mRNA_H-paniculata_contig5171.12502.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5171.12502.1
Unique NamemRNA_H-paniculata_contig5171.12502.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 134 bits (338), Expect = 1.070e-33
Identity = 84/234 (35.90%), Postives = 123/234 (52.56%), Query Frame = 1
Query:   16 IVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            I+ VYVDDL+I  R + ++ E K  + R F IK L  L   LGIE+ R+  + TI ++Q  Y++ + +++G ++C++V TP     K++ P   +      P                          R  VG+LMY  T TRPDIA AV + A+  E   +      KRI     T  +LG+ F G + G+ L G+ DA WA D++ R+STTGYVF L+GSAI W S++Q  V
Sbjct:   88 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPY-------------------------RELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTV 295          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 1.290e-33
Identity = 87/234 (37.18%), Postives = 127/234 (54.27%), Query Frame = 1
Query:   16 IVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            I+ VYVDDL+I  R + ++ E K  + R F IK L  L   LGIE+ R+  + TI ++Q  Y++ + + +G ++C++V TP     K++ P S D+   P+     L                        VG+LMY  T TRPDIA AV + A+  E   +      KRI     T P+LG+ F G + G+ L G+ DA+WA D++ R+STTGYVF L+GSAI W S++Q  V
Sbjct:  857 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPRYPYREL------------------------VGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTV 1064          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 132 bits (333), Expect = 3.780e-33
Identity = 78/234 (33.33%), Postives = 129/234 (55.13%), Query Frame = 1
Query:   16 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +  + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E +  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:   63 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AMEDSELFNKE----------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 268          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 136 bits (343), Expect = 4.600e-33
Identity = 87/238 (36.55%), Postives = 120/238 (50.42%), Query Frame = 1
Query:    1 GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            GE+ IIVA  VDDL I G  + VD F  +I +RF +  L  L  +LGIEVRRD    TI+ISQ  Y+  ++ R+  DE   +  P++    +   +S   P + + +  V                      R  VGSLMY    TRPDI +AV   ++ M++  R      KR+        EL + +G  +N +GL G+ DADW    E R S +GYVF LDG AI W S+KQ +V
Sbjct: 1217 GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDV--------------------PYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVV 1432          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 135 bits (340), Expect = 6.980e-33
Identity = 79/234 (33.76%), Postives = 131/234 (55.98%), Query Frame = 1
Query:   16 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +A + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E++  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:  338 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AMEDSELFNKE----------EHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 543          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 135 bits (341), Expect = 8.470e-33
Identity = 87/238 (36.55%), Postives = 123/238 (51.68%), Query Frame = 1
Query:    1 GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            G++ +IVA  VD L IAG R+ V +FK  IS RF +  L ++  +LGIEV+RD    TI+ISQ  Y+  V  R+  +    V TP++    +   +S   P +   +  V                      R  VGSLMY +  TRPDIA+AV   ++ M++  R      KR+        EL + +G  ++ DG++GF DADW    E R S +GYVF LDG AI W S+KQ +V
Sbjct: 1151 GDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNV--------------------PYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYG--TSDDGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVV 1366          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 134 bits (337), Expect = 2.840e-32
Identity = 79/234 (33.76%), Postives = 130/234 (55.56%), Query Frame = 1
