mRNA_H-paniculata_contig5104.12400.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5104.12400.1
Unique NamemRNA_H-paniculata_contig5104.12400.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI)

HSP 1 Score: 424 bits (1091), Expect = 6.240e-147
Identity = 214/316 (67.72%), Postives = 242/316 (76.58%), Query Frame = 1
Query:   22 RPVQRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYGVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIESYL 969
            RPV     R+FSV+ D    S+ L ERGY  +    VL++  + R+RVRLPLLFRGEF+TGVYPDE+HWREGIS++DAPREIVNAWKADRTVASVVLSE L RLAASL GW SAR+AQDDVVWKPPGSGPV +HQDSAYISRQF P  NNSVT+WIALDDCDR                +   A   T+ S  PSFHGADA NYRAPAE AA +LG  VEF+AV V  G CVVH QD WHGS PN+S QRHRRALVVHF+ G++RFIDGHSLQ TGGP+YIYSRYKSL+S  L EEAFPITFS DGYRT WI+++L
Sbjct:    6 RPVVLQQRRTFSVVVDGA-ASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDR----------------EGSAADSSTSRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL)

HSP 1 Score: 246 bits (627), Expect = 4.970e-75
Identity = 138/291 (47.42%), Postives = 178/291 (61.17%), Query Frame = 1
Query:  103 GYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGY---GVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIES 963
            GY+ L  P ++   +  R+R R   LF G+FETGVYPDE HWREG+S   A REIVN WK DR VAS+ LSE LG LA+ L GW   AR+AQDDV+WKPPG+  + +HQDSAYIS QF+P  NNSVTVWIALD+      G +EYA     L         T  +   SFH     ++RA    AA+ +G     V+F+  +VP G C++H  DTWHGSGPN S + HRRAL VH +  + +F      +G   P YIY RY    ST++ E  FP+ ++ DGYR+P + +
Sbjct:  143 GYLCL--PRLIAPDLAIRIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPE-NGAVEYA-----LGSHKWRAQATETATDSSFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP)

HSP 1 Score: 241 bits (614), Expect = 2.470e-74
Identity = 130/273 (47.62%), Postives = 163/273 (59.71%), Query Frame = 1
Query:  130 VLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDG 939
            VLNE  +   R R+  LF GEF+TG+YPDE HWR+GIS   A REI N WK+DR +AS+VL E  GR A  L GW SAR+AQD V+WKP G+G V++HQDS YISRQF P  +NS+T W ALDD D    G IEYA      +            + P FHG    +Y+ P   AA + G     VE   + VPAGS VVH Q+TWHGSG N S QR RRAL +H + G+ +F++         P YIY RYK  ++  L +  FP  + +DG
Sbjct:   74 VLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEET-GVIEYAAGSHEWQP--------RRELEPQFHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA)

HSP 1 Score: 237 bits (605), Expect = 2.380e-73
Identity = 140/285 (49.12%), Postives = 169/285 (59.30%), Query Frame = 1
Query:  124 PGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT------MIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYGV-EFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLES-TELSEEAFPITFSTDGYRTP 951
            PGV+       +R     LFRG+F  GVYPDE HWREGISK DA REIVN WKA   VA V LSE +GRLAA L GWS+ AR+ QDD++WKP G+G VAFH D+AYIS  F P  +NSVTVWIALDD D    G + YA         A  EKA +    T A+    FHG      R PA  AA   G    +F+ +TVPAG  V H QD WHGSGPN+S +R RRAL +H++  ++ F +         P YIY RY   E  T + E  FPI ++  GYR+P
Sbjct:   19 PGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAET-GVVAYAPGSHAWPSAADKEKASV----TDAA----FHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSP 288          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: L8H5R3_ACACA (PhytanoylCoA dioxygenase (PhyH) superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5R3_ACACA)

