mRNA_H-paniculata_contig5231.12598.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig5231.12598.1
Unique Name	mRNA_H-paniculata_contig5231.12598.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI)

HSP 1 Score: 942 bits (2434), Expect = 0.000e+0
Identity = 600/1243 (48.27%), Postives = 733/1243 (58.97%), Query Frame = 2

Query:    2 CQDQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTD-QAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVHPPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDRLSCGQMLLAAVRTLASHKILALATDLEEIAQQLRMDNDKSNPSVSVVNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGAQQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQRWQALLGRADNTALSDSGLDLSVQDGFGTLRSFVCLAQFREEGVKLSDEWRRRRVNGRLRRRGPGVIELTTAERAATPGRVPLTAPDGTILSQGVVDPLSVALGLSTDWHQGDEGLPG-LVASLAEMSDTED--VDASTSFIRAKGGSRDSPGEK---DGNVLPACDVLEDTGEEIYFFLEVAVTASMKVKHMLIVASLSTAAGACPSRRPKVNETYHIRPSSLQQSSYGSYGSLEIALLPAETVVGTGLIERASLLGKRSASDLRASDSKRRNGTNNNATPLLPDSKPSYDGLQPLTKRMASTAFFGGLGAASDSELFCSPIDSTGSLEAVHAYEVAHLGKCLIPYARLQHALTRVGTGIALDLHSLTQLPSPLCEVSHCTVLLGGEEGWSSAQLAATAAIVRFLPGHSQADSWEWNVTLSSATQLMDH--TVPCVENTSEY----GVVHEHLSLLENMEIGSKSSAVEGEVEIRKRGYVSVAGDAVRREKFVRLRFPASFSVHTMCRSFALAGEGLTAMLHLTSQAAKLLHSFEGGGGYGVVSFSPMHVELRDFSSRHVVLLTHSAFSAVCIGSSEPPALVLIPQPEVPTCPAALRELEASVRKHQDLSALLHGLSRILPGLAVVARVVPGVGQ--GMDTPPSPD-DNFGLAALSPACFVLS-----DRSAQA--TLYLVVEAAERVRVSGQAGKGDVSVDASGLRDLLLEWIA 3661
            CQDQFFFMHG LFGARQRLYDVPVAVDVL+ GRYP LPKGIEYCGGD+DPRPI+E+PANR+EI+ RVDRAIRLALLRRGG+P+ FTSH V++G L+L V GEFEL+VTLQAEREDA+W LLGV + +QAR+GE++TAP  D RQQ YLHEV+QKAMDVH+  D   + N LLAAYQVCHDLCCSM+L ILHAQAQKLATR+GGLWA QL V F KD +++       EF  G  G G DVG   +  D+E                                                               T A D                     +L  +VQ++PD+LSC +MLLAA R  AS K+  LA D+E  A QL        P V+ V G++  ICP+G G +E+SVDVKSGRYL++DTL    K+MA C+SRL EALNLLP TD+QSL  SI + LS GR V       +  A++G +QDLR Q VRRC+ E   LL R E+E  +R   G+VP  RWQALLGR D  A+ D+G +    DG  TLRS V L QFRE GV LS+ WR+R  N R+ RRG   IELT AERAAT G+VP  A  G         PL   L  S+ W QG   LP  L ASLAE+SD  D     ST +   +G    + G K   +GNVL      E+TGE + FFLEV +T ++ V+H ++ A+L TA  A  S RP V ETY + P   Q  S    GSL+  LLP++     G         KRSAS L A  S+   G               +DGL P T   A     G +G AS ++L C+ +                     +P+ARLQHAL RVGTG++LD   LT       +V HC V L GE GWSS ++AA++A V F PGH+QAD+WEW+VTL   T LMD    VP  +         G+VHE L L +++EI          + +R+ G  S +   + + K VR RFP  FSVH MCRSFALAGEGLT M  L +QA+KL  +     GY VVS SP+HV +RD    HVVLLTHSAFS+  I S++ P LVLIP P  PTCPAA+RELEASVRKH+DL+ALLHGLSR +P LA V+RV+PGVG   GM+   SP    F L A++PA FVLS     +R  Q+   L L VEA  +VRVS   G+ DV  D   LR LLLEWIA
Sbjct:  106 CQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVLRVDRAIRLALLRRGGVPNQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWALLGVTLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDANPRPNALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQIVAALGPPGEFLEGR-GLGSDVGDHSVTTDEE---------------------------------------------------------------TSAVD--------------------SLLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQL----GACVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNG-EQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAI-DAGTEFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGSGANGVKASSEGNVL------EETGEVLSFFLEVDITGNLDVEHTVVSATLPTAGRARKSLRPVVGETYKLFPC--QPLSGSRCGSLDADLLPSKPPPAVGT--------KRSASCLDAGYSQGAIGITTGV----------HDGLCPTTLHAA----VGTVGEASQTQL-CTAVQMCNRF---------------VPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEDKGLAVTRGIVHEQLPLAQHIEI----------LGVRQEGIESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKLRQTGCEAAGYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHAPTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAAGMNGDRSPSRGEFVLTAVTPARFVLSKSPLGERRLQSKPALTLAVEAGGQVRVS-TPGRKDVVADTGALRRLLLEWIA 1201

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA)

HSP 1 Score: 182 bits (463), Expect = 8.560e-43
Identity = 165/601 (27.45%), Postives = 234/601 (38.94%), Query Frame = 2

Query:   29 GALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIY--EVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHS--------------------------------------------------------------TTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVH----PPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDRLSCGQMLLAAVRTLASHKILALATDLEEIAQQLRMDNDKSNPSVSV---VNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGAQQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQRWQALLGRADNTA 1618
            G LFGARQR +DVP A+DVL +G YP LP GI +CG D D   +   + P  R  ++ RVDRA+RLALL R   P+ FTS AVR G L L V  EFEL +TL+ E  DA W L G+ +++ +R GEA+  PP D+RQ+ YL  ++Q+A+D  +                                                               ++     PLL AY++ HD C    L +L  QAQ LA R G  W   L+   D+   VLD+ +W++E+   L             A     R   + G+           P P   R++RVH       D    I + LG           A +  T A                           A+ +    LS  +++  AVRT    K+  LA D+    +            V       G  + +   G G L+I+ D+++GR ++    +      +   + L EAL L P                 GR           +AQ  A        +R  LM  L +   +  E      LG+ P  RW ALLGR   +A
Sbjct:  116 GGLFGARQRPFDVPAALDVLGSGTYPRLPLGIPWCGMDQDESSLVPTDTPEQRASVLARVDRALRLALLVREPFPAGFTSRAVRRGCLYLEVAHEFELRLTLEGEGGDAPWVLRGLDIRVASRAGEAIAPPPVDLRQRVYLQNLLQRALDAAADSASPGGTAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMADASEVVPGRPLLTAYRLAHDFCMGAQLELLSVQAQALA-RPGAPWHGCLRAVLDRAARVLDIIVWEQEYGPALP-----------TAAPPPPRGAPVNGV-----------PPPAQGRFIRVHVQRPETADAEAHIRIQLGPG---------AAEAATEA---------------------------ALHIDAAALSASRLVRDAVRTFTRRKLAVLAPDVAAALRGAPAGGXXXXSGVRARLHAGGRALRVAARGGGALDIAADLRTGRCVVLSERAEARPDASGAHAALLEALALPPGA--------------AGRA----------HAQGRAM-------LRARLMAALRMAALDAAEAAAACGLGLEPQWRWGALLGRGGASA 626