Query:   16 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +A + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E +  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:  952 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AIEDSELFNKE----------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 1157          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 133 bits (334), Expect = 7.310e-32
Identity = 84/240 (35.00%), Postives = 125/240 (52.08%), Query Frame = 1
Query:   13 IIVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKI--LAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITF---GGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            +I+A+YVDD++IAG  R  +D FK  +S RF +  L S   +LG+E+ RD    T+SISQ  Y+ ++L+R+G   CR V TP++  LK+  L+  + D    PKP  + L                         GSLMY +  +RPD+A+AV   ++       +      R+F       +L +++      SNG    G+ DADWA DV DR+ST+G  F L G A+ W S+KQQ +
Sbjct: 1178 LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATID----PKPYQSAL-------------------------GSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSI 1388          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: UPI0018A7F043 (secreted RxLR effector protein 161-like n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A7F043)

HSP 1 Score: 124 bits (311), Expect = 2.290e-31
Identity = 75/234 (32.05%), Postives = 123/234 (52.56%), Query Frame = 1
Query:   16 IVAVYVDDLVIA-GRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            ++A+YVDDL++A   ++K +E K  +S+ F +K L  L+  LGIE ++D     I++SQ  Y++ +LK++  ++C+   TP    +K+            K + A   +    EK             +  VGSLMY    TRPDIA+ V   ++   +  +E     KR+       P +G+ +  +   + L G+ DADW  +++DR+S TGY+FKL  +AI W SRKQ+ V
Sbjct:   10 LLAIYVDDLIVATNNKQKWEELKLELSKSFEMKDLGQLNFCLGIEFKQDEKTKEITMSQRKYIQNILKKFNMEDCKPARTPFNTGIKLS-----------KEMCATEEEKSEVEKI----------PYQNLVGSLMYLAVSTRPDIAHIVSVLSQYNTNYGKEHWIAAKRVLRYLKGTPNIGLHY--RRTNEQLTGYADADWGANIDDRRSYTGYIFKLANAAISWESRKQRTV 220          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3H910_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H910_PHYRM)

HSP 1 Score: 125 bits (314), Expect = 2.760e-31
Identity = 76/239 (31.80%), Postives = 122/239 (51.05%), Query Frame = 1
Query:    1 GETNIIVAVYVDDLVIAGRREKV-DEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 714
            G+  I VA+YVDDLV+A   +++ +  KH + +RF +  L  L   LG+E++ DH +  +++ Q  +++ +L ++G  + + V TP    LK+      D        G    DT              +   R  VG+LMY +  TRPD+A AV   ++   D C       KR+       P  G+ F  +++  G+ G+ DADWA D+E R+ST+GY F ++G  I W S+KQ+ V
Sbjct:   61 GQDMIFVALYVDDLVLASSNDELLESTKHALCKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCED--------GCQHEDTMK------------NVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREASL-GMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTV 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB17_PHYRM1.070e-3335.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7M7_PHYRM1.290e-3337.18CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A7D9M6E1_PARCT3.780e-3333.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY4.600e-3336.55Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A7D9HZ03_PARCT6.980e-3333.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S825_PYCCI8.470e-3336.55CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A6S7HEL0_PARCT2.840e-3233.76Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1M2VV58_TRAPU7.310e-3235.00Retrovirus-related Pol polyprotein from transposon... [more]
UPI0018A7F0432.290e-3132.05secreted RxLR effector protein 161-like n=1 Tax=Lu... [more]
H3H910_PHYRM2.760e-3131.80Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5171contigH-paniculata_contig5171:6161..6874 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.7
Seed ortholog evalue4.5e-28
Seed eggNOG ortholog164328.Phyra71619
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs3QHW0@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930510.4989655-CDS-H-paniculata_contig5171:6160..68741622930510.4989655-CDS-H-paniculata_contig5171:6160..6874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5171 6161..6874 +
