCTGTTTGTATCATTGTATCATGAACATGCCGATG
TCTGTAATAGTACTATTAACAGTCATGGCCCGTGAAAGCCACGGAGTAAT
ATCTTGGTGAAGGCTTGTTGTGATTCTGCATGTATGTAAAGAATACGATA
GCATAGTTTCGCCCCCCGGACAAATACAAATGCTTGCAATGGTTTCCACA
AAAAACTGAAAATATTCGCTTGAGTTTCAGAATAAGCTCATGTGTTCGAT
TTTCCCCGGACCATCATCCACGACTGCTAATACTACTCGTAAGTCGAATG
AACAGGGATGGGTACTTTTTTCTATGTGTCCGCTCATTCTGAAACTCAAT
CGATTACTTGAATTTTTTTGTGAAAATTATTTGCAATTGTTCGTATCTGT
CCGCAGGGTTCATAGTTTACAGACGACGGTGTCGAACACCTCCCGGGGAT
GAAGCGTTTTTGATGGTTCTGTTTCTCGAGAATCAGGATACGGCCTGTCT
AATGGCACTGCTGAAAGAGCACGTCTATCTAATGACACATTTCTCTCGAC
GATATCGATGTACGTCTGTCCAATAACGCAAGTGTTTCGCCTGGATCGTC
TGTGCAAGCGGGCGTGTCGTGTTGGTGATCCGCAGCTTGTTTACCCACGC
CCCATTGCGTATTGTTTGTTGTTTGTTGTTACTTGAATGATTCGACAATG
TGCTCTCGTGGTAGTTTCGTGTACTCTAATTTCAAGTGTTAAACTGTCCA
ATCAATGGAACCGCTTCTTGGCATGTTACTCAACTGTAGAGCCTGTCAAC
ATACGTTAGCTTGCAGATTGACCCACGCTAACTCATACGCCACTTGTTGT
AGACACAAGCATATGAATGATCAAGGATAGCACTAGCACTATACGGCCAC
ATGCATAGTCATGGGGTATGTTTGCAATAATTAGGCTCTTGCGTTGACTG
TTACGAGCGCAATCATGACATGGCAGGACCATCGGTTATTCATCGAGCTG
GGGGGGGAATGGGGCGTCTACTCGAGGGTTTCTCAGCTGAAGGCGTTACA
TCGCTGGCTGGATCGTCGGGGCACGCGAGAGCGTGTTCTCAAGGTAAATA
TGTAAGAGTACCTGTGTACTTGAGATACTGGATGTATCGATACTGTCCAT
ATGAAGTGAGATATTGCGCAGTCTACGTTGGCGTGATACAGCCAACCCAA
GCATGTAGCTGTGCAGCAAACAGCCTAGCTAAATAAAACAAATGAGTAGA
GCTCTGAGTGAGAAGCCTAGTGGACTAGACCACCATCTCTGAGAATTATG
ATTGAGCCACGGTGGCGTCCATGTTGACGCCGGATTCCGTTTGGGGTTTA
TTTCAATTGTAGGCGGCGGTCCGGGAGCATCTGATTAGCAACTTGGGAGT
AAGCGCGACGGAGTTGGATCCGCCAGACAGACGTTCTAGGATGGATCGAG
ATCGAATGGATTATGGAAGTGATGAAGAGGACCAGCAGGACGACGAACAG
CAGGTTTGACGACAGCCGTAACTGTTTTTTTTTTTTTTTTTCGTTTTTTT
CTTTCTTTTTTAAAATGTCTCTTTAATACTTTAATTAACCAAGCATTGTT
GCTCATGTATCACTCTACAATCCGAGCGCTCACGTCAAAATGGCGATATA
ACCAGAACCACACAAGTTTTTCGTTGAATATTGGCGAGAGGGGAATCTCA
TTATACCCATGCCAAAGAGTACAAAAGGATTAGTTGCGCCGACATTCTGT
ATCTCAATCTGTTTATTGCGATTCTCGCCGTGTGAAACTATAGTTCCTGC
GTGTTTTTTATACGTTCATGTCGCGCTCTTAAACTATATTTTTTCGAGAC
AACAAAAAGGCTCTCCCAATCGTTATTGGGCTGGAAGGTGTAGGTGTTGT
ACACAGGGAGTCAGGGCTTCCCCTCCACAGGAACATCAGCAACTTCAAGA
AGGTTCTTTCCACAGCTTGTCGCTTCGTGAACCCCGTGACTGTTCTTGAA
GGGAAGGAGTGTCATAATCCGTTTGTATCTTTACTATACTGCCAGGTATT
CTATCAACAATGATTGCCTTTTCTTGTCTATATTATAATGATACATGTAG
TTCATAGCTCGTTCTTTACGGTTACAAGCGAAGTGACTGAAATGTGCTTG
GCTATTTCTTCATTCGCGCAGTACGTCGGAGAGCCGGCCGAGGTGGCTCG
AGAGAAGGAGCGTGAACGCCATGCCGGGAGGGAGGCGCTCAAGGCCTGCG