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: M4BI28_HYAAE (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI28_HYAAE)

HSP 1 Score: 108 bits (271), Expect = 5.090e-20
Identity = 141/582 (24.23%), Postives = 241/582 (41.41%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKI---QARQGEAVTAPPTDMR----------QQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVHPPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDR--LSCGQMLLAAVRTLASHKILALATDL-----EEIAQQLRMDNDK-----SNPSVSVVNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGA---QQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQR----WQALL-------GRADNTALSDSGL 1636
            D+ FFMH  L  A++R YD+  AVDVL  G Y WLP  I+     + PR + EV    ++   +V   IR  L+    IP   ++  +  G ++   +GEFE+++TLQ E  DAKW ++ V   +   QA    A  A  + +R            ++L  +VQ+AM+           P + A+ V  + C S+ L IL  Q + L   + G W N++ +T  +D+ VLD+C W K  +   A T            ++    Q ++   A + +  +LP +      + V    D N K ++S+                                N+ G        L+ A++V  +   LS   +L+AA+R   S  + ++   L     EE A    +  +K     S+ S+ +       +  F    LEI+ D++ GR+++    + K  ++   V +L   L      DTQ           GG +V S     +  + DG      ++ H  VR+ L E +A    +E+  +  T  G+   +     W+  L       G+ ++  +SD+ L
Sbjct:   97 DRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLWLPTIIKNA---MFPRELPEVEI--EQAATKVTDLIRFRLIE-AEIPDQVSNIKLEGGFVTCQAQGEFEIVLTLQGEENDAKWRVISVNTALTDPQAFGDHARAASTSALRIIRTNAPSAAHYNHLKNLVQRAMN-------KSEKPFVDAFVVMREFCSSLALQILALQGKLL---MEGRWKNRIMITHHRDQNVLDICYWPKACTRKEAQT----------LTEQQRLIQQLSEPLATARKGFTLPYSESS---LCVRLSFDPNKKKLLSVSL------------------------SPSLPPNLPGYA-----ALLSALEVPSNMFSLSAENLLIAAMRAHVSAALFSIGRLLVVGSPEETASTQLVTGEKVAMVCSDTSLRIARSDIGGLRQF----LEITFDIREGRFIVSSVAAAKHVTLYTSVKQLERIL------DTQCKIEL------GGNVVKSFPNDFALVSGDGKGNKSNEMIHASVRKVLCEIVA----DEIAQIGITFRGIEVLRNVNLNWERYLAFRQQQGGQTEDLTISDTAL 600

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A1V9ZMZ3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMZ3_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.270e-19
Identity = 78/239 (32.64%), Postives = 115/239 (48.12%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAP--------------PTDMRQQSYLH--EVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLW-ANQLKVTFDKDKEVLDLCIW 673
            D+ FF+H  L  A++R YD+P AVDVL  G Y  LPK I Y    + P+ + EV  ++   I  ++  IR  L+    IPS+FT   V  G +   V+GEFE++ TL  +  D+ W L+ +   +     +    P              PT++    Y+H   +VQK M+           P +AA  V  D CCS+ L IL AQ Q L       W  + ++  +  DK+VLD+C W
Sbjct:   96 DRLFFLHADLNRAKERNYDLPTAVDVLYGGSYTRLPKIINYA---MHPKEMPEVDEDKA--IQEMEDIIRFRLIEEE-IPSTFTRIDVEGGFVVAQVDGEFEIVFTLNGKESDSLWRLVAINTVLTDLTAQEKYKPLASTNTLRIIKANAPTELH---YMHMRNLVQKCMN-------KSDKPFVAACDVMRDFCCSLSLQILVAQGQLLTD---ARWKGSNVEFIYHADKQVLDICYW 315

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A067CQG6_SAPPC (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQG6_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 7.230e-19
Identity = 77/236 (32.63%), Postives = 116/236 (49.15%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQ---ARQGEAVTAPPTDMR--------QQSYLH--EVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLW-ANQLKVTFDKDKEVLDLCIW 673
            D+ FF+H  L  A++R YD+  A+DVL  G YP LPK I Y    + P+ + +V  ++   I  +D  IR  L+    IPS+FT   V  G +   VEGEFE++ TL  +  D+ W L+ +   +    A +     A    +R        +  Y+H   +VQK M+  S        P +AA  +  D CCS+ L IL AQ   L       W ++ ++  +  DK+VLD+C W
Sbjct:   96 DRLFFLHADLNRAKERTYDLATAIDVLYGGTYPRLPKLISYA---MHPKEMPDVDEDKA--IQEMDDIIRFRLIEEE-IPSTFTRIDVEGGFVIAHVEGEFEIVFTLNGKESDSLWRLVAINTVLTDAAATEKYKTLASTNTLRIIKANAPTELHYMHMRNLVQKCMNKSSA-------PFVAACDIMRDFCCSLSLQILVAQGHLLTD---SRWKSSNVEFVYHADKQVLDICYW 315

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A3M6VE54_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE54_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.420e-17
Identity = 77/237 (32.49%), Postives = 117/237 (49.37%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKI---QARQGEAVTAPPTDMR----------QQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQK 679
            D+ FFMH  L  A++R YD+  AVDVL  G Y  LP  I+     + PR + EV  N  E    V   IR  L+    IP   ++  +  G ++  VEGEFE+++T+Q +  DAKW ++ V   +   +A +  A  A  + +R            ++L  +VQ+AM+           P + A+ V    C S+ L IL +Q  KL T   G W N++ +   +D+ VLD+C W K
Sbjct:   97 DRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIIKNV---MFPRELPEV--NTDEAAMEVADIIRFRLIGEE-IPEQVSNIKLEGGFVTCQVEGEFEIVLTIQGKENDAKWRVISVITALTEPKAFEDHAQAASTSALRIIRTNSPSAAHYNHLKNLVQRAMN-------KSEKPFVDAFVVMRQFCSSLALQILASQG-KLLTE--GRWKNRIMIKHHRDQNVLDICYWPK 317

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: D8RD42_SELML (Mediator of RNA polymerase II transcription subunit 14 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RD42_SELML)

HSP 1 Score: 87.0 bits (214), Expect = 2.990e-13
Identity = 63/208 (30.29%), Postives = 107/208 (51.44%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKV 631
            D  F++H +L  +R  +YDV  A+DVL  G +P +PK IE    DL+ +P+ E    +  ++ ++D  +R  LL    +P  FTS +VRDG L+L V+GEFE+ +TL      + W +L +K+ +    GE+         Q+  L + +++ M        A  NP    Y V H+ C ++++  L  Q + L     G W + +++
Sbjct:   93 DSMFYLHESLQQSRAPMYDVASAMDVLFTGGFPRMPKCIE----DLNVQPVLE-GWKKDNVLQKLDTLLRSKLLDIA-VPKEFTSVSVRDGRLTLRVDGEFEVELTLGYRGNASLWRVLHLKLLV----GESSRPAKFSDMQRFALSDDLERRMS-------ALENPFGIIYTVLHEFCAALVMDTLWRQVRALRH---GRWKDAIRL 280

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: F0W2P3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2P3_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 4.270e-13
Identity = 71/236 (30.08%), Postives = 115/236 (48.73%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKV------KIQARQGEAV-------TAP-PTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIW 673
            D+ FFMH  L  A++R+YD+  A+DVL  G Y  LP  IE     + PR     P N  +    ++  IR  L++   IP  FTS ++  G +     G+FE++ TLQ  + DA W ++ V         +Q  Q  +        +AP PT   Q +++  ++Q A++ H+        P L A+++  + C S+ L IL +QAQ L   + G W ++L   + +   +LD   W
Sbjct:   98 DRLFFMHANLDRAKERMYDLSTAIDVLYKGSYLRLPSVIERA---MYPREF--PPHNLTKTADTLNNLIRYRLIQ-SNIPKQFTSISLDHGFVYFTCSGQFEIVFTLQGLQPDAVWHVVRVHTILTDVNALQQYQTHSSAFRIFQNSAPNPT---QYAHIRNLLQTALN-HA------EEPFLEAFKLMKEFCASLALHILRSQAQLL---LDGPWKHRLSTVYHRQGNMLDFMYW 314

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A830D088_9LAMI (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D088_9LAMI)

HSP 1 Score: 85.1 bits (209), Expect = 1.180e-12
Identity = 62/213 (29.11%), Postives = 101/213 (47.42%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKD 646
            D  FFMH  L  AR  +YDVP A+++L+ G Y  LPK IE  G         + PA +K     ++  +R  LL    +P   T   V DG +SL V+GEF++LVTL      + W +L +++ +  R G        +  ++  L + +++ M        A  NP +  Y + H+LC ++++  +  Q Q L     G W + ++     D
Sbjct:   97 DSMFFMHEGLQQARAPIYDVPSAIEILLGGTYQRLPKCIEDVGTQSTLNEDQQGPALKK-----LETLVRSKLLEIS-LPKEITEIKVYDGVVSLRVDGEFKVLVTLGYRGHLSMWRILHLELLVGERSGPV----KLEESRRHVLGDDLERRM-------AASENPFMILYSILHELCVALIMDTVIRQVQALRQ---GRWRDAIRFELISD 289

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BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A068UE38_COFCA (Mediator of RNA polymerase II transcription subunit 14 n=5 Tax=Coffea TaxID=13442 RepID=A0A068UE38_COFCA)

HSP 1 Score: 84.7 bits (208), Expect = 1.550e-12
Identity = 64/213 (30.05%), Postives = 100/213 (46.95%), Query Frame = 2

Query:    8 DQFFFMHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKD 646
            D  FFMH  L  AR  +YDVP AV+VL+NG Y  LPK IE  G         + PA     + ++D  +R  LL    +P   T   + DG + L V+GEF++LVTL      + W +L +++ +  R G        +  Q+  L + +++ M        A  N  +  Y + H+LC ++++  +  Q Q L     G W + +K     D
Sbjct:   96 DSMFFMHEGLQQARAPIYDVPSAVEVLLNGTYHRLPKCIEDVGTQSTLNVDQQKPA-----LMKLDALVRSKLLEVS-LPKDITEVKISDGTVLLRVDGEFKVLVTLGYRGHLSLWRILHLELLVGERSGPV----KLEELQRHALGDDLERRM-------AAAENAFMTLYSILHELCVALVMDTVIRQVQALRQ---GRWKDAIKFELISD 288

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FMK4_ECTSI	0.000e+0	48.27	Mediator of RNA polymerase II transcription subuni...	[more]
A0A836CA29_9STRA	8.560e-43	27.45	Mediator of RNA polymerase II transcription subuni...	[more]
M4BI28_HYAAE	5.090e-20	24.23	Mediator of RNA polymerase II transcription subuni...	[more]
A0A1V9ZMZ3_9STRA	4.270e-19	32.64	Mediator of RNA polymerase II transcription subuni...	[more]
A0A067CQG6_SAPPC	7.230e-19	32.63	Mediator of RNA polymerase II transcription subuni...	[more]
A0A3M6VE54_9STRA	3.420e-17	32.49	Mediator of RNA polymerase II transcription subuni...	[more]
D8RD42_SELML	2.990e-13	30.29	Mediator of RNA polymerase II transcription subuni...	[more]
F0W2P3_9STRA	4.270e-13	30.08	Mediator of RNA polymerase II transcription subuni...	[more]
A0A830D088_9LAMI	1.180e-12	29.11	Mediator of RNA polymerase II transcription subuni...	[more]
A0A068UE38_COFCA	1.550e-12	30.05	Mediator of RNA polymerase II transcription subuni...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5231	contig	H-paniculata_contig5231:1041..8502 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	941.4
Seed ortholog evalue	4.2e-271
Seed eggNOG ortholog	2880.D7FMK4
Preferred name	MED14
KEGG ko	ko:K15156
KEGG Pathway	ko04919,map04919
Hectar predicted targeting category	other localisation
GOs	GO:0000122,GO:0000428,GO:0001085,GO:0001091,GO:0001093,GO:0001098,GO:0001099,GO:0001103,GO:0003674,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0014070,GO:0016070,GO:0016591,GO:0016592,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0023052,GO:0030374,GO:0030518,GO:0030521,GO:0030522,GO:0030880,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032870,GO:0032991,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0038023,GO:0042221,GO:0042809,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051427,GO:0051716,GO:0055029,GO:0060089,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0070491,GO:0070847,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071704,GO:0080090,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.	regulation of transcription by RNA polymerase II
EggNOG OGs	KOG1875@1,KOG1875@2759
Ec32 ortholog description	Mediator complex, subunit Med14
Ec32 ortholog	Ec-23_000640.1
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko03021
Exons	9
Model size	4742
Cds size	3669
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930521.3203776-UTR-H-paniculata_contig5231:1040..2091	1622930521.3203776-UTR-H-paniculata_contig5231:1040..2091	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5231 1041..2091 -
1691481329.8124561-UTR-H-paniculata_contig5231:1040..2091	1691481329.8124561-UTR-H-paniculata_contig5231:1040..2091	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5231 1041..2091 -
1622930521.4783432-UTR-H-paniculata_contig5231:8480..8502	1622930521.4783432-UTR-H-paniculata_contig5231:8480..8502	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5231 8481..8502 -
1691481329.9300199-UTR-H-paniculata_contig5231:8480..8502	1691481329.9300199-UTR-H-paniculata_contig5231:8480..8502	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig5231 8481..8502 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5231.12598.1	prot_H-paniculata_contig5231.12598.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig5231 2092..8480 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig5231:1041..8502-
coding sequence from alignment at H-paniculata_contig5231:1041..8502-

