mRNA_H-paniculata_contig51753.12509.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 185 bits (470), Expect = 4.360e-50 Identity = 106/250 (42.40%), Postives = 141/250 (56.40%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W+ AM+EE + + GT+ ED LPAGR I KW+F +K EDG+++RYKARLVAQG+SQ+ G D+ ET APV + ++R +AA D E+ MDV AYLN +EEE+ ++ P + G V RLRK+LY LKQSGR WN D L I + D C+Y G T W E K + F +KDLG +++GIE++RDR NGTI++SQ YI VL R
Sbjct: 894 WKKAMDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYD---DGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTR 1137
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.630e-47 Identity = 103/237 (43.46%), Postives = 141/237 (59.49%), Query Frame = 1
Query: 4 RAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLF-SRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFP-ATMGERQTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
R A + E A + NGTWE L LP G + I + W+ K ++G + R KAR +A+G+SQ G D+L T APVA ++T+R V +LA D EL MDVD AYL + +EE++ +K PP + + S G V RLRKSLY LKQSGRNW+ +D + G S+TD CLY + GE + FKH IS+ F MKDL L +LG+ ++RDR + ISQ +YI +L +
Sbjct: 248 RKARDAEYQAHMKNGTWE---LTPLPKGERCISSGWVEADKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGEMEMV---NSFKHAISREFSMKDLKELHWILGMAIKRDREKRVMEISQTAYIDMMLAK 478
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A165UZ38_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165UZ38_9AGAM) HSP 1 Score: 168 bits (426), Expect = 2.280e-47 Identity = 99/251 (39.44%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFL-DGIELDRSTT----------DSCLYFPATMGER----QTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W A ++E +LV+NGT+E L P GRKAI ++W+FK K DGS+ RYK RLVA+GFSQ G D+ ET AP ++LR + +LAA D EL+ +D+ AYLN +EE++ ++ P F +G +V RL+K LY LKQ+GR+W+ L++ L + + R T D C+ P + + ++ + K ++ Q F+++DLG S +LG+E++RDR + T+TISQ YI ++L R
Sbjct: 57 WLKAAQDEIQSLVENGTFE---LVECPPGRKAIGSRWVFKVKRNADGSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASLRAILALAALEDLELESVDISTAYLNGTLEEDVYMRQPKGFE--QKGPEWVWRLQKLLYGLKQAGRHWHEKLNEVLTEKLGFSRLTCEHSVWVYGKDDVCIIIPVFVDDMTIASKSSAAIQKVKDDLRQHFKLRDLGPTSWLLGVEIKRDRSSRTLTISQRQYILDILSR 302
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.520e-47 Identity = 102/256 (39.84%), Postives = 151/256 (58.98%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSR-GIPF-VRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFP------------------ATMGERQTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W+ A E E +L+DN TW D+ LP GRKAI KW+FK K K DGS+ +YKARLVA+G+SQ G D+ ET PVA +++R + SLAA+H+ EL+ MDV+ A+LN+ ++E++ +++P + G+ V +L+KSLY LKQ+ R WN T+D F+ I +S D C+Y A+ + K +S+RF+M DLG LS LGIE+ R P+G++ I Q +++ VL +
Sbjct: 60 WKDACESEIKSLLDNKTW---DVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQDEDIILVSLYVDDLILASNSDEMM----QTTKIALSKRFKMTDLGPLSYCLGIEIVRS-PSGSVFIHQSKFLKSVLTK 307
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY) HSP 1 Score: 164 bits (416), Expect = 4.350e-47 Identity = 93/234 (39.74%), Postives = 130/234 (55.56%), Query Frame = 1
Query: 46 GTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLK 705
GTWE +D LP R A+ KW+F++K ++G V +YKARLVAQG+SQ+ G DFLET APV + ++R + +LA +++E+ MDV AYLN ++EE+ ++ P F+ G V RL K+LY LKQSG WN L L + + D C+Y GE Q T W E K ++ F + DLG +++G E+ RDR G I I Q YI +LK
Sbjct: 2 GTWELQD---LPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFN---DGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEIERDREAGKIQILQQHYIESILK 229
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 176 bits (445), Expect = 9.820e-47 Identity = 103/251 (41.04%), Postives = 141/251 (56.18%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLY-FPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W A++ E L GTWE +D LP R A+ KW+F+RK ++G V +YKARLVAQG+SQ+ G DFLET APV + ++R + +LA +++E+ MDV AYLN ++EE+ ++ P F G + RLRK+LY LKQSGR WN L L + R D C+Y + GE Q T W E K ++ F + DLG +++GIE+ RDR G I ISQ YI +LKR