HSP 1 Score: 238 bits (607), Expect = 2.400e-73
Identity = 133/287 (46.34%), Postives = 170/287 (59.23%), Query Frame = 1
Query:  115 LLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYA--TMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG-VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIESY 966
            L+   +++  +   ++ R PLLFRGEF+TGVYPDE HWREG+ ++D  REIVN+WK+D T+AS VLSE LGRLAA L GW   RV QDD+ WKPPG+  V+FHQD+ Y    F+      +T WIALDD  R  AGT+EY   +   P E   +     TA            +YRA  +  A++LG    E   V VPAG    H   TWHGSGPN    R RR+L +HF+P ++ F      Q TG   YIY RYK   S E+ E  FPIT+  DGYR+P++ SY
Sbjct:   54 LVVDRLIDPSLAEAIKNRFPLLFRGEFDTGVYPDEWHWREGMGRDDVTREIVNSWKSDYTIASAVLSERLGRLAAELAGWMGTRVGQDDIWWKPPGTKAVSFHQDAPYFD--FLNPRRELITCWIALDDTSR-TAGTLEYVRGSHKWPQESKMLQNAFFTAQ-----------DYRASLDHTAKHLGLPRPEVVPVEVPAGGAAFHSGPTWHGSGPNTDKTRVRRSLAIHFLPSHATF------QPTG-VGYIYGRYKKWGSVEMEETFFPITYRHDGYRSPFLASY 319          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA)

HSP 1 Score: 237 bits (604), Expect = 3.690e-73
Identity = 136/302 (45.03%), Postives = 180/302 (59.60%), Query Frame = 1
Query:   31 QRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGY-GVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFS 930
            +RHVH    VL+  V E    R  G+  LL P +++E  +  ++ R   LF G+FETG+YPDE HWREGIS+ DA REIVN WKAD  V SVV S+++G++A++L GW + +RV QDD++WKPP +G VAFHQD+AYIS QF PA NNSVTVWIALDD D    G +EY       +++     G +++V  +FH   +  Y  P   AA   G    E   V VPAG  + H QD WHGS  N+S  RHRRAL +H +  +  +      +    P YIY RY    S    +  FP+T+S
Sbjct:   18 RRHVHSFGGVLS--VTEQESFRRNGF--LLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEET-GVVEYCPGSHLWDES-----GPSSAVSSAFHS-PSEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYVLPGSHTPEDSFFPVTYS 302          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA)

HSP 1 Score: 236 bits (602), Expect = 2.190e-72
Identity = 139/317 (43.85%), Postives = 179/317 (56.47%), Query Frame = 1
Query:   91 LRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGS--------------------GPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT---------MIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGT------GGPTYIYSRYKSLESTELSEEAFPITF 927
            L  RG+ P  +  +L ++   +VR RLP LFRGEF+TG YPDE HWREGISKE A REI NAWK+DRT+ASVVL+EELGRL A +  W S R+AQDD+VWKPP                        V FHQDSAYIS QF P  +NSVT+W+AL+D D+  +G +EYA            A   + +   +  + S   SFH AD  +YR    +AA     G      +AV V  G  + H QD +HGSGPN+S  RHRRALV H+I G+  F+   S   +      G  +YIY RY+   S ++    FP+ +
Sbjct:   26 LSARGFAPT-NHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKE-SGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA)

HSP 1 Score: 239 bits (611), Expect = 2.330e-72
Identity = 156/366 (42.62%), Postives = 195/366 (53.28%), Query Frame = 1
Query:   82 SRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGP----------------VAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT---MIAPL-----------------EKADIAP--HGTT--ASVFPSFHGADALNYR---APAEIAARNLGYGVEFDAVTVPA---------GSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRF------------IDGHSLQGTGGPT-YIYSRYKSLESTELSEEAFPITFSTDGY-----RTPWIESYL 969
            SR + +RGY       +  +R L  +R R+PL+FRG F+TGVYPDE HWREGIS   A REI NAWK+DRTVASVVL E +G+L A +TGW S RVAQDD+VWK P  G                 V FHQDSAYIS+QF P  NNS+TVWI+LDD D   +G +EYA       PL                  +++  P  H T    S+  SFH + +  YR    PA ++A         DA T P          G  + H QDTWHGSGPN S  RHRRALVVH++ G+  F            +   S     GPT YIY RYK   S E+ E+ FPI ++ D       RT W++S++
Sbjct:   87 SRDIYQRGYAKSKGRILSKDRCL-AIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEE-SGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGSLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFI 450          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC)

