prot_H-paniculata_contig5231.12598.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI) HSP 1 Score: 926 bits (2394), Expect = 0.000e+0 Identity = 593/1236 (47.98%), Postives = 726/1236 (58.74%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTD-QAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVHPPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDRLSCGQMLLAAVRTLASHKILALATDLEEIAQQLRMDNDKSNPSVSVVNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGAQQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQRWQALLGRADNTALSDSGLDLSVQDGFGTLRSFVCLAQFREEGVKLSDEWRRRRVNGRLRRRGPGVIELTTAERAATPGRVPLTAPDGTILSQGVVDPLSVALGLSTDWHQGDEGLPG-LVASLAEMSDTED--VDASTSFIRAKGGSRDSPGEK---DGNVLPACDVLEDTGEEIYFFLEVAVTASMKVKHMLIVASLSTAAGACPSRRPKVNETYHIRPSSLQQSSYGSYGSLEIALLPAETVVGTGLIERASLLGKRSASDLRASDSKRRNGTNNNATPLLPDSKPSYDGLQPLTKRMASTAFFGGLGAASDSELFCSPIDSTGSLEAVHAYEVAHLGKCLIPYARLQHALTRVGTGIALDLHSLTQLPSPLCEVSHCTVLLGGEEGWSSAQLAATAAIVRFLPGHSQADSWEWNVTLSSATQLMDH--TVPCVENTSEY----GVVHEHLSLLENMEIGSKSSAVEGEVEIRKRGYVSVAGDAVRREKFVRLRFPASFSVHTMCRSFALAGEGLTAMLHLTSQAAKLLHSFEGGGGYGVVSFSPMHVELRDFSSRHVVLLTHSAFSAVCIGSSEPPALVLIPQPEVPTCPAALRELEASVRKHQDLSALLHGLSRILPGLAVVARVVPGVGQ--GMDTPPSPD-DNFGLAALSPACFVLS-----DRSAQA--TLYLVVEAAERVRVSGQAGKGDVSVDASGLRDLLLEWIA 1213
MHG LFGARQRLYDVPVAVDVL+ GRYP LPKGIEYCGGD+DPRPI+E+PANR+EI+ RVDRAIRLALLRRGG+P+ FTSH V++G L+L V GEFEL+VTLQAEREDA+W LLGV + +QAR+GE++TAP D RQQ YLHEV+QKAMDVH+ D + N LLAAYQVCHDLCCSM+L ILHAQAQKLATR+GGLWA QL V F KD +++ EF G G G DVG + D+E T A D +L +VQ++PD+LSC +MLLAA R AS K+ LA D+E A QL P V+ V G++ ICP+G G +E+SVDVKSGRYL++DTL K+MA C+SRL EALNLLP TD+QSL SI + LS GR V + A++G +QDLR Q VRRC+ E LL R E+E +R G+VP RWQALLGR D A+ D+G + DG TLRS V L QFRE GV LS+ WR+R N R+ RRG IELT AERAAT G+VP A G PL L S+ W QG LP L ASLAE+SD D ST + +G + G K +GNVL E+TGE + FFLEV +T ++ V+H ++ A+L TA A S RP V ETY + P Q S GSL+ LLP++ G KRSAS L A S+ G +DGL P T A G +G AS ++L C+ + +P+ARLQHAL RVGTG++LD LT +V HC V L GE GWSS ++AA++A V F PGH+QAD+WEW+VTL T LMD VP + G+VHE L L +++EI + +R+ G S + + + K VR RFP FSVH MCRSFALAGEGLT M L +QA+KL + GY VVS SP+HV +RD HVVLLTHSAFS+ I S++ P LVLIP P PTCPAA+RELEASVRKH+DL+ALLHGLSR +P LA V+RV+PGVG GM+ SP F L A++PA FVLS +R Q+ L L VEA +VRVS G+ DV D LR LLLEWIA
Sbjct: 113 MHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVLRVDRAIRLALLRRGGVPNQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWALLGVTLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDANPRPNALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQIVAALGPPGEFLEGR-GLGSDVGDHSVTTDEE---------------------------------------------------------------TSAVD--------------------SLLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQL----GACVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNG-EQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAI-DAGTEFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGSGANGVKASSEGNVL------EETGEVLSFFLEVDITGNLDVEHTVVSATLPTAGRARKSLRPVVGETYKLFPC--QPLSGSRCGSLDADLLPSKPPPAVGT--------KRSASCLDAGYSQGAIGITTGV----------HDGLCPTTLHAA----VGTVGEASQTQL-CTAVQMCNRF---------------VPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEDKGLAVTRGIVHEQLPLAQHIEI----------LGVRQEGIESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKLRQTGCEAAGYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHAPTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAAGMNGDRSPSRGEFVLTAVTPARFVLSKSPLGERRLQSKPALTLAVEAGGQVRVS-TPGRKDVVADTGALRRLLLEWIA 1201
