prot_H-paniculata_contig51753.12509.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig51753.12509.1
Unique Nameprot_H-paniculata_contig51753.12509.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length233
Homology
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 179 bits (454), Expect = 5.300e-48
Identity = 104/246 (42.28%), Postives = 138/246 (56.10%), Query Frame = 0
Query:    1 MEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            M+EE   + + GT+  ED   LPAGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D+ ET APV  + ++R    +AA  D E+  MDV  AYLN  +EEE+ ++ P  +     G   V RLRK+LY LKQSGR WN   D  L  I   +   D C+Y     G     T W               E K  +   F +KDLG   +++GIE++RDR NGTI++SQ  YI  VL R
Sbjct:  898 MDEEMSVIKEMGTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYTETFAPVVRLESVRAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYD---DGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTR 1137          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY)

HSP 1 Score: 164 bits (416), Expect = 3.810e-47
Identity = 93/234 (39.74%), Postives = 130/234 (55.56%), Query Frame = 0
Query:   12 GTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLK 231
            GTWE +D   LP  R A+  KW+F++K  ++G V +YKARLVAQG+SQ+ G DFLET APV  + ++R + +LA  +++E+  MDV  AYLN  ++EE+ ++ P  F+    G   V RL K+LY LKQSG  WN  L   L  +   +   D C+Y     GE Q  T W               E K ++   F + DLG   +++G E+ RDR  G I I Q  YI  +LK
Sbjct:    2 GTWELQD---LPKDRNAVGCKWVFQKKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVHLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFN---DGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEIERDREAGKIQILQQHYIESILK 229          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA)

HSP 1 Score: 174 bits (441), Expect = 9.840e-47
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 0
Query:    7 ALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLF-SRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFP-ATMGERQTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            A + NGTWE   L  LP G + I + W+   K  ++G + R KAR +A+G+SQ  G D+L T APVA ++T+R V +LA   D EL  MDVD AYL + +EE++ +K PP +  + S G   V RLRKSLY LKQSGRNW+  +D +  G     S+TD CLY    + GE +       FKH IS+ F MKDL  L  +LG+ ++RDR    + ISQ +YI  +L +
Sbjct:  257 AHMKNGTWE---LTPLPKGERCISSGWVEADKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSTDPCLYVKFGSSGEMEMV---NSFKHAISREFSMKDLKELHWILGMAIKRDREKRVMEISQTAYIDMMLAK 478          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A165UZ38_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165UZ38_9AGAM)

HSP 1 Score: 164 bits (414), Expect = 1.230e-45
Identity = 96/241 (39.83%), Postives = 146/241 (60.58%), Query Frame = 0
Query:    7 ALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFL-DGIELDRSTT----------DSCLYFPATMGER----QTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            +LV+NGT+E   L   P GRKAI ++W+FK K   DGS+ RYK RLVA+GFSQ  G D+ ET AP    ++LR + +LAA  D EL+ +D+  AYLN  +EE++ ++ P  F    +G  +V RL+K LY LKQ+GR+W+  L++ L + +   R T           D C+  P  + +     ++     + K ++ Q F+++DLG  S +LG+E++RDR + T+TISQ  YI ++L R
Sbjct:   67 SLVENGTFE---LVECPPGRKAIGSRWVFKVKRNADGSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASLRAILALAALEDLELESVDISTAYLNGTLEEDVYMRQPKGFE--QKGPEWVWRLQKLLYGLKQAGRHWHEKLNEVLTEKLGFSRLTCEHSVWVYGKDDVCIIIPVFVDDMTIASKSSAAIQKVKDDLRQHFKLRDLGPTSWLLGVEIKRDRSSRTLTISQRQYILDILSR 302          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 166 bits (420), Expect = 3.670e-45
Identity = 99/235 (42.13%), Postives = 130/235 (55.32%), Query Frame = 0
Query:   12 GTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            GT+  ED   LPAGR  I  KW+F +K  EDG+++RYKARLVAQG+SQ+ G D+ ET APV  + ++     +AA  D E+  MDV  AYLN  +EEE+ ++ P  +     G   V RLRK+LY LKQSG  WN   D  L  I   +   D C+Y     G     T W               E K  +   F +KDLG   +++GIE++RDR NGTI++SQ  YI  VL R
Sbjct:    2 GTYTKED---LPAGRDTIGCKWVFLKKYDEDGNISRYKARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYD---DGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMTIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTR 230          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 171 bits (432), Expect = 4.730e-45
Identity = 100/240 (41.67%), Postives = 136/240 (56.67%), Query Frame = 0
Query:    8 LVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLY-FPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            L   GTWE +D   LP  R A+  KW+F+RK  ++G V +YKARLVAQG+SQ+ G DFLET APV  + ++R + +LA  +++E+  MDV  AYLN  ++EE+ ++ P  F     G   + RLRK+LY LKQSGR WN  L   L  +   R   D C+Y +    GE Q  T W               E K ++   F + DLG   +++GIE+ RDR  G I ISQ  YI  +LKR
Sbjct:  933 LQGMGTWELQD---LPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFD---DGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWERKEGEVQIITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIVGIEIERDREAGKIQISQQHYIESILKR 1166          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.320e-45
Identity = 100/251 (39.84%), Postives = 148/251 (58.96%), Query Frame = 0
Query:    2 EEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSR-GIPF-VRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFP------------------ATMGERQTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            E E  +L+DN TW   D+  LP GRKAI  KW+FK K K DGS+ +YKARLVA+G+SQ  G D+ ET  PVA  +++R + SLAA+H+ EL+ MDV+ A+LN+ ++E++ +++P   +     G+   V +L+KSLY LKQ+ R WN T+D F+  I   +S  D C+Y                    A+  +          K  +S+RF+M DLG LS  LGIE+ R  P+G++ I Q  +++ VL +
Sbjct:   65 ESEIKSLLDNKTW---DVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKPVLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQDEDIILVSLYVDDLILASNSDEMM----QTTKIALSKRFKMTDLGPLSYCLGIEIVRS-PSGSVFIHQSKFLKSVLTK 307          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A438G5R6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G5R6_VITVI)