HSP 1 Score: 231 bits (589), Expect = 3.390e-71
Identity = 129/285 (45.26%), Postives = 165/285 (57.89%), Query Frame = 1
Query:   94 RERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDG 939
            R  G+V L    VL++  +   R R+  LF G+F+TG+YPDE HWR+GIS   A REI N WK+D+T+AS+VL E  GR A  L GW SAR+AQD ++WKP G+G V++HQDS YIS+QFIP  NNS+T W ALDD D    G IEYA+     E            + P FH A   +Y+     AA + G     V    + VPAGS V H Q+TWHGSG N S  R RRAL VH + G+ +F++         P YIY RYK  E   L +  FP  + + G
Sbjct:   14 RREGFVQLGE--VLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEET-GVIEYASGSHEWE--------ADRELAPEFHAA--RDYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277          
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA)

HSP 1 Score: 230 bits (586), Expect = 2.480e-70
Identity = 134/273 (49.08%), Postives = 166/273 (60.81%), Query Frame = 1
Query:  130 VLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWS-SARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYA--TMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFS 930
            VL++  + R R R   LF+G F+TG+YPDE HWREGISK DA REIVN WKAD  +A VV S  LG+LA  L GW   AR+AQDDV+WKPP +G VAFHQDSAYIS QF P  NNSVT+WIALDD D+   G +EY   + + P  KA      TTAS   +FHG    ++  P   AAR+ G     +E   +TV  G  +VH QD WHGS  ++S  RHRRAL VH +  +  + D      T  P YIY RY   +     +E FP T++
Sbjct:   54 VLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDT-GVVEYCVGSHLWPNNKAK----ETTASGS-AFHGQ--AHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6W5_ECTSI6.240e-14767.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4GPA4_9EUGL4.970e-7547.42Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S0E1W7_9CRYP2.470e-7447.62Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S1XNM5_9STRA2.380e-7349.12Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
L8H5R3_ACACA2.400e-7346.34PhytanoylCoA dioxygenase (PhyH) superfamily protei... [more]
A0A7S2S8Y4_9STRA3.690e-7345.03Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A7S0FL38_9STRA2.190e-7243.85Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A6U3ZUB2_9STRA2.330e-7242.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
L1I9R4_GUITC3.390e-7145.26Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A2R5GIF2_9STRA2.480e-7049.08Phytanoyl-CoA dioxygenase domain-containing protei... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5104contigH-paniculata_contig5104:9704..12515 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.8
Seed ortholog evalue2.8e-118
Seed eggNOG ortholog2880.D7G6W5
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Phytanoyl-CoA dioxygenase (PhyH)
EggNOG OGs2BUAT@1,2S22Y@2759
Ec32 ortholog descriptionPhytanoyl-CoA dioxygenase
Ec32 orthologEc-01_011990.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size969
Cds size969
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5104.12400.1prot_H-paniculata_contig5104.12400.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5104 9704..12515 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930497.3995814-CDS-H-paniculata_contig5104:9703..98321622930497.3995814-CDS-H-paniculata_contig5104:9703..9832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 9704..9832 -
1691481319.1462924-CDS-H-paniculata_contig5104:9703..98321691481319.1462924-CDS-H-paniculata_contig5104:9703..9832Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 9704..9832 -
1622930497.4215794-CDS-H-paniculata_contig5104:10244..105671622930497.4215794-CDS-H-paniculata_contig5104:10244..10567Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 10245..10567 -
1691481319.1560204-CDS-H-paniculata_contig5104:10244..105671691481319.1560204-CDS-H-paniculata_contig5104:10244..10567Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 10245..10567 -
1622930497.450673-CDS-H-paniculata_contig5104:10892..109501622930497.450673-CDS-H-paniculata_contig5104:10892..10950Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 10893..10950 -
1691481319.1645498-CDS-H-paniculata_contig5104:10892..109501691481319.1645498-CDS-H-paniculata_contig5104:10892..10950Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 10893..10950 -
1622930497.466101-CDS-H-paniculata_contig5104:11502..116971622930497.466101-CDS-H-paniculata_contig5104:11502..11697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 11503..11697 -
1691481319.1745987-CDS-H-paniculata_contig5104:11502..116971691481319.1745987-CDS-H-paniculata_contig5104:11502..11697Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 11503..11697 -
1622930497.482004-CDS-H-paniculata_contig5104:12251..125151622930497.482004-CDS-H-paniculata_contig5104:12251..12515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 12252..12515 -
1691481319.183551-CDS-H-paniculata_contig5104:12251..125151691481319.183551-CDS-H-paniculata_contig5104:12251..12515Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5104 12252..12515 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5104.12400.1