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.570e-43 Identity = 165/601 (27.45%), Postives = 234/601 (38.94%), Query Frame = 0
Query: 3 GALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIY--EVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHS--------------------------------------------------------------TTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVH----PPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDRLSCGQMLLAAVRTLASHKILALATDLEEIAQQLRMDNDKSNPSVSV---VNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGAQQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQRWQALLGRADNTA 532
G LFGARQR +DVP A+DVL +G YP LP GI +CG D D + + P R ++ RVDRA+RLALL R P+ FTS AVR G L L V EFEL +TL+ E DA W L G+ +++ +R GEA+ PP D+RQ+ YL ++Q+A+D + ++ PLL AY++ HD C L +L QAQ LA R G W L+ D+ VLD+ +W++E+ L A R + G+ P P R++RVH D I + LG A + T A A+ + LS +++ AVRT K+ LA D+ + V G + + G G L+I+ D+++GR ++ + + + L EAL L P GR +AQ A +R LM L + + E LG+ P RW ALLGR +A
Sbjct: 116 GGLFGARQRPFDVPAALDVLGSGTYPRLPLGIPWCGMDQDESSLVPTDTPEQRASVLARVDRALRLALLVREPFPAGFTSRAVRRGCLYLEVAHEFELRLTLEGEGGDAPWVLRGLDIRVASRAGEAIAPPPVDLRQRVYLQNLLQRALDAAADSASPGGTAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMADASEVVPGRPLLTAYRLAHDFCMGAQLELLSVQAQALA-RPGAPWHGCLRAVLDRAARVLDIIVWEQEYGPALP-----------TAAPPPPRGAPVNGV-----------PPPAQGRFIRVHVQRPETADAEAHIRIQLGPG---------AAEAATEA---------------------------ALHIDAAALSASRLVRDAVRTFTRRKLAVLAPDVAAALRGAPAGGXXXXSGVRARLHAGGRALRVAARGGGALDIAADLRTGRCVVLSERAEARPDASGAHAALLEALALPPGA--------------AGRA----------HAQGRAM-------LRARLMAALRMAALDAAEAAAACGLGLEPQWRWGALLGRGGASA 626
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: M4BI28_HYAAE (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI28_HYAAE) HSP 1 Score: 102 bits (255), Expect = 2.680e-18 Identity = 138/577 (23.92%), Postives = 237/577 (41.07%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKI---QARQGEAVTAPPTDMR----------QQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQKEFSTGLAGTGRDVGVGGIRADDEMLRYQAITGIAAESTRAASLPPAPIGCRYMRVHPPVDRNGKIVVSLGTVGEWFQDRTFAGDDGTMADDGXXXXXXXVYNVSGKGRTTADVLVGAVQVHPDR--LSCGQMLLAAVRTLASHKILALATDL-----EEIAQQLRMDNDK-----SNPSVSVVNGVTVSICPFGNGCLEISVDVKSGRYLIQDTLSRKSKSMARCVSRLGEALNLLPPTDTQSLSASITAALSGGRLVPSIWRPSSNYAQDGA---QQDLRHQQVRRCLMECLALLLREEVETVWRTTLGMVPCQR----WQALL-------GRADNTALSDSGL 538
MH L A++R YD+ AVDVL G Y WLP I+ + PR + EV ++ +V IR L+ IP ++ + G ++ +GEFE+++TLQ E DAKW ++ V + QA A A + +R ++L +VQ+AM+ P + A+ V + C S+ L IL Q + L + G W N++ +T +D+ VLD+C W K + A T ++ Q ++ A + + +LP + + V D N K ++S+ N+ G L+ A++V + LS +L+AA+R S + ++ L EE A + +K S+ S+ + + F LEI+ D++ GR+++ + K ++ V +L L DTQ GG +V S + + DG ++ H VR+ L E +A +E+ + T G+ + W+ L G+ ++ +SD+ L