HSP 1 Score: 159 bits (402), Expect = 4.030e-44
Identity = 94/247 (38.06%), Postives = 137/247 (55.47%), Query Frame = 0
Query:    1 MEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQTFWWPY---------------EFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            M++E  ++  N  W   DL  LP G K I  KW+FK K    G++ RYKARLVA+GF+Q EG D+ ET +P++   +LR + +L A  D EL+ MDV  A+LN  +EEE+ +K P  F   S G   V +L+KS+Y LKQ+ R W     + +       +  D C+Y   + G +  F   Y               E K  +S+ F MKD+G  S V+GI++ RDR  G + +SQ++YI +VL+R
Sbjct:    1 MKDEMSSMKCNDVW---DLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPISKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPS-SDGEQLVCKLKKSIYGLKQASRQWYLKFHNIISSFSFVENVMDQCIYLKVS-GSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLER 242          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 162 bits (410), Expect = 7.250e-44
Identity = 98/243 (40.33%), Postives = 135/243 (55.56%), Query Frame = 0
Query:    9 VDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLF-SRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFP------------------ATMGERQTFWWPYEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            + NGTWE   L  LP G + I + W+   K  ++G + R KAR +A+G+SQ  G D+L T APVA ++T+R V +LA   D EL  MDV+ AYL + +EE++ VK PP +  + S G   V RLRKSLY LKQSGRNW+  +D +  G     S+ D CLY                     T   R+      +FKH IS+ F MKDL  L  +LG+ ++RDR    + ISQ +YI  +L +
Sbjct:    1 MKNGTWE---LTPLPKGERCISSGWVETDKRDQNGVIVRRKARFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEILVIVLYVDDLIITSNSREMVG---KFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMMLAK 237          
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Match: A0A067T5Q4_GALM3 (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Galerina marginata (strain CBS 339.88) TaxID=685588 RepID=A0A067T5Q4_GALM3)

HSP 1 Score: 167 bits (423), Expect = 7.460e-44
Identity = 98/246 (39.84%), Postives = 134/246 (54.47%), Query Frame = 0
Query:    1 MEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAAYLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLDDFLDGIELDRSTTDSCLYFPATMGERQ--TFWWP------------YEFKHNISQRFRMKDLGSLSRVLGIEVRRDRPNGTITISQDSYIREVLKR 232
            + EE   L    TWE +D   LP  RKAI  +W+F RK  E+G + RYKARLVAQGFSQ+ G DF  T APV    +LR + ++AA  + E++ +DV  AYLN  + EE+ ++ P  F     G   V RL+K+LY LKQSGR WN  LD  L  +   +S  D C+Y     G     T W               E K  + + F + DLG    ++G+EV+RDR   TI++ Q SY+  +LK+
Sbjct:  747 INEEYSLLEGMETWELDD---LPPERKAIGCRWVFLRKYNENGEIIRYKARLVAQGFSQIPGMDFDGTFAPVMRHDSLRALLAIAAIKNLEIQQLDVKGAYLNGDLREEIFMRQPDGFH---DGTSKVCRLKKTLYGLKQSGREWNRKLDKVLTELRFSKSNVDHCVYIRTENGHTSYITVWVDDLMIFTDKSDEMNEIKAYLKKEFEISDLGEPKLIIGLEVKRDRKKHTISLGQTSYVDRILKK 986          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig51753.12509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284QR88_ARMOS5.300e-4842.28Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A401GXA0_9APHY3.810e-4739.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7T0D1_9STRA9.840e-4743.86Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
A0A165UZ38_9AGAM1.230e-4539.83Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A284R853_ARMOS3.670e-4542.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401GYH9_9APHY4.730e-4541.67Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A6G0WHK2_9STRA5.320e-4539.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438G5R6_VITVI4.030e-4438.06Retrovirus-related Pol polyprotein from transposon... [more]
W7TCB8_9STRA7.250e-4440.33Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
A0A067T5Q4_GALM37.460e-4439.84Integrase catalytic domain-containing protein (Fra... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 184..231
e-value: 8.9E-7
score: 28.8
coord: 19..171
e-value: 1.5E-39
score: 136.1
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..151
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig51753contigH-paniculata_contig51753:498..1240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig51753.12509.1mRNA_H-paniculata_contig51753.12509.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig51753 498..1252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig51753.12509.1 ID=prot_H-paniculata_contig51753.12509.1|Name=mRNA_H-paniculata_contig51753.12509.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=233bp
MEEERGALVDNGTWESEDLGRLPAGRKAIRTKWIFKRKLKEDGSVARYKA
RLVAQGFSQVEGKDFLETSAPVACMSTLRTVFSLAAEHDFELKGMDVDAA
YLNAPVEEELLVKLPPEFSLFSRGIPFVRRLRKSLYSLKQSGRNWNNTLD
DFLDGIELDRSTTDSCLYFPATMGERQTFWWPYEFKHNISQRFRMKDLGS
LSRVLGIEVRRDRPNGTITISQDSYIREVLKR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like