prot_H-paniculata_contig5235.12599.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5235.12599.1
Unique Nameprot_H-paniculata_contig5235.12599.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length458
Homology
BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 5.640e-153
Identity = 291/480 (60.62%), Postives = 343/480 (71.46%), Query Frame = 0
Query:    1 DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEARGADSVMYAEARVVAEEFLSLYETHVLKPLAELA--ITTTTAPSVPRTHSYASTFEA------NDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPAAKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIREQEARDANRG--GASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLGTDRDRRRYWLLARGEDHRLFIELGGEWGVYSRVSQLKALHRWLDRRGTRERVLKAAVREHLISNLGVSATELDPPDR------RSRMDRDRMDYGSDE------EDQQDDEQQYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHRLLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMPVGAGNPGK 458
            DLGTIL+RAE+GWYDLE  AE P+ SNSFGAGHAGVA DV+L+QQGWLEA+GADS ++ +AR V +EFL+LYETHVL PL EL   I  + A             E       +D D E          A   A    DP  M+ QMGS EY RWSPAA+SRALAWLCDEALSAAT+NDLV++V EA+E VDR+DRE+K AVRQR+R+QEA +A RG     +RR TE +MI AR+  ES D+KT R+LG+VKVRLKPLG DRDRRRYWL A GEDHRLF+E    WG Y+RVSQLKALH+WLDRRG RER LKAA+REHLI+NLGVSA EL+P  R      R R D D +  G +E           D QQY+GEPAEVAREKERER AG  AL +CGF AEEQR AL+RLC +F+VD   L+ +GLAF+ +T G+VMRD+AVHMGPNGLGLQL++  GGVVV G T MP G  NPG+
Sbjct:  871 DLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSDTDSE---------GARRGATGCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQEATEA-RGFHNPHNRRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQ 1340          
BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 1.930e-132
Identity = 267/481 (55.51%), Postives = 326/481 (67.78%), Query Frame = 0
Query:    1 DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEARGADSVMYAEARVVAEEFLSLYETHVLKPLAELA--ITTTTAPSVPRTHSYASTFEANDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPAAKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIREQEARDANRG--GASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLGTDRDRRRYWLLARGEDHRLFIELGGEWGV--YSRV-----SQLKALHRWLDRRGTRERVLKAAVREHLISNLGVSATELDPPDR------RSRMDRDRMDYGSDE------EDQQDDEQQYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHRLLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMPVGAGNPGK 458
            DLGTIL+RAE+GWYDLE  AE P+ SNSFGAGHAGVA DV+L+QQGWLEA+GADS ++ +AR V +EFL+LYETHVL PL EL   I  +TA +                D +  D +  +   +       DP  M+ QMGS EY RWSPAA+SRALAWLCDEALSAAT+NDLV+KV EA+E VDR+DRE+K AVRQR+R+QEA +A RG     +RR TE +MI AR+  ES D+KT R+LG+VKVRLKPLG DRDRRRYWL A GE     +  G  W    +  V     S  ++   W           +AA+REHLI+NLGVSA EL+P  R      R R D DR   G +E      E +++D QQY+GEPAEVAREKERER AG  AL +CGF AEEQR AL+RLC +F+VD   L+ +GLAF+ +T G+VMRD+AVHMGPNGLGLQL++  GGVVV G T MP G  NPG+
Sbjct: 1332 DLGTILRRAENGWYDLEPGAEPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSDTDSEDARRGAAGCN-------DPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQEATEA-RGFHNPHNRRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEA----LTTGYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVDLHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQ 1800          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5235.12599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6R7_ECTSI5.640e-15360.63Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L351_9PHAE1.930e-13255.51DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028941WHIM2 domainPFAMPF15613WSDcoord: 244..309
e-value: 2.4E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR15546FAMILY NOT NAMEDcoord: 228..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5235contigH-paniculata_contig5235:1184..10495 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5235.12599.1mRNA_H-paniculata_contig5235.12599.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5235 1183..10495 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5235.12599.1 ID=prot_H-paniculata_contig5235.12599.1|Name=mRNA_H-paniculata_contig5235.12599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=458bp
DLGTILKRAESGWYDLEAIAEAPISSNSFGAGHAGVAMDVQLLQQGWLEA
RGADSVMYAEARVVAEEFLSLYETHVLKPLAELAITTTTAPSVPRTHSYA
STFEANDHDDECRDRQPVSTAASTAADFAADPFAMLSQMGSAEYARWSPA
AKSRALAWLCDEALSAATINDLVRKVLEARETVDRRDRELKTAVRQRIRE
QEARDANRGGASSRRVTEVDMINARIEAESSDMKTSRQLGNVKVRLKPLG
TDRDRRRYWLLARGEDHRLFIELGGEWGVYSRVSQLKALHRWLDRRGTRE
RVLKAAVREHLISNLGVSATELDPPDRRSRMDRDRMDYGSDEEDQQDDEQ
QYVGEPAEVAREKERERHAGREALKACGFMAEEQRYALQRLCPTFSVDHR
LLQESGLAFDPRTGGFVMRDIAVHMGPNGLGLQLNMLRGGVVVCGHTPMP
VGAGNPGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028941WHIM2_dom