>prot_H-paniculata_contig5104.12400.1 ID=prot_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=323bp
MRTFPPLRPVQRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVL
NRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVA
SVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQ
FIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVF
PSFHGADALNYRAPAEIAARNLGYGVEFDAVTVPAGSCVVHGQDTWHGSG
PNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTEL
SEEAFPITFSTDGYRTPWIESYL
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mRNA from alignment at H-paniculata_contig5104:9704..12515-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5104.12400.1 ID=mRNA_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2812bp|location=Sequence derived from alignment at H-paniculata_contig5104:9704..12515- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGACCTTTCCTCCTCTAAGACCAGTTCAGCGGCATGTTCATCGATC ATTTTCCGTACTTGCCGACCGGGTTCCAGAAAGCAGGATGTTGCGCGAGC GAGGCTATGTGCCTCTGTTGAGTCCCGGTGTCCTCAACGAGAGAGTACTG AACCGGGTGCGTGTGCGGTTGCCGCTGCTATTCCGGGGGGAGTTTGAAAC AGGAGTCTACCCAGATGAAATTCATTGGAGGGAAGGAATATCAAAGGAAG ATGCCCCGCGCGAGGTGTGTGTGTATAATGGGTCGATACGCTCCCAGATC ACAGTCGGGTAAAAGGAGCGAGGCTGGCAATGCCCAGATCAATTTTAGGT TGGTGCGTGAAAAGCTGAAAATTGTTCCAAAAAAACGAACACTATCACAG AATCAATATTATTTAGTTTACGACCTCTAGATTCCAATAAATACATTTGA CGATATATTCGACGCCTATACAGCCCGAAATCCAGCAGTGAATGATAGCA TTGAATCCATCTCTAATGAAGTAATCAATGAACGGCAAAGTATATTTCCG ACAAACACATCTCACCATTATCCTCCATGCCGAACACTGTAGGGTATTTC GTATCATGTACTATATCGTGTCAACTCCTTCTCTGTGCTCCATATACTGT CTGTAATGGACTTGCGATCTGAACCAGCGGACTCCTTATCATATCTATTA GGTGAGGTTAATAGGTGGGGTTTCTGTGGAGACGAAATAAGTAATCGCCT GAACAACATGACTCCTTCCATCATTGATGATGTCGCTAATCTCTGCCCCC TTCTCACTCTTCATTCAGATAGTCAACGCTTGGAAGGCAGATCGCACCGT GGCTTCCGTTGTCCTGAGTGAGGAACTGGGCAGGCTCGCCGCATCGTTGA CTGGCTGGAGCTCTGCGCGTGTGGCTCAGGACGACGTGGTGTGGAAGCCA CCGGGATCAGGGCCCGTCGCCTTCCACCAGGATTCCGCTTACATTAGTAG ACAATTCATTCCGGTACGTACGCAGCGTCGTCATTGATATTGCGGCCGTT