protein sequence of mRNA_H-paniculata_contig5231.12598.1

>prot_H-paniculata_contig5231.12598.1 ID=prot_H-paniculata_contig5231.12598.1|Name=mRNA_H-paniculata_contig5231.12598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1223bp
MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVP
ANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLV
TLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMD
VHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQ
LKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAIT
GIAAESTRAASLPPAPIGCRYMRVHPPVDRNGKIVVSLGTVGEWFQDRTF
AGDDGTMADDGDGDGDGDVYNVSGKGRTTADVLVGAVQVHPDRLSCGQML
LAAVRTLASHKILALATDLEEIAQQLRMDNDKSNPSVSVVNGVTVSICPF
GNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQS
LSASITAALSGGRLVPSIWRPSSNYAQDGAQQDLRHQQVRRCLMECLALL
LREEVETVWRTTLGMVPCQRWQALLGRADNTALSDSGLDLSVQDGFGTLR
SFVCLAQFREEGVKLSDEWRRRRVNGRLRRRGPGVIELTTAERAATPGRV
PLTAPDGTILSQGVVDPLSVALGLSTDWHQGDEGLPGLVASLAEMSDTED
VDASTSFIRAKGGSRDSPGEKDGNVLPACDVLEDTGEEIYFFLEVAVTAS
MKVKHMLIVASLSTAAGACPSRRPKVNETYHIRPSSLQQSSYGSYGSLEI
ALLPAETVVGTGLIERASLLGKRSASDLRASDSKRRNGTNNNATPLLPDS
KPSYDGLQPLTKRMASTAFFGGLGAASDSELFCSPIDSTGSLEAVHAYEV
AHLGKCLIPYARLQHALTRVGTGIALDLHSLTQLPSPLCEVSHCTVLLGG
EEGWSSAQLAATAAIVRFLPGHSQADSWEWNVTLSSATQLMDHTVPCVEN
TSEYGVVHEHLSLLENMEIGSKSSAVEGEVEIRKRGYVSVAGDAVRREKF
VRLRFPASFSVHTMCRSFALAGEGLTAMLHLTSQAAKLLHSFEGGGGYGV
VSFSPMHVELRDFSSRHVVLLTHSAFSAVCIGSSEPPALVLIPQPEVPTC
PAALRELEASVRKHQDLSALLHGLSRILPGLAVVARVVPGVGQGMDTPPS
PDDNFGLAALSPACFVLSDRSAQATLYLVVEAAERVRVSGQAGKGDVSVD
ASGLRDLLLEWIAPSRAQSDVV*