GCTTCATGGCCGAAGAGCAGCGCTACGCACTGCAACGACTGTGCCCGTGA
GAGATAGCACTTCTTTGGGATGCGTTTGTTGGTTTCCTGATGATGAGTGC
ATGTATTATGAATACTACATCGTTTTCGATGGCCGTTAGGTGTTGAATTC
GAGGCCGTCTAGTGATTATTTACTGTTGGACGCAACGCGTGTGTTTGTCT
TCCGATGGTGATTGTTGTATCCATGATGCGTATCAGGTAATGTTATGTTG
TGTTCTTGATACGCATCATGAAGAACTGCTTGAGTCAAGCAACAAAATTC
CAATCTAAGCACAATGGGAAATACAAGTGTTTGCTTACGGAGTAAAAGCC
TAGGTAAAAGCCTAGGTAGGCTTTTTCTCCATCGTCCCCGTTGTCGACAG
CAAAATGTAACCCCTAGTAAGTGCATAATGCACTGTAGTTGACGTTCTCC
AATGATGAACGTCTGCAGAGGTGAACAACTTTATTAACGTGATTTTCTCG
AAAACTGCTAGTCTATGCCTTACTGCTAGTCTACGCCTTACAATACAAGA
GGTGAAACTAGAAGAGGAAAAACGTGGTAAGGTCATTCATCTCACCTCAT
CTCATCTCGTTTCATTTCGAGTCGTTCATTGATCGATCGGCGGGGGGGGT
TCAAATAGTCAAGATGTCAAGGTGTTGTACAAGGTGATGAAACCAACACA
TAATCGACGGGAAATGTTCTGCAGGAGGCGTCTCTCATATCATTTTGGGA
TGGGTAATACCGTAGAGTGCTCTGAGAACGCCCCGGGGCGAGAAAATGTT
TCAAAACCTGATCTCGCCTTGACTTTGCTCCGATAAAAAATATCTGTCTA
TCTATCTCGCCGATATAAAGATCGATCGATTCGTCGATCGACCTGCTTTT
ACGAACGCACATGGACTTGCTTTCCTGTCGAGAAAATCGAGTTTGAGAAA
AAATCGCCCCTCGGGCATCCTAAGAGCTCTCCACGGCAAGTGAGATGGAT
TATTGATTGTGTCAACCATCCGCCCTTCCCACTCTCCAACCTCCCGACCT
CCATCCTTATACCTATGCTTATACTTCCTGGTCCTTTATAACGACCCTGC
TTTTGTTGACACGCAGCACGTTCTCGGTAGACCACCGGCTCCTGCAGGAA
TCGGGGCTGGCGTTCGACCCGAGGACGGGCGGGTTCGTGATGCGAGATAT
TGCCGTGCACATGGGACCCAACGGGCTGGGCCTCCAACTGAATATGTTAA
GGGGGGGGGTGGTTGTATGCGGTCATACTCCTATGCCAGTGGGTGCTGGA
AACCCGGGGAAGG
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Coding sequence (CDS) from alignment at H-paniculata_contig5235:1183..10495-

>mRNA_H-paniculata_contig5235.12599.1 ID=mRNA_H-paniculata_contig5235.12599.1|Name=mRNA_H-paniculata_contig5235.12599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2748bp|location=Sequence derived from alignment at H-paniculata_contig5235:1183..10495- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCTCGGTACGATACTCAAGCGCGCGGAGAGTGGGTGGTATGACCTGGA
GGCCATCGCCGAGGACCTCGGTACGATACTCAAGCGCGCGGAGAGTGGGT
GGTATGACCTGGAGGCCATCGCCGAGGCGCCGATTTCGTCCAACAGCTTT
GGGGCAGGGCATGCCGGAGTGGCGATGGATGTCCAGCTTCTCCAGCAGGG
CTGGTTGGAAGCGCGCGGCGCGGATAGCGTCATGTATGCAGAGGCGCCGA
TTTCGTCCAACAGCTTTGGGGCAGGGCATGCCGGAGTGGCGATGGATGTC
CAGCTTCTCCAGCAGGGCTGGTTGGAAGCGCGCGGCGCGGATAGCGTCAT
GTATGCAGAGGCTCGAGTAGTGGCTGAAGAGTTCCTGTCCCTCTACGAGA
CCCATGTCCTCAAGCCGCTGGCGGAGCTTGCTATCACGACCACTACGGCG
CCGTCGGTACCTCGCACCCATTCCTACGCCTCGACCTTCGAGGCCAACGA
CCACGACGACGAGTGCAGGGATCGGCAGCCGGTATCGACAGCAGCGTCGA