TACGATATGGGGGGTAGGGGGGAGCAAAAGCAAAATTCACGAATATACGG AAGTATTGAGAAGGTATTCATAGTGTTATCAGTCGACCAGCGGTTGGTGC AGGTCGTTCGTTCGACGGCCACCGTTGGAGATTCTGATCGCTCCACACGG TTCTCACGACAGTTGGGCGAAGTTTCGAAGTTTCGAAGTTTCGATTTCGC CTGAGATTGCAGTGGAAAGGTGATTCGGAACGAGTCTGGACGAAGAGCGT CGTTTTCTTTATCGGCGAGCGCAAGTATGCATTCAAGCATGAAAACTCAT TGAAGATTTCTTTACCCGGGGTAAATGAGACGGGCCATGCCACCAGTTGC TGGAATTGCGTAATAAGTTACGTCGTCAGTGTGTAAGCTTTGGTAATGGG GCTATGATGCAAGGTGCACACAGGTCATGGAACGCCTCTGTGCATTTTGT TTTTGTTTCCTCATCCCCGGAATTTTGGCAATCGATCAATCTCATTGGAC CCTCACACGACCCAGGCACTGAATAACTCCGTCACGGTGTGGATTGCTTT GGACGACTGCGATCGGGGGGTAGGTGAGAAGCCTGCGAGAAGCCTTCCTT CAATTTGTCGGTATCTTCGCCTTGTAAATCCAAACCTTCCCCCTTTACAA ATCCCCCCGCCTTATAGAAGTTATAAATTTGCAATATACGCGGAATTTAT ATATTACAGCGACTTGGTTGCCACGGGTTGACTATTGCGATGTTTCATCT CCAAATCCTGACCCCCAGGGATCGAACATGAGCGGATATAAGATAAGATA TTATATATATATGATACCATGGCTCTGCGATCGGAGGTTTCAATGCCCGG AAAACATAGCGTGGCGCTGTTCGTGCTCCTCATACGTACTTTGATTAGCA GGAACGATCGAGTATGCAACAATGATTGCACCACTCGAAAAGGCGGATAT CGCACCGCATGGGACAACTGCCTCCGTCTTCCCGTCTTTCCACGGAGCGG ATGCTCTAAACTACCGCGCACCAGCTGAGATTGCTGCTAGAAATCTTGGA TACGGAGTGGAATTTGATGCTGTAACGGTGCCGGCGGGATCGTGTGTGGT ACACGGGCAGGATACCTGGCACGGCAGCGGGCCGAACATTTCTGGACAAC GCCATCGTCGAGCTCTCGTGGTGCACTTTATTCCAGGAAACTCGAGGTTC ATCGACGGCCACTCGCTGCAGGTAGAAGGATGTGTTTGGAGTGCTTCAGG TAGAGTCGGATAAATCACCCTCCTATGTAGAGTTTCACTTTCGATTGGCT ATTTCCCGTTTTTCTTCAAATGGTTCAGTACAGTTTGCAGTGTGTGAGGG CCCGATAGAGAACTTGTAGATTTTTTTTTGTATGTCTCCCTGTACACTGG GGCACTAGACACAAACGCGCCCTCCAACATGCCAAGGGATGCTTGCTTTT CTTGGAATATGTCAAGATTATGAACATTTGCATCGAGTTTCGCACGCCAA ATCAAACGTACCAGGTGGGGAGAGAATCTTGGAGAAATACCCAAACGGAG GTGGTGTTCCTGTGTGTAGGTCATTACGATCCCATGGTCGGGTAAATCGC CCACTTTACGCCCATGCTGACGTGTCCACTCAGGGAACCGGTGGCCCAAC GTACATCTACAGCAGATACAAGAGCCTGGAGAGCACCGAGCTGTCAGAGG AGGCTTTTCCGATTACGTTCTCAACAGACGGATACCGAACGCCGTGGATT GAGAGCTATCTC
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Coding sequence (CDS) from alignment at H-paniculata_contig5104:9704..12515-