mRNA from alignment at H-paniculata_contig5231:1041..8502-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig5231.12598.1 ID=mRNA_H-paniculata_contig5231.12598.1|Name=mRNA_H-paniculata_contig5231.12598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7462bp|location=Sequence derived from alignment at H-paniculata_contig5231:1041..8502- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGTCAGGATCAATTCTTCTTCATGCACGGGGCGCTTTTTGGAGCTCGAC
AACGTCTCTACGATGTCCCTGTTGCTGTGGATGTCCTCGTCAACGGGCGG
TATCCCTGGCTGCCAAAGGGGATTGAGTACTGCGGTGGAGATCTGGACCC
GCGCCCCATCTATGAGGTCTGTTTTAATGCTTCGACAAATAAGATTAGCG
GTGCATGTTTACCGAAGGTCTGGTTCTTGTCTTAATAATCAACTAGAATA
ACTAAACTAACGGTTGTTTTTGGCTTCTAAATAGAACTCAAGTTTTGAAG
GCTCGCAAGAGTCGACCGTGAACCATACCGAATGGCCCAAGCAGCTTGTA
TGTTGGCGCTCTGAACGATGGCCTTGTTTTACTGTACAGGACGTATATAA
TAAGCCTATATATACTGTGTGCAACGCCTATTTTCTCTATGGACATTGTG
GTCATTTGACTATTTTCTTCAATTGCTTTCTTTTGCCACAGGTGCCCGCA
AACCGCAAGGAAATCATCCCACGCGTGGACCGCGCCATCCGCTTGGCTCT
ACTTCGGCGAGGTGGAATTCCAAGCTCATTCACCAGCCACGCTGTACGCG
ACGGTGCGCTCTCTCTTGCAGTCGAAGGGGAATTTGAGGTAAGAAATACC
ATGTAAAGCAACAGTAGTTCGACAGGTTTAAACAGCAGCCGACCACGAGC
CGTCTTTTGCCTTGCCTTGCCTTGCCTTGCCTTGCTTTGTTCACCCGGCG
TGATTCGCTCGTGCTCGTTCAAAGCGACTCACTTGTGCTCGTGCAACGTG
GCGTGGCGTGACGTGACGTGACGTGACGTGCAGCTGTTGGTGACGCTTCA
GGCGGAGAGGGAAGACGCGAAGTGGACGTTACTTGGGGTCAAAGTCAAAA
TCCAAGCGCGTCAGGGAGAGGCTGTCACTGCACCGCCAACGGATATGCGC
CAGCAAAGGTTAGAAGGACCTTGGTTGCGCAGAAGGTAGTTTTCTCTATG
CTCGTGTGCACGTTCGCTCAGCAAGTGTATTTATTTGAGCGTGTGGTGGC
AGAAACGTGGAGGAATTTTTTCTGATATGACCACGCAGTATTGATGATCG
ATGGCATCATTAATCGTTAAGCAGAAGCCCCAACTGGGCGCTTGTAAATT
AGGTAACAGAGCTGAAGGGACCAGGAACCATAGCTTGGCAAGTAATTGAA
AAACTCAACCCTTCAGTCAATCACCTACATGAACTTGACGGCAACATGCT
CTCCACGTGCTTTATTTCGTTACAGTTATCTCCACGAGGTGGTCCAAAAG
GCGATGGATGTGCACAGTACGACCGATCAAGCAAAGTCGAACCCGCTTTT
GGCTGCGTATCAAGTCTGTCATGACCTGTGCTGCAGTATGATGCTCGGGA
TCCTGCATGCCCAAGCTCAAAAATTAGCCACTAGAATAGGAGGTTTGTGG
GCTAACCAGCTGAAGGTCACATTCGACAAGGACAAGGAGGTAAGCTGTAA
GCTGTTTGTCCCAAAACGTGGGTGTTTCGCGTCATGCTTCTGCACCCCTC
CCAGAACGTGGGGCATTTCAGACTGCACGTGGGGCATACAAGTATTCCTG
TTGCACGCTTGCCCTTCCTTGCCCTTGCCGGTAGGTGCTCGATTTGTGCA
TTTGGCAAAAAGAATTTTCTACTGGCCTGGCGGGAACGGGTCGAGATGTT
GGAGTGGGGGGCATTCGTGCCGACGATGAGATGCTGCGCTACCAGGCAAT
CACGGGAATCGCTGCAGAATCAACTAGAGCAGCCAGCCTTCCACCAGCTC
CAATTGGATGTCGGTATATGCGGGTGCATCCGCCAGTGGACAGGAACGGG
AAGGTACTACAATATGGGAATGATGAGGTTGGGACCGTGTGGTTTCCGTT
GCTATTTATGAAATGATGAGACGATACACATGCATTTGATTGGAAATTGT
CACGGGTACTTCCTTGTAAGTAGGATCGTATAACGAAGGTACAGTTGCAA
CGACCAGCACTGCGGAGGCCAAATATGATGGCTTTGTGTGCCGTGTGACG
GCTGTTGTTGCGTGCCGTGTGGTGTGTGGGCGACTCTGCCGTCTACAGCA
TAAAATCCTCAACAACAAATGTGAGGGATTCGGCGTTTGTGCCACAAGAT
TGGGGTTGGCAAAAGCAACAGCCACTTTTGCGAATTATGACCGTCATAGT
TACTTATTTGTTCCCCTTGATAACTAAGGCATTCGAACATTCTCAAATGT
GACTGTTTGCTTGGTTTTTAAGAGCTTTTTCTGCCAAGATAAAAATTATT
CTCAGCGCTGATGTGAGCTGAGGACTTTGAGAGCGCATTCTTCGCCAAGT
ACAATCTTGGACCTTCGATAGTTTAAATTCTGTTTGACGTGTGATGACCT
TACTGCAGATCCGATGGCCACGTTGTTGCAGATAGTGGTTTCACTGGGTA
CTGTGGGCGAGTGGTTCCAAGATCGCACTTTTGCAGGCGATGACGGGACC
ATGGCGGATGATGGTGATGGTGATGGTGATGGTGATGTTTACAACGTGTC
GGGCAAGGGAAGAACGACGGCAGATGTGCTAGTAGGAGCCGTTCAAGTGC
ACCCCGACAGGCTGAGCTGCGGGCAGATGTTGTTAGCTGCCGTCAGGACG
CTCGCCTCGCACAAAATTTTGGCGTTGGCAACAGATCTCGAGGAAATAGC
ACAGCAGCTGCGGTGGGTGTTTATCATGTTCGGCGTGCTTGTTATCTTGT
TTCTGAGCTGTCGAGAGGTTGCCTTTTCTGGATACTTGGGCACAGTTGGC
TAAGGTAAATTATAAACTAAGTTTATTTCCGACATGGATTTGTACTTGGC
ATGAATCGATTACACTATTACGGGAGAGACGTCGTTAACGTTTGTCTACG
CTCATTTGACGTTGAAATGGCTGGGCAGTACAGTATTTATCATTTAAGTA
TTCAAATATTGGGCATTTGACTTATGTTCCCTTCACCGTGTCTGGCGCTA
AAATTTATAATTCATTTGTTGCTCAGAATGGACAACGACAAAAGCAACCC
TAGTGTCTCCGTCGTCAACGGCGTGACTGTCTCCATCTGTCCGTTCGGAA
ATGGATGCTTGGAGATCTCTGTAGATGTGAAGAGTGGAAGGTGAGATGTT
GGTGAAGGAGCTTGTGTTTTTTTCAAGGCCACAATAGGGTAGTTTGGGTG
TTCATGTAGCATTGATGCCTCTCATTTCGTTCCGGTGCAGTTATCTCACA
CGCTTTCCGGAACCGTAATGCAACCGTGTGCAGGTATCTCATCCAGGATA
CCTTGTCGCGCAAGAGTAAATCCATGGCGCGGTGTGTGTCTCGCCTTGGC
GAGGCTTTGAATCTCTTGCCCCCTACGGATACGCAGAGCTTGAGTGCATC
CATTACTGCCGCCCTGTCGGGCGGTAGACTTGTGCCGTCAATATGGCGAC
CATCAAGCAACTACGCGCAAGATGGGGCGCAGCAGGATCTCCGGCACCAG
CAGGTGTGCAGTGCTATTTCTATTCATAAATATTCAGTTATGCAGTTGTA