Sbjct: 102 MHADLNRAKERRYDLSTAVDVLYGGSYLWLPTIIKNA---MFPRELPEVEI--EQAATKVTDLIRFRLIE-AEIPDQVSNIKLEGGFVTCQAQGEFEIVLTLQGEENDAKWRVISVNTALTDPQAFGDHARAASTSALRIIRTNAPSAAHYNHLKNLVQRAMN-------KSEKPFVDAFVVMREFCSSLALQILALQGKLL---MEGRWKNRIMITHHRDQNVLDICYWPKACTRKEAQT----------LTEQQRLIQQLSEPLATARKGFTLPYSESS---LCVRLSFDPNKKKLLSVSL------------------------SPSLPPNLPGYA-----ALLSALEVPSNMFSLSAENLLIAAMRAHVSAALFSIGRLLVVGSPEETASTQLVTGEKVAMVCSDTSLRIARSDIGGLRQF----LEITFDIREGRFIVSSVAAAKHVTLYTSVKQLERIL------DTQCKIEL------GGNVVKSFPNDFALVSGDGKGNKSNEMIHASVRKVLCEIVA----DEIAQIGITFRGIEVLRNVNLNWERYLAFRQQQGGQTEDLTISDTAL 600
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A1V9ZMZ3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMZ3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.270e-17 Identity = 75/234 (32.05%), Postives = 111/234 (47.44%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAP--------------PTDMRQQSYLH--EVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLW-ANQLKVTFDKDKEVLDLCIW 217
+H L A++R YD+P AVDVL G Y LPK I Y + P+ + EV ++ I ++ IR L+ IPS+FT V G + V+GEFE++ TL + D+ W L+ + + + P PT++ Y+H +VQK M+ P +AA V D CCS+ L IL AQ Q L W + ++ + DK+VLD+C W
Sbjct: 101 LHADLNRAKERNYDLPTAVDVLYGGSYTRLPKIINYA---MHPKEMPEVDEDKA--IQEMEDIIRFRLIEEE-IPSTFTRIDVEGGFVVAQVDGEFEIVFTLNGKESDSLWRLVAINTVLTDLTAQEKYKPLASTNTLRIIKANAPTELH---YMHMRNLVQKCMN-------KSDKPFVAACDVMRDFCCSLSLQILVAQGQLLTD---ARWKGSNVEFIYHADKQVLDICYW 315
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A067CQG6_SAPPC (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQG6_SAPPC) HSP 1 Score: 99.0 bits (245), Expect = 3.860e-17 Identity = 74/231 (32.03%), Postives = 112/231 (48.48%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQ---ARQGEAVTAPPTDMR--------QQSYLH--EVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLW-ANQLKVTFDKDKEVLDLCIW 217
+H L A++R YD+ A+DVL G YP LPK I Y + P+ + +V ++ I +D IR L+ IPS+FT V G + VEGEFE++ TL + D+ W L+ + + A + A +R + Y+H +VQK M+ S P +AA + D CCS+ L IL AQ L W ++ ++ + DK+VLD+C W
Sbjct: 101 LHADLNRAKERTYDLATAIDVLYGGTYPRLPKLISYA---MHPKEMPDVDEDKA--IQEMDDIIRFRLIEEE-IPSTFTRIDVEGGFVIAHVEGEFEIVFTLNGKESDSLWRLVAINTVLTDAAATEKYKTLASTNTLRIIKANAPTELHYMHMRNLVQKCMNKSSA-------PFVAACDIMRDFCCSLSLQILVAQGHLLTD---SRWKSSNVEFVYHADKQVLDICYW 315
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A3M6VE54_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE54_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.830e-15 Identity = 74/232 (31.90%), Postives = 113/232 (48.71%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKI---QARQGEAVTAPPTDMR----------QQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIWQK 219
MH L A++R YD+ AVDVL G Y LP I+ + PR + EV N E V IR L+ IP ++ + G ++ VEGEFE+++T+Q + DAKW ++ V + +A + A A + +R ++L +VQ+AM+ P + A+ V C S+ L IL +Q KL T G W N++ + +D+ VLD+C W K
Sbjct: 102 MHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIIKNV---MFPRELPEV--NTDEAAMEVADIIRFRLIGEE-IPEQVSNIKLEGGFVTCQVEGEFEIVLTIQGKENDAKWRVISVITALTEPKAFEDHAQAASTSALRIIRTNSPSAAHYNHLKNLVQRAMN-------KSEKPFVDAFVVMRQFCSSLALQILASQG-KLLTE--GRWKNRIMIKHHRDQNVLDICYWPK 317
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: D8RD42_SELML (Mediator of RNA polymerase II transcription subunit 14 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RD42_SELML) HSP 1 Score: 82.4 bits (202), Expect = 5.420e-12 Identity = 61/203 (30.05%), Postives = 104/203 (51.23%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKV 203