Sbjct: 922 WEKAVKAEYDQLQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFD---DGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKR 1166
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3) HSP 1 Score: 172 bits (437), Expect = 1.140e-45 Identity = 100/250 (40.00%), Postives = 136/250 (54.40%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W A+ EE L TWE +D LP RKAI +W+F RK E+G + RYKARLVAQGFSQ+ G DF T APV +LR + ++AA + E++ +DV AYLN + EE+ ++ P F G V RL+K+LY LKQSGR WN LD L + +S D C+Y G T W E K + + F + DLG ++G+EV+RDR TI++ Q SY+ +LK+
Sbjct: 743 WEKAINEEYSLLEGMETWELDD---LPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFH---DGTSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYIRTENGHTSYITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKK 986
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 167 bits (424), Expect = 2.010e-45 Identity = 98/251 (39.04%), Postives = 144/251 (57.37%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQTFWWPY---------------EFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W+AAM++E +L +NGTW+ D LP GRKA+ KWIFKRKL EDG+V RYKARLVAQGF+Q G D+ E APV T R + ++A++ +K DV AYLN +EE + ++ PP + +R V L+KSLY LKQ+G WN D L ++ +S D CLY G+ T+ Y E +++ F++ LG +S LGI++ R+ ++SQ +YI+++L++
Sbjct: 9 WKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRN-GKGYTYLVIYVDDMVIACNDDEEYEEIIKTLNRHFKVTSLGDISHFLGIKINRNEKG--FSLSQQTYIKQILEQ 251
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 166 bits (420), Expect = 4.200e-45 Identity = 99/235 (42.13%), Postives = 130/235 (55.32%), Query Frame = 1
Query: 46 GTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
GT+ ED LPAGR I KW+F +K EDG+++RYKARLVAQG+SQ+ G D+ ET APV + ++ +AA D E+ MDV AYLN +EEE+ ++ P + G V RLRK+LY LKQSG WN D L I + D C+Y G T W E K + F +KDLG +++GIE++RDR NGTI++SQ YI VL R
Sbjct: 2 GTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYD---DGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTR 230
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A401H727_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H727_9APHY) HSP 1 Score: 170 bits (431), Expect = 6.860e-45 Identity = 101/251 (40.24%), Postives = 140/251 (55.78%), Query Frame = 1
Query: 1 WRAAMEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLY-FPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 708
W A++ E L GTWE +D LP R A+ KW+F+RK ++ V +YKARLVAQG+SQ+ G DFLET APV + ++R + +LA +++E+ MDV AYLN ++EE+ ++ P F G + RLRK+LY LKQSG WN L L + R D C+Y + GE Q T W E K ++ F + DLG +++GIE+ RDR GT+ ISQ YI +LKR
Sbjct: 727 WEKAVKAEYDQLQGMGTWELQD---LPKYRNAVGCKWVFQRKTNKESQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFD---DGSGRICRLRKTLYGLKQSGCKWNRKLHRELMELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGTLQISQQHYIESILKR 971 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig51753.12509.1 >prot_H-paniculata_contig51753.12509.1 ID=prot_H-paniculata_contig51753.12509.1|Name=mRNA_H-paniculata_contig51753.12509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp MEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKAback to top mRNA from alignment at H-paniculata_contig51753:498..1252- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig51753.12509.1 ID=mRNA_H-paniculata_contig51753.12509.1|Name=mRNA_H-paniculata_contig51753.12509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=755bp|location=Sequence derived from alignment at H-paniculata_contig51753:498..1252- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig51753:498..1252- >mRNA_H-paniculata_contig51753.12509.1 ID=mRNA_H-paniculata_contig51753.12509.1|Name=mRNA_H-paniculata_contig51753.12509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1398bp|location=Sequence derived from alignment at H-paniculata_contig51753:498..1252- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |