prot_H-paniculata_contig5199.12546.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5199.12546.1
Unique Nameprot_H-paniculata_contig5199.12546.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length118
Homology
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BLAST of mRNA_H-paniculata_contig5199.12546.1 vs. uniprot
Match: A0A6H5JPI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.020e-11
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 0 
Query:    4 YKVGDDRVLYEGTILTSWWDKNVSNAPSPLAYNTDDSGSTLLSSLYCDD-SGGGEVH-TSDET--WGGYLPCSTGPQV----DEDTTQPPVIKLTKSNGATYLVVEENSNYPNFLYSVW 114
            Y++G+  ++   T+  SW  ++ S   S L Y+ D+ G  ++S + C   S  G ++ T++E+  WG    C +GP +      D   PPVI L  + G  YL+VEE S+YP+FLYSVW
Sbjct:  161 YRIGES-IIRGNTVFASWSPQS-SRIASGLFYDIDN-GQAIVSEIACSTPSRTGSLYITAEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW 276
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5199.12546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPI8_9PHAE6.020e-1136.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5199contigH-paniculata_contig5199:10055..13233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5199.12546.1mRNA_H-paniculata_contig5199.12546.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5199 10053..13233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5199.12546.1 ID=prot_H-paniculata_contig5199.12546.1|Name=mRNA_H-paniculata_contig5199.12546.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
NSRYKVGDDRVLYEGTILTSWWDKNVSNAPSPLAYNTDDSGSTLLSSLYC
DDSGGGEVHTSDETWGGYLPCSTGPQVDEDTTQPPVIKLTKSNGATYLVV
EENSNYPNFLYSVWKNTP
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