1691481325.0483732-CDS-H-paniculata_contig5171:6160..68741691481325.0483732-CDS-H-paniculata_contig5171:6160..6874Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5171 6161..6874 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5171.12502.1prot_H-paniculata_contig5171.12502.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5171 6161..6874 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5171.12502.1

>prot_H-paniculata_contig5171.12502.1 ID=prot_H-paniculata_contig5171.12502.1|Name=mRNA_H-paniculata_contig5171.12502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEV
RRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADK
PPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDI
AYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEG
FVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV
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mRNA from alignment at H-paniculata_contig5171:6161..6874+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5171.12502.1 ID=mRNA_H-paniculata_contig5171.12502.1|Name=mRNA_H-paniculata_contig5171.12502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=714bp|location=Sequence derived from alignment at H-paniculata_contig5171:6161..6874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAACAAACATTATCGTGGCCGTCTATGTTGACGACTTGGTCATCGC TGGACGTCGTGAGAAAGTAGACGAGTTCAAGCACAACATAAGTCGGCGAT TCAGGATAAAATACTTGAGCTCCCTCTCGTGCGTGTTGGGAATAGAAGTA CGACGTGACCACCCCAATGCTACCATATCAATATCCCAAGGTGGCTACAT GCGCGAGGTACTGAAAAGATACGGTTTTGACGAGTGTCGAAGTGTGCCAA CCCCTGTAAAGGGAAAATTGAAGATTTTGGCACCCGAGTCGGCCGATAAG CCCCCCGAACCAAAACCACTTGGGGCTGTACTGTCCGACACAGGCGCAGG AGAAAAAGAGAGCAGCAGTGGGAGAAGTGGCAATTCATCTGAAAACAGAG GTAAGGTAGGATCACTCATGTACACCTTGACAGAAACTAGACCTGATATA GCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACTCGTGTCGGGA AGACTTGAGTACATGCAAGCGCATTTTTCATTCTTTCAGTACTGTGCCTG AACTCGGCATTACGTTCGGCGGAAAGAGTAATGGTGACGGTCTGGAAGGA TTCGTTGACGCGGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAAC AGGATACGTATTCAAGCTGGACGGTAGTGCGATACGTTGGTGCTCTAGAA AGCAGCAGTTAGTC
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Coding sequence (CDS) from alignment at H-paniculata_contig5171:6161..6874+

>mRNA_H-paniculata_contig5171.12502.1 ID=mRNA_H-paniculata_contig5171.12502.1|Name=mRNA_H-paniculata_contig5171.12502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at H-paniculata_contig5171:6161..6874+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGAGAAACAAACATTATCGTGGCCGTCTATGTTGACGACTTGGTCATCGC
TGGACGTCGTGAGAAAGTAGACGAGTTCAAGCACAACATAAGTCGGCGAT
TCAGGATAAAATACTTGAGCTCCCTCTCGTGCGTGTTGGGAATAGAAGTA
CGACGTGACCACCCCAATGCTACCATATCAATATCCCAAGGTGGCTACAT
GCGCGAGGTACTGAAAAGATACGGTTTTGACGAGTGTCGAAGTGTGCCAA
CCCCTGTAAAGGGAAAATTGAAGATTTTGGCACCCGAGTCGGCCGATAAG
CCCCCCGAACCAAAACCACTTGGGGCTGTACTGTCCGACACAGGCGCAGG
AGAAAAAGAGAGCAGCAGTGGGAGAAGTGGCAATTCATCTGAAAACAGAG
GTAAGGTAGGATCACTCATGTACACCTTGACAGAAACTAGACCTGATATA
GCATACGCGGTACACCAAGCAGCACGTCGTATGGAGGACTCGTGTCGGGA
AGACTTGAGTACATGCAAGCGCATTTTTCATTCTTTCAGTACTGTGCCTG
AACTCGGCATTACGTTCGGCGGAAAGAGTAATGGTGACGGTCTGGAAGGA
TTCGTTGACGCGGATTGGGCGGAAGATGTCGAGGACCGAAAGTCCACAAC
AGGATACGTATTCAAGCTGGACGGTAGTGCGATACGTTGGTGCTCTAGAA
AGCAGCAGTTAGTCGGAGAAACAAACATTATCGTGGCCGTCTATGTTGAC
GACTTGGTCATCGCTGGACGTCGTGAGAAAGTAGACGAGTTCAAGCACAA
CATAAGTCGGCGATTCAGGATAAAATACTTGAGCTCCCTCTCGTGCGTGT
TGGGAATAGAAGTACGACGTGACCACCCCAATGCTACCATATCAATATCC
CAAGGTGGCTACATGCGCGAGGTACTGAAAAGATACGGTTTTGACGAGTG
TCGAAGTGTGCCAACCCCTGTAAAGGGAAAATTGAAGATTTTGGCACCCG
AGTCGGCCGATAAGCCCCCCGAACCAAAACCACTTGGGGCTGTACTGTCC
GACACAGGCGCAGGAGAAAAAGAGAGCAGCAGTGGGAGAAGTGGCAATTC
ATCTGAAAACAGAGGTAAGGTAGGATCACTCATGTACACCTTGACAGAAA
CTAGACCTGATATAGCATACGCGGTACACCAAGCAGCACGTCGTATGGAG
GACTCGTGTCGGGAAGACTTGAGTACATGCAAGCGCATTTTTCATTCTTT
CAGTACTGTGCCTGAACTCGGCATTACGTTCGGCGGAAAGAGTAATGGTG
ACGGTCTGGAAGGATTCGTTGACGCGGATTGGGCGGAAGATGTCGAGGAC
CGAAAGTCCACAACAGGATACGTATTCAAGCTGGACGGTAGTGCGATACG
TTGGTGCTCTAGAAAGCAGCAGTTAGTC
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