+H +L +R +YDV A+DVL G +P +PK IE DL+ +P+ E + ++ ++D +R LL +P FTS +VRDG L+L V+GEFE+ +TL + W +L +K+ + GE+ Q+ L + +++ M A NP Y V H+ C ++++ L Q + L G W + +++
Sbjct: 98 LHESLQQSRAPMYDVASAMDVLFTGGFPRMPKCIE----DLNVQPVLE-GWKKDNVLQKLDTLLRSKLLDIA-VPKEFTSVSVRDGRLTLRVDGEFEVELTLGYRGNASLWRVLHLKLLV----GESSRPAKFSDMQRFALSDDLERRMS-------ALENPFGIIYTVLHEFCAALVMDTLWRQVRALRH---GRWKDAIRL 280
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: F0W2P3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2P3_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 2.340e-11 Identity = 68/231 (29.44%), Postives = 111/231 (48.05%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKV------KIQARQGEAV-------TAP-PTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKDKEVLDLCIW 217
MH L A++R+YD+ A+DVL G Y LP IE + PR P N + ++ IR L++ IP FTS ++ G + G+FE++ TLQ + DA W ++ V +Q Q + +AP PT Q +++ ++Q A++ H+ P L A+++ + C S+ L IL +QAQ L + G W ++L + + +LD W
Sbjct: 103 MHANLDRAKERMYDLSTAIDVLYKGSYLRLPSVIERA---MYPREF--PPHNLTKTADTLNNLIRYRLIQ-SNIPKQFTSISLDHGFVYFTCSGQFEIVFTLQGLQPDAVWHVVRVHTILTDVNALQQYQTHSSAFRIFQNSAPNPT---QYAHIRNLLQTALN-HA------EEPFLEAFKLMKEFCASLALHILRSQAQLL---LDGPWKHRLSTVYHRQGNMLDFMYW 314
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A830D088_9LAMI (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D088_9LAMI) HSP 1 Score: 79.3 bits (194), Expect = 4.820e-11 Identity = 59/208 (28.37%), Postives = 98/208 (47.12%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKD 208
MH L AR +YDVP A+++L+ G Y LPK IE G + PA +K ++ +R LL +P T V DG +SL V+GEF++LVTL + W +L +++ + R G + ++ L + +++ M A NP + Y + H+LC ++++ + Q Q L G W + ++ D
Sbjct: 102 MHEGLQQARAPIYDVPSAIEILLGGTYQRLPKCIEDVGTQSTLNEDQQGPALKK-----LETLVRSKLLEIS-LPKEITEIKVYDGVVSLRVDGEFKVLVTLGYRGHLSMWRILHLELLVGERSGPV----KLEESRRHVLGDDLERRM-------AASENPFMILYSILHELCVALIMDTVIRQVQALRQ---GRWRDAIRFELISD 289
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Match: A0A068UE38_COFCA (Mediator of RNA polymerase II transcription subunit 14 n=5 Tax=Coffea TaxID=13442 RepID=A0A068UE38_COFCA) HSP 1 Score: 79.0 bits (193), Expect = 6.320e-11 Identity = 61/208 (29.33%), Postives = 97/208 (46.63%), Query Frame = 0
Query: 1 MHGALFGARQRLYDVPVAVDVLVNGRYPWLPKGIEYCGGDLDPRPIYEVPANRKEIIPRVDRAIRLALLRRGGIPSSFTSHAVRDGALSLAVEGEFELLVTLQAEREDAKWTLLGVKVKIQARQGEAVTAPPTDMRQQSYLHEVVQKAMDVHSTTDQAKSNPLLAAYQVCHDLCCSMMLGILHAQAQKLATRIGGLWANQLKVTFDKD 208
MH L AR +YDVP AV+VL+NG Y LPK IE G + PA + ++D +R LL +P T + DG + L V+GEF++LVTL + W +L +++ + R G + Q+ L + +++ M A N + Y + H+LC ++++ + Q Q L G W + +K D
Sbjct: 101 MHEGLQQARAPIYDVPSAVEVLLNGTYHRLPKCIEDVGTQSTLNVDQQKPA-----LMKLDALVRSKLLEVS-LPKDITEVKISDGTVLLRVDGEFKVLVTLGYRGHLSLWRILHLELLVGERSGPV----KLEELQRHALGDDLERRM-------AAAENAFMTLYSILHELCVALVMDTVIRQVQALRQ---GRWKDAIKFELISD 288 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5231.12598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5231.12598.1 ID=prot_H-paniculata_contig5231.12598.1|Name=mRNA_H-paniculata_contig5231.12598.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1223bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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