CCGCCGCTGATTTTGCCGCGGACCCTTTCGCGATGCTGAGTCAGATGGGC
TCGGCGGAGTACGCGAGGTGGTCGCCGGCGGCCAAGAGCCGTGCGCTAGC
GTGGCTGTGCGATGAGGCGCTGTCTGCGGCCACCATCAACGATTTGGTCA
GGAAGGTGTTGGAGGCACGAGAGACGGTCGACAGGAGAGACCGAGAGGCT
CGAGTAGTGGCTGAAGAGTTCCTGTCCCTCTACGAGACCCATGTCCTCAA
GCCGCTGGCGGAGCTTGCTATCACGACCACTACGGCGCCGTCGGTACCTC
GCACCCATTCCTACGCCTCGACCTTCGAGGCCAACGACCACGACGACGAG
TGCAGGGATCGGCAGCCGGTATCGACAGCAGCGTCGACCGCCGCTGATTT
TGCCGCGGACCCTTTCGCGATGCTGAGTCAGATGGGCTCGGCGGAGTACG
CGAGGTGGTCGCCGGCGGCCAAGAGCCGTGCGCTAGCGTGGCTGTGCGAT
GAGGCGCTGTCTGCGGCCACCATCAACGATTTGGTCAGGAAGGTGTTGGA
GGCACGAGAGACGGTCGACAGGAGAGACCGAGAGCTGAAGACAGCGGTTC
GACAACGGATTAGAGAGCAGGAGGCCCGAGACGCCAACCGCTGAAGACAG
CGGTTCGACAACGGATTAGAGAGCAGGAGGCCCGAGACGCCAACCGGGGT
GGCGCATCAAGCCGTCGAGTGACGGAAGTGGACATGATCAACGCTAGGAT
AGAGGCTGAGAGCTCGGACATGAAGACAAGTCGCCAGCTAGGGAATGTCA
AGGTCCGCCTCAAGCCGCTGGGTACCGACCGTGACCGACGGAGGTACTGG
CTGCTCGCGAGAGGAGAGGGGTGGCGCATCAAGCCGTCGAGTGACGGAAG
TGGACATGATCAACGCTAGGATAGAGGCTGAGAGCTCGGACATGAAGACA
AGTCGCCAGCTAGGGAATGTCAAGGTCCGCCTCAAGCCGCTGGGTACCGA
CCGTGACCGACGGAGGTACTGGCTGCTCGCGAGAGGAGAGGACCATCGGT
TATTCATCGAGCTGGGGGGGGAATGGGGCGTCTACTCGAGGGTTTCTCAG
CTGAAGGCGTTACATCGCTGGCTGGATCGTCGGGGCACGCGAGAGCGTGT
TCTCAAGGACCATCGGTTATTCATCGAGCTGGGGGGGGAATGGGGCGTCT
ACTCGAGGGTTTCTCAGCTGAAGGCGTTACATCGCTGGCTGGATCGTCGG
GGCACGCGAGAGCGTGTTCTCAAGGCGGCGGTCCGGGAGCATCTGATTAG
CAACTTGGGAGTAAGCGCGACGGAGTTGGATCCGCCAGACAGACGTTCTA
GGATGGATCGAGATCGAATGGATTATGGAAGTGATGAAGAGGACCAGCAG
GACGACGAACAGCAGGCGGCGGTCCGGGAGCATCTGATTAGCAACTTGGG
AGTAAGCGCGACGGAGTTGGATCCGCCAGACAGACGTTCTAGGATGGATC
GAGATCGAATGGATTATGGAAGTGATGAAGAGGACCAGCAGGACGACGAA
CAGCAGTACGTCGGAGAGCCGGCCGAGGTGGCTCGAGAGAAGGAGCGTGA
ACGCCATGCCGGGAGGGAGGCGCTCAAGGCCTGCGGCTTCATGGCCGAAG
AGCAGCGCTACGCACTGCAACGACTGTGCCCTACGTCGGAGAGCCGGCCG
AGGTGGCTCGAGAGAAGGAGCGTGAACGCCATGCCGGGAGGGAGGCGCTC
AAGGCCTGCGGCTTCATGGCCGAAGAGCAGCGCTACGCACTGCAACGACT
GTGCCCCACGTTCTCGGTAGACCACCGGCTCCTGCAGGAATCGGGGCTGG
CGTTCGACCCGAGGACGGGCGGGTTCGTGATGCGAGATATTGCCGTGCAC
ATGGGACCCAACGGGCTGGGCCTCCAACTGAATATGTTAAGGGGGGGGGT
GGTTGTATGCGGTCATACTCCTATGCCAGTGGGTGCTGGAAACCCGGGGA
AGCACGTTCTCGGTAGACCACCGGCTCCTGCAGGAATCGGGGCTGGCGTT
CGACCCGAGGACGGGCGGGTTCGTGATGCGAGATATTGCCGTGCACATGG
GACCCAACGGGCTGGGCCTCCAACTGAATATGTTAAGGGGGGGGGTGGTT
GTATGCGGTCATACTCCTATGCCAGTGGGTGCTGGAAACCCGGGGAAG
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