GTCCGGGTCATGGAGGTCGTGCACCACTTGAAAAATATTTCAGGAGTGAT
TTACAGTGATGATGATGGATGGAGTGTATACGATACACACTGGGTTTTGG
GTCAGTCTGGGATATCGAGGGGAATAAAAAAATGACAGATTGAGAATCGA
TATTCGAAAAGTGCTAGATGGTGTATGATGAGTTGAAACGACGCATTGGT
GCAAAGTATACCTATCCTCAAGATGTTCAACTCGTGACGGTAGGTGACAT
GACACCCGTGGCACTGAAATGACCCGGAATCCTCATGATATTTACTGCTC
CTTCCGTTTTGTTGACCTTCGGCTTGGACATGCATGATTTTTTTGGTATT
ACTATATGATAGTTGCCTGGTACCAGGCGATGGAGGTGTGTTTCGGCATT
CATGGTCACAATTGAACGTGCGTGGCAACGTGTTTTGAGTCGTTTTTTAG
GCAACCAGCCATTGGATGGGAGTTGTGTATGTGTTATGGAAAATCCTGAG
CGAGGAGCCTGAACGGCGCACGTAAAACAAGCGATCGTCTCTTCGAGGTC
TCTAGATTTCATGCAGAAGTTGTGGGTGACATGCCTTTACTTACCTTGCC
ACCTTCGCGAACGCTGGCTTACGTGGAATTGTCGAATTGAAATCTACTAT
TGCAAGGTGCGGCGATGCCTGATGGAATGTTTGGCGCTCCTTCTTCGTGA
AGAGGTCGAGACTGTTTGGCGCACTACGTTGGGGATGGTTCCCTGCCAGC
GCTGGCAAGCTCTGCTGGGGCGTGCAGATAATACAGCGTTGAGCGATTCG
GGCTTGGACTTGTCTGTCCAAGATGGTTTTGGCACGTTAAGATCTTTCGT
CTGTCTCGCCCAGTTTCGAGAGGAGGGCGTAAAGCTGTCAGATGAATGGC
GACGTAGACGAGTCAATGGCCGTCTACGACGAAGAGGTCCGGGGGTGATC
GAGCTGACAACTGCGGAGAGAGCCGCGACACCGGGGCGAGTTCCCTTGAC
GGCGCCAGACGGTACCATACTGAGCCAGGGCGTTGTAGACCCTCTGTCGG
TCGCTTTAGGTTTGAGTACTGATTGGCATCAGGGCGACGAAGGTCTACCC
GGACTTGTGGCCTCTCTAGCGGAAATGTCGGACACGGAAGATGTGGATGC
ATCCACGTCGTTCATCCGAGCGAAGGGCGGGTCTCGAGATTCACCAGGCG
AAAAAGATGGGAACGTGTTACCCGCGTGCGATGTGCTAGAGGACACAGGC
GAGGAGATTTATTTTTTTCTGGAGGTGGCAGTGACTGCGAGTATGAAGGT
AAAGCACATGCTCATCGTGGCGTCGCTATCGACGGCTGCGGGAGCATGTC
CATCTCGTCGACCGAAGGTTAATGAGACGTACCACATACGACCTTCTTCA
TTGCAGCAATCGTCGTATGGTTCGTATGGTTCGCTCGAAATAGCTTTGCT
TCCGGCCGAGACAGTTGTGGGTACAGGCCTTATTGAGAGGGCATCGCTAT
TGGGGAAGCGTTCTGCGTCGGACTTACGTGCAAGCGATAGCAAACGGCGA
AATGGTACCAACAACAACGCTACTCCTTTGTTACCTGACAGTAAGCCTTC
CTACGATGGGTTACAGCCCCTTACCAAAAGAATGGCTTCCACTGCCTTCT
TTGGAGGACTCGGTGCCGCATCTGATTCAGAGTTATTCTGCTCACCAATT
GACTCAACTGGTTCATTAGAAGCTGTTCATGCTTACGAGGTGGCCCATCT
AGGGAAATGTCTTATCCCGTACGCGCGACTACAGCATGCCCTCACGAGAG
TAGGCACAGGGATAGCCCTGGACCTACACAGCTTGACTCAACTTCCAAGC
CCTCTCTGTGAAGTGTCGCATTGCACGGTGCTTTTGGGTGGTGAGGAGGG
ATGGTCAAGTGCGCAGCTTGCGGCGACTGCGGCGATTGTTCGTTTCCTTC
CTGGACATAGCCAAGCGGATAGCTGGGAGTGGAATGTGACCCTGAGCTCT
GCGACGCAGCTGATGGATCACACTGTGCCCTGCGTTGAAAATACCAGCGA
ATATGGGGTTGTCCATGAACATTTGTCATTGCTCGAAAACATGGAGATTG
GATCCAAGTCTTCGGCCGTCGAGGGTGAGGTCGAGATTCGAAAGAGAGGT
TATGTATCAGTTGCAGGCGATGCAGTGCGACGTGAAAAGTTCGTTCGACT
CCGTTTTCCGGCCTCCTTTTCCGTACACACCATGTGTCGCTCGTTTGCCT
TGGCTGGTGAGGGTTTGACAGCAATGTTACATTTAACCTCTCAGGCAGCA
AAGTTGTTGCACTCCTTCGAGGGGGGTGGGGGATATGGTGTGGTATCGTT
TAGCCCCATGCACGTCGAATTGCGCGACTTTAGCTCCAGGCATGTTGTGC
TCCTCACGCATAGTGCCTTTTCAGCGGTGTGCATTGGTTCCTCGGAGCCG
CCGGCACTCGTCTTGATTCCGCAACCGGAAGTTCCGACGTGCCCCGCCGC
TTTGCGGGAACTTGAAGCTTCAGTGAGGAAACACCAGGACCTGAGTGCCC
TGTTGCATGGTCTCTCACGAATTCTCCCTGGTCTTGCGGTTGTAGCTAGG
GTTGTGCCAGGAGTAGGACAAGGTATGGATACACCGCCCAGTCCTGACGA
CAACTTCGGGCTTGCAGCGTTGAGTCCGGCGTGCTTTGTGTTGTCAGACC
GTTCTGCACAAGCGACCCTCTATTTGGTGGTGGAAGCAGCAGAGCGTGTC
CGGGTATCCGGGCAAGCTGGGAAAGGCGACGTCTCCGTCGACGCATCTGG
ATTGCGAGATTTGTTGCTTGAATGGATCGCACCATCTCGCGCGCAATCTG
ATGTGGTGTAATATAAGTAGTGATACCTTCTGCAACAAGGGTAATTGCTG
TGCTCCCAGCCTTGTCTTGCCCAATTTGATAGGACGAGCACATTTTTTTT
CCCGACTACAGCGCAATTCTTTGTGTTGCTCTGCGCCTGCAATGCCCGTG
GGAGGTCACCAATGACACCCAACATCAACCATTCCCTACCCGGGCGATTG
AGCCACGTTTGGTATCTGGGTACGCAAGTGTGTGTAGTGGTTGTAGTCGC
ATGGGCTTTGCGTAACTGGTTGATGTATTTCAAATCATGGCTGTTCACTG
TGTGTGCTGTGTGTGCTGTGTGTGCTGTGTGCTCTTCATTCTTGGTGTAC
TACTTACTACCTCATTGGAGTAGTGCAGTGACAACTGTGTTTTGATGACA
TGTTCAAGATGCCGCCAATGACCCGCGTTGTATGTTGTACAACTCCTACC
TATCATCAGGTTGTGCATGGATGGGGTTCTAAAGTATGCAGCGCGTGAAA
AATGTCGATCGGTTGGAACACTCGTGGGAATGATGTTAATTTGCCGAACA
AACCGGAGATTCATGTTGTGTCCGCAGCGTGGTTGGTTGTTGGTATTGAC
TTCCCAACACTTGTGCAAATGATTGTGTTCGCGTTGTTTTGAGCGTACAG
TACAGTGTAGTGTTCAAAGTACATTGAGTGATATGCGTTTGACGTTTTAC
AACGCCACACGGAGGACGTGTGTTTTGAAGCACTTGGAGGGTTTTACAGT
TTGTTTACAAGATGTGACGTGACAAAAGTGTAGTATGTGTGTTTTGCAAC
TTGTCGGCGAGTAAGTGCACCGTTGTATTGTTGGCATTTCATGAGTTTTG
TGACTTGTTTACAATACGTATGTATGTAGCAAAGTATATGTAGTTTATGT
TGTAAACCTATATTGTTTGGTTGGAACTCATGGCGTTTCGACGTACGTTT
TGCAACATGAAAATGTGCTGCTGTAAACACTGAGATTTTTCCGATTTTTT
TGCTACACCCGACGGACCACATGTGTAATTAGTGTGTCTGCAGCCGTTTT
GGTAACTGTATG

