prot_H-paniculata_contig5171.12502.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5171.12502.1
Unique Nameprot_H-paniculata_contig5171.12502.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 134 bits (338), Expect = 1.070e-33
Identity = 84/234 (35.90%), Postives = 123/234 (52.56%), Query Frame = 0
Query:    6 IVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            I+ VYVDDL+I  R + ++ E K  + R F IK L  L   LGIE+ R+  + TI ++Q  Y++ + +++G ++C++V TP     K++ P   +      P                          R  VG+LMY  T TRPDIA AV + A+  E   +      KRI     T  +LG+ F G + G+ L G+ DA WA D++ R+STTGYVF L+GSAI W S++Q  V
Sbjct:   88 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLVKPAEDEVFVPRYPY-------------------------RELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADASWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTV 295          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 138 bits (347), Expect = 1.290e-33
Identity = 87/234 (37.18%), Postives = 127/234 (54.27%), Query Frame = 0
Query:    6 IVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            I+ VYVDDL+I  R + ++ E K  + R F IK L  L   LGIE+ R+  + TI ++Q  Y++ + + +G ++C++V TP     K++ P S D+   P+     L                        VG+LMY  T TRPDIA AV + A+  E   +      KRI     T P+LG+ F G + G+ L G+ DA+WA D++ R+STTGYVF L+GSAI W S++Q  V
Sbjct:  857 IIIVYVDDLMIFSRTKAEIGEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLVKP-SEDEDFVPRYPYREL------------------------VGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTPDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTV 1064          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 132 bits (333), Expect = 3.780e-33
Identity = 78/234 (33.33%), Postives = 129/234 (55.13%), Query Frame = 0
Query:    6 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +  + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E +  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:   63 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DGKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AMEDSELFNKE----------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 268          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 136 bits (343), Expect = 4.600e-33
Identity = 87/238 (36.55%), Postives = 120/238 (50.42%), Query Frame = 0
Query:    1 GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            GE+ IIVA  VDDL I G  + VD F  +I +RF +  L  L  +LGIEVRRD    TI+ISQ  Y+  ++ R+  DE   +  P++    +   +S   P + + +  V                      R  VGSLMY    TRPDI +AV   ++ M++  R      KR+        EL + +G  +N +GL G+ DADW    E R S +GYVF LDG AI W S+KQ +V
Sbjct: 1217 GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDV--------------------PYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYG--TNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVV 1432          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 135 bits (340), Expect = 6.980e-33
Identity = 79/234 (33.76%), Postives = 131/234 (55.98%), Query Frame = 0
Query:    6 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +A + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E++  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:  338 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AMEDSELFNKE----------EHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 543          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A060S825_PYCCI (CCHC-type domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060S825_PYCCI)

HSP 1 Score: 135 bits (341), Expect = 8.470e-33
Identity = 87/238 (36.55%), Postives = 123/238 (51.68%), Query Frame = 0
Query:    1 GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            G++ +IVA  VD L IAG R+ V +FK  IS RF +  L ++  +LGIEV+RD    TI+ISQ  Y+  V  R+  +    V TP++    +   +S   P +   +  V                      R  VGSLMY +  TRPDIA+AV   ++ M++  R      KR+        EL + +G  ++ DG++GF DADW    E R S +GYVF LDG AI W S+KQ +V
Sbjct: 1151 GDSIVIVASSVDHLTIAGTRDFVMDFKSAISARFEMSDLGAMRWILGIEVQRDRQARTIAISQRTYIDTVAARFNLETANPVSTPLQPGGVLTRSQSPSTPHQVADMSNV--------------------PYREAVGSLMYAVMGTRPDIAFAVTTLSQFMQNPGRAHWEAVKRVIRYLVGTRELWLVYG--TSDDGIQGFSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVV 1366          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 134 bits (337), Expect = 2.840e-32
Identity = 79/234 (33.76%), Postives = 130/234 (55.56%), Query Frame = 0
Query:    6 IVAVYVDDLVIAGRR-EKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            +VA++VDD+++AG+  EK+ + K +I+ RF++K +  L  +LG++V ++  +A + I Q  Y   ++K+YG + C+ V TPV    K+++                + D+    KE          E +  VGSL+Y  + TRPDI +AV+  A+   +   E  +  KRIF         G+ +   +N D + GF DADWA D+ DRKST+GY F+++G+A+ W S+KQ  V
Sbjct:  952 VVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVS---------------AIEDSELFNKE----------EYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCV 1157          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 133 bits (334), Expect = 7.310e-32
Identity = 84/240 (35.00%), Postives = 125/240 (52.08%), Query Frame = 0
Query:    5 IIVAVYVDDLVIAGR-REKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKI--LAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITF---GGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            +I+A+YVDD++IAG  R  +D FK  +S RF +  L S   +LG+E+ RD    T+SISQ  Y+ ++L+R+G   CR V TP++  LK+  L+  + D    PKP  + L                         GSLMY +  +RPD+A+AV   ++       +      R+F       +L +++      SNG    G+ DADWA DV DR+ST+G  F L G A+ W S+KQQ +
Sbjct: 1178 LIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATID----PKPYQSAL-------------------------GSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSI 1388          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: UPI0018A7F043 (secreted RxLR effector protein 161-like n=1 Tax=Lucilia sericata TaxID=13632 RepID=UPI0018A7F043)

HSP 1 Score: 124 bits (311), Expect = 2.290e-31
Identity = 75/234 (32.05%), Postives = 123/234 (52.56%), Query Frame = 0
Query:    6 IVAVYVDDLVIA-GRREKVDEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            ++A+YVDDL++A   ++K +E K  +S+ F +K L  L+  LGIE ++D     I++SQ  Y++ +LK++  ++C+   TP    +K+            K + A   +    EK             +  VGSLMY    TRPDIA+ V   ++   +  +E     KR+       P +G+ +  +   + L G+ DADW  +++DR+S TGY+FKL  +AI W SRKQ+ V
Sbjct:   10 LLAIYVDDLIVATNNKQKWEELKLELSKSFEMKDLGQLNFCLGIEFKQDEKTKEITMSQRKYIQNILKKFNMEDCKPARTPFNTGIKLS-----------KEMCATEEEKSEVEKI----------PYQNLVGSLMYLAVSTRPDIAHIVSVLSQYNTNYGKEHWIAAKRVLRYLKGTPNIGLHY--RRTNEQLTGYADADWGANIDDRRSYTGYIFKLANAAISWESRKQRTV 220          
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Match: H3H910_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H910_PHYRM)

HSP 1 Score: 125 bits (314), Expect = 2.760e-31
Identity = 76/239 (31.80%), Postives = 122/239 (51.05%), Query Frame = 0
Query:    1 GETNIIVAVYVDDLVIAGRREKV-DEFKHNISRRFRIKYLSSLSCVLGIEVRRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADKPPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDIAYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEGFVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV 238
            G+  I VA+YVDDLV+A   +++ +  KH + +RF +  L  L   LG+E++ DH +  +++ Q  +++ +L ++G  + + V TP    LK+      D        G    DT              +   R  VG+LMY +  TRPD+A AV   ++   D C       KR+       P  G+ F  +++  G+ G+ DADWA D+E R+ST+GY F ++G  I W S+KQ+ V
Sbjct:   61 GQDMIFVALYVDDLVLASSNDELLESTKHALCKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCED--------GCQHEDTMK------------NVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFSREASL-GMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTV 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5171.12502.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3GB17_PHYRM1.070e-3335.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7M7_PHYRM1.290e-3337.18CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
A0A7D9M6E1_PARCT3.780e-3333.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY4.600e-3336.55Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A7D9HZ03_PARCT6.980e-3333.76Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060S825_PYCCI8.470e-3336.55CCHC-type domain-containing protein n=1 Tax=Pycnop... [more]
A0A6S7HEL0_PARCT2.840e-3233.76Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A1M2VV58_TRAPU7.310e-3235.00Retrovirus-related Pol polyprotein from transposon... [more]
UPI0018A7F0432.290e-3132.05secreted RxLR effector protein 161-like n=1 Tax=Lu... [more]
H3H910_PHYRM2.760e-3131.80Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..86
e-value: 4.1E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 47..238
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 47..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5171contigH-paniculata_contig5171:6161..6874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5171.12502.1mRNA_H-paniculata_contig5171.12502.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5171 6161..6874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5171.12502.1 ID=prot_H-paniculata_contig5171.12502.1|Name=mRNA_H-paniculata_contig5171.12502.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
GETNIIVAVYVDDLVIAGRREKVDEFKHNISRRFRIKYLSSLSCVLGIEV
RRDHPNATISISQGGYMREVLKRYGFDECRSVPTPVKGKLKILAPESADK
PPEPKPLGAVLSDTGAGEKESSSGRSGNSSENRGKVGSLMYTLTETRPDI
AYAVHQAARRMEDSCREDLSTCKRIFHSFSTVPELGITFGGKSNGDGLEG
FVDADWAEDVEDRKSTTGYVFKLDGSAIRWCSRKQQLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like