Coding sequence (CDS) from alignment at H-paniculata_contig5231:1041..8502-

>mRNA_H-paniculata_contig5231.12598.1 ID=mRNA_H-paniculata_contig5231.12598.1|Name=mRNA_H-paniculata_contig5231.12598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7338bp|location=Sequence derived from alignment at H-paniculata_contig5231:1041..8502- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACGGGGCGCTTTTTGGAGCTCGACAACGTCTCTACGATGTCCCTGT
TGCTGTGGATGTCCTCGTCAACGGGCGGTATCCCTGGCTGCCAAAGGGGA
TTGAGTACTGCGGTGGAGATCTGGACCCGCGCCCCATCTATGAGATGCAC
GGGGCGCTTTTTGGAGCTCGACAACGTCTCTACGATGTCCCTGTTGCTGT
GGATGTCCTCGTCAACGGGCGGTATCCCTGGCTGCCAAAGGGGATTGAGT
ACTGCGGTGGAGATCTGGACCCGCGCCCCATCTATGAGGTGCCCGCAAAC
CGCAAGGAAATCATCCCACGCGTGGACCGCGCCATCCGCTTGGCTCTACT
TCGGCGAGGTGGAATTCCAAGCTCATTCACCAGCCACGCTGTACGCGACG
GTGCGCTCTCTCTTGCAGTCGAAGGGGAATTTGAGGTGCCCGCAAACCGC
AAGGAAATCATCCCACGCGTGGACCGCGCCATCCGCTTGGCTCTACTTCG
GCGAGGTGGAATTCCAAGCTCATTCACCAGCCACGCTGTACGCGACGGTG
CGCTCTCTCTTGCAGTCGAAGGGGAATTTGAGCTGTTGGTGACGCTTCAG
GCGGAGAGGGAAGACGCGAAGTGGACGTTACTTGGGGTCAAAGTCAAAAT
CCAAGCGCGTCAGGGAGAGGCTGTCACTGCACCGCCAACGGATATGCGCC
AGCAAAGCTGTTGGTGACGCTTCAGGCGGAGAGGGAAGACGCGAAGTGGA
CGTTACTTGGGGTCAAAGTCAAAATCCAAGCGCGTCAGGGAGAGGCTGTC
ACTGCACCGCCAACGGATATGCGCCAGCAAAGTTATCTCCACGAGGTGGT
CCAAAAGGCGATGGATGTGCACAGTACGACCGATCAAGCAAAGTCGAACC
CGCTTTTGGCTGCGTATCAAGTCTGTCATGACCTGTGCTGCAGTATGATG
CTCGGGATCCTGCATGCCCAAGCTCAAAAATTAGCCACTAGAATAGGAGG
TTTGTGGGCTAACCAGCTGAAGGTCACATTCGACAAGGACAAGGAGTTAT
CTCCACGAGGTGGTCCAAAAGGCGATGGATGTGCACAGTACGACCGATCA
AGCAAAGTCGAACCCGCTTTTGGCTGCGTATCAAGTCTGTCATGACCTGT
GCTGCAGTATGATGCTCGGGATCCTGCATGCCCAAGCTCAAAAATTAGCC
ACTAGAATAGGAGGTTTGTGGGCTAACCAGCTGAAGGTCACATTCGACAA
GGACAAGGAGGTGCTCGATTTGTGCATTTGGCAAAAAGAATTTTCTACTG
GCCTGGCGGGAACGGGTCGAGATGTTGGAGTGGGGGGCATTCGTGCCGAC
GATGAGATGCTGCGCTACCAGGCAATCACGGGAATCGCTGCAGAATCAAC
TAGAGCAGCCAGCCTTCCACCAGCTCCAATTGGATGTCGGTATATGCGGG
TGCATCCGCCAGTGGACAGGAACGGGAAGGTGCTCGATTTGTGCATTTGG
CAAAAAGAATTTTCTACTGGCCTGGCGGGAACGGGTCGAGATGTTGGAGT
GGGGGGCATTCGTGCCGACGATGAGATGCTGCGCTACCAGGCAATCACGG
GAATCGCTGCAGAATCAACTAGAGCAGCCAGCCTTCCACCAGCTCCAATT
GGATGTCGGTATATGCGGGTGCATCCGCCAGTGGACAGGAACGGGAAGAT
AGTGGTTTCACTGGGTACTGTGGGCGAGTGGTTCCAAGATCGCACTTTTG
CAGGCGATGACGGGACCATGGCGGATGATGGTGATGGTGATGGTGATGGT
GATGTTTACAACGTGTCGGGCAAGGGAAGAACGACGGCAGATGTGCTAGT
AGGAGCCGTTCAAGTGCACCCCGACAGGCTGAGCTGCGGGCAGATGTTGT
TAGCTGCCGTCAGGACGCTCGCCTCGCACAAAATTTTGGCGTTGGCAACA
GATCTCGAGGAAATAGCACAGCAGCTGCGATAGTGGTTTCACTGGGTACT
GTGGGCGAGTGGTTCCAAGATCGCACTTTTGCAGGCGATGACGGGACCAT
GGCGGATGATGGTGATGGTGATGGTGATGGTGATGTTTACAACGTGTCGG
GCAAGGGAAGAACGACGGCAGATGTGCTAGTAGGAGCCGTTCAAGTGCAC
CCCGACAGGCTGAGCTGCGGGCAGATGTTGTTAGCTGCCGTCAGGACGCT
CGCCTCGCACAAAATTTTGGCGTTGGCAACAGATCTCGAGGAAATAGCAC
AGCAGCTGCGAATGGACAACGACAAAAGCAACCCTAGTGTCTCCGTCGTC
AACGGCGTGACTGTCTCCATCTGTCCGTTCGGAAATGGATGCTTGGAGAT
CTCTGTAGATGTGAAGAGTGGAAGAATGGACAACGACAAAAGCAACCCTA
GTGTCTCCGTCGTCAACGGCGTGACTGTCTCCATCTGTCCGTTCGGAAAT
GGATGCTTGGAGATCTCTGTAGATGTGAAGAGTGGAAGGTATCTCATCCA
GGATACCTTGTCGCGCAAGAGTAAATCCATGGCGCGGTGTGTGTCTCGCC
TTGGCGAGGCTTTGAATCTCTTGCCCCCTACGGATACGCAGAGCTTGAGT
GCATCCATTACTGCCGCCCTGTCGGGCGGTAGACTTGTGCCGTCAATATG
GCGACCATCAAGCAACTACGCGCAAGATGGGGCGCAGCAGGATCTCCGGC
ACCAGCAGGTATCTCATCCAGGATACCTTGTCGCGCAAGAGTAAATCCAT
GGCGCGGTGTGTGTCTCGCCTTGGCGAGGCTTTGAATCTCTTGCCCCCTA
CGGATACGCAGAGCTTGAGTGCATCCATTACTGCCGCCCTGTCGGGCGGT
AGACTTGTGCCGTCAATATGGCGACCATCAAGCAACTACGCGCAAGATGG
GGCGCAGCAGGATCTCCGGCACCAGCAGGTGCGGCGATGCCTGATGGAAT
GTTTGGCGCTCCTTCTTCGTGAAGAGGTCGAGACTGTTTGGCGCACTACG
TTGGGGATGGTTCCCTGCCAGCGCTGGCAAGCTCTGCTGGGGCGTGCAGA
TAATACAGCGTTGAGCGATTCGGGCTTGGACTTGTCTGTCCAAGATGGTT
TTGGCACGTTAAGATCTTTCGTCTGTCTCGCCCAGTTTCGAGAGGAGGGC
GTAAAGCTGTCAGATGAATGGCGACGTAGACGAGTCAATGGCCGTCTACG
ACGAAGAGGTCCGGGGGTGATCGAGCTGACAACTGCGGAGAGAGCCGCGA
CACCGGGGCGAGTTCCCTTGACGGCGCCAGACGGTACCATACTGAGCCAG
GGCGTTGTAGACCCTCTGTCGGTCGCTTTAGGTTTGAGTACTGATTGGCA
TCAGGGCGACGAAGGTCTACCCGGACTTGTGGCCTCTCTAGCGGAAATGT
CGGACACGGAAGATGTGGATGCATCCACGTCGTTCATCCGAGCGAAGGGC
GGGTCTCGAGATTCACCAGGCGAAAAAGATGGGAACGTGTTACCCGCGTG
CGATGTGCTAGAGGACACAGGCGAGGAGATTTATTTTTTTCTGGAGGTGG
CAGTGACTGCGAGTATGAAGGTAAAGCACATGCTCATCGTGGCGTCGCTA
TCGACGGCTGCGGGAGCATGTCCATCTCGTCGACCGAAGGTTAATGAGAC
GTACCACATACGACCTTCTTCATTGCAGCAATCGTCGTATGGTTCGTATG
GTTCGCTCGAAATAGCTTTGCTTCCGGCCGAGACAGTTGTGGGTACAGGC
CTTATTGAGAGGGCATCGCTATTGGGGAAGCGTTCTGCGTCGGACTTACG
TGCAAGCGATAGCAAACGGCGAAATGGTACCAACAACAACGCTACTCCTT
TGTTACCTGACAGTAAGCCTTCCTACGATGGGTTACAGCCCCTTACCAAA
AGAATGGCTTCCACTGCCTTCTTTGGAGGACTCGGTGCCGCATCTGATTC
AGAGTTATTCTGCTCACCAATTGACTCAACTGGTTCATTAGAAGCTGTTC
ATGCTTACGAGGTGGCCCATCTAGGGAAATGTCTTATCCCGTACGCGCGA
CTACAGCATGCCCTCACGAGAGTAGGCACAGGGATAGCCCTGGACCTACA
CAGCTTGACTCAACTTCCAAGCCCTCTCTGTGAAGTGTCGCATTGCACGG
TGCTTTTGGGTGGTGAGGAGGGATGGTCAAGTGCGCAGCTTGCGGCGACT
GCGGCGATTGTTCGTTTCCTTCCTGGACATAGCCAAGCGGATAGCTGGGA
GTGGAATGTGACCCTGAGCTCTGCGACGCAGCTGATGGATCACACTGTGC
CCTGCGTTGAAAATACCAGCGAATATGGGGTTGTCCATGAACATTTGTCA
TTGCTCGAAAACATGGAGATTGGATCCAAGTCTTCGGCCGTCGAGGGTGA
GGTCGAGATTCGAAAGAGAGGTTATGTATCAGTTGCAGGCGATGCAGTGC
GACGTGAAAAGTTCGTTCGACTCCGTTTTCCGGCCTCCTTTTCCGTACAC
ACCATGTGTCGCTCGTTTGCCTTGGCTGGTGAGGGTTTGACAGCAATGTT
ACATTTAACCTCTCAGGCAGCAAAGTTGTTGCACTCCTTCGAGGGGGGTG
GGGGATATGGTGTGGTATCGTTTAGCCCCATGCACGTCGAATTGCGCGAC
TTTAGCTCCAGGCATGTTGTGCTCCTCACGCATAGTGCCTTTTCAGCGGT
GTGCATTGGTTCCTCGGAGCCGCCGGCACTCGTCTTGATTCCGCAACCGG
AAGTTCCGACGTGCCCCGCCGCTTTGCGGGAACTTGAAGCTTCAGTGAGG
AAACACCAGGACCTGAGTGCCCTGTTGCATGGTCTCTCACGAATTCTCCC
TGGTCTTGCGGTTGTAGCTAGGGTTGTGCCAGGAGTAGGACAAGGTATGG
ATACACCGCCCAGTCCTGACGACAACTTCGGGCTTGCAGCGTTGAGTCCG
GCGTGCTTTGTGTTGTCAGACCGTTCTGCACAAGCGACCCTCTATTTGGT
GGTGGAAGCAGCAGAGCGTGTCCGGGTATCCGGGCAAGCTGGGAAAGGCG
ACGTCTCCGTCGACGCATCTGGATTGCGAGATTTGTTGCTTGAATGGATC
GCACCATCTCGCGCGCAATCTGATGTGGTGTAAGTGCGGCGATGCCTGAT
GGAATGTTTGGCGCTCCTTCTTCGTGAAGAGGTCGAGACTGTTTGGCGCA
CTACGTTGGGGATGGTTCCCTGCCAGCGCTGGCAAGCTCTGCTGGGGCGT
GCAGATAATACAGCGTTGAGCGATTCGGGCTTGGACTTGTCTGTCCAAGA
TGGTTTTGGCACGTTAAGATCTTTCGTCTGTCTCGCCCAGTTTCGAGAGG
AGGGCGTAAAGCTGTCAGATGAATGGCGACGTAGACGAGTCAATGGCCGT
CTACGACGAAGAGGTCCGGGGGTGATCGAGCTGACAACTGCGGAGAGAGC
CGCGACACCGGGGCGAGTTCCCTTGACGGCGCCAGACGGTACCATACTGA
GCCAGGGCGTTGTAGACCCTCTGTCGGTCGCTTTAGGTTTGAGTACTGAT
TGGCATCAGGGCGACGAAGGTCTACCCGGACTTGTGGCCTCTCTAGCGGA
AATGTCGGACACGGAAGATGTGGATGCATCCACGTCGTTCATCCGAGCGA
AGGGCGGGTCTCGAGATTCACCAGGCGAAAAAGATGGGAACGTGTTACCC
GCGTGCGATGTGCTAGAGGACACAGGCGAGGAGATTTATTTTTTTCTGGA
GGTGGCAGTGACTGCGAGTATGAAGGTAAAGCACATGCTCATCGTGGCGT
CGCTATCGACGGCTGCGGGAGCATGTCCATCTCGTCGACCGAAGGTTAAT
GAGACGTACCACATACGACCTTCTTCATTGCAGCAATCGTCGTATGGTTC
GTATGGTTCGCTCGAAATAGCTTTGCTTCCGGCCGAGACAGTTGTGGGTA
CAGGCCTTATTGAGAGGGCATCGCTATTGGGGAAGCGTTCTGCGTCGGAC
TTACGTGCAAGCGATAGCAAACGGCGAAATGGTACCAACAACAACGCTAC
TCCTTTGTTACCTGACAGTAAGCCTTCCTACGATGGGTTACAGCCCCTTA
CCAAAAGAATGGCTTCCACTGCCTTCTTTGGAGGACTCGGTGCCGCATCT
GATTCAGAGTTATTCTGCTCACCAATTGACTCAACTGGTTCATTAGAAGC
TGTTCATGCTTACGAGGTGGCCCATCTAGGGAAATGTCTTATCCCGTACG
CGCGACTACAGCATGCCCTCACGAGAGTAGGCACAGGGATAGCCCTGGAC
CTACACAGCTTGACTCAACTTCCAAGCCCTCTCTGTGAAGTGTCGCATTG
CACGGTGCTTTTGGGTGGTGAGGAGGGATGGTCAAGTGCGCAGCTTGCGG
CGACTGCGGCGATTGTTCGTTTCCTTCCTGGACATAGCCAAGCGGATAGC
TGGGAGTGGAATGTGACCCTGAGCTCTGCGACGCAGCTGATGGATCACAC
TGTGCCCTGCGTTGAAAATACCAGCGAATATGGGGTTGTCCATGAACATT
TGTCATTGCTCGAAAACATGGAGATTGGATCCAAGTCTTCGGCCGTCGAG
GGTGAGGTCGAGATTCGAAAGAGAGGTTATGTATCAGTTGCAGGCGATGC
AGTGCGACGTGAAAAGTTCGTTCGACTCCGTTTTCCGGCCTCCTTTTCCG
TACACACCATGTGTCGCTCGTTTGCCTTGGCTGGTGAGGGTTTGACAGCA
ATGTTACATTTAACCTCTCAGGCAGCAAAGTTGTTGCACTCCTTCGAGGG
GGGTGGGGGATATGGTGTGGTATCGTTTAGCCCCATGCACGTCGAATTGC
GCGACTTTAGCTCCAGGCATGTTGTGCTCCTCACGCATAGTGCCTTTTCA
GCGGTGTGCATTGGTTCCTCGGAGCCGCCGGCACTCGTCTTGATTCCGCA
ACCGGAAGTTCCGACGTGCCCCGCCGCTTTGCGGGAACTTGAAGCTTCAG
TGAGGAAACACCAGGACCTGAGTGCCCTGTTGCATGGTCTCTCACGAATT
CTCCCTGGTCTTGCGGTTGTAGCTAGGGTTGTGCCAGGAGTAGGACAAGG
TATGGATACACCGCCCAGTCCTGACGACAACTTCGGGCTTGCAGCGTTGA
GTCCGGCGTGCTTTGTGTTGTCAGACCGTTCTGCACAAGCGACCCTCTAT
TTGGTGGTGGAAGCAGCAGAGCGTGTCCGGGTATCCGGGCAAGCTGGGAA
AGGCGACGTCTCCGTCGACGCATCTGGATTGCGAGATTTGTTGCTTGAAT
GGATCGCACCATCTCGCGCGCAATCTGATGTGGTGTAA