>mRNA_H-paniculata_contig5104.12400.1 ID=mRNA_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at H-paniculata_contig5104:9704..12515- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGGACCTTTCCTCCTCTAAGACCAGTTCAGCGGCATGTTCATCGATC
ATTTTCCGTACTTGCCGACCGGGTTCCAGAAAGCAGGATGTTGCGCGAGC
GAGGCTATGTGCCTCTGTTGAGTCCCGGTGTCCTCAACGAGAGAGTACTG
AACCGGGTGCGTGTGCGGTTGCCGCTGCTATTCCGGGGGGAGTTTGAAAC
AGGAGTCTACCCAGATGAAATTCATTGGAGGGAAGGAATATCAAAGGAAG
ATGCCCCGCGCGAGATGAGGACCTTTCCTCCTCTAAGACCAGTTCAGCGG
CATGTTCATCGATCATTTTCCGTACTTGCCGACCGGGTTCCAGAAAGCAG
GATGTTGCGCGAGCGAGGCTATGTGCCTCTGTTGAGTCCCGGTGTCCTCA
ACGAGAGAGTACTGAACCGGGTGCGTGTGCGGTTGCCGCTGCTATTCCGG
GGGGAGTTTGAAACAGGAGTCTACCCAGATGAAATTCATTGGAGGGAAGG
AATATCAAAGGAAGATGCCCCGCGCGAGATAGTCAACGCTTGGAAGGCAG
ATCGCACCGTGGCTTCCGTTGTCCTGAGTGAGGAACTGGGCAGGCTCGCC
GCATCGTTGACTGGCTGGAGCTCTGCGCGTGTGGCTCAGGACGACGTGGT
GTGGAAGCCACCGGGATCAGGGCCCGTCGCCTTCCACCAGGATTCCGCTT
ACATTAGTAGACAATTCATTCCGATAGTCAACGCTTGGAAGGCAGATCGC
ACCGTGGCTTCCGTTGTCCTGAGTGAGGAACTGGGCAGGCTCGCCGCATC
GTTGACTGGCTGGAGCTCTGCGCGTGTGGCTCAGGACGACGTGGTGTGGA
AGCCACCGGGATCAGGGCCCGTCGCCTTCCACCAGGATTCCGCTTACATT
AGTAGACAATTCATTCCGGCACTGAATAACTCCGTCACGGTGTGGATTGC
TTTGGACGACTGCGATCGGGGGGTAGGCACTGAATAACTCCGTCACGGTG
TGGATTGCTTTGGACGACTGCGATCGGGGGGTAGCAGGAACGATCGAGTA
TGCAACAATGATTGCACCACTCGAAAAGGCGGATATCGCACCGCATGGGA
CAACTGCCTCCGTCTTCCCGTCTTTCCACGGAGCGGATGCTCTAAACTAC
CGCGCACCAGCTGAGATTGCTGCTAGAAATCTTGGATACGGAGTGGAATT
TGATGCTGTAACGGTGCCGGCGGGATCGTGTGTGGTACACGGGCAGGATA
CCTGGCACGGCAGCGGGCCGAACATTTCTGGACAACGCCATCGTCGAGCT
CTCGTGGTGCACTTTATTCCAGGAAACTCGAGGTTCATCGACGGCCACTC
GCTGCAGCAGGAACGATCGAGTATGCAACAATGATTGCACCACTCGAAAA
GGCGGATATCGCACCGCATGGGACAACTGCCTCCGTCTTCCCGTCTTTCC
ACGGAGCGGATGCTCTAAACTACCGCGCACCAGCTGAGATTGCTGCTAGA
AATCTTGGATACGGAGTGGAATTTGATGCTGTAACGGTGCCGGCGGGATC
GTGTGTGGTACACGGGCAGGATACCTGGCACGGCAGCGGGCCGAACATTT
CTGGACAACGCCATCGTCGAGCTCTCGTGGTGCACTTTATTCCAGGAAAC
TCGAGGTTCATCGACGGCCACTCGCTGCAGGGAACCGGTGGCCCAACGTA
CATCTACAGCAGATACAAGAGCCTGGAGAGCACCGAGCTGTCAGAGGAGG
CTTTTCCGATTACGTTCTCAACAGACGGATACCGAACGCCGTGGATTGAG
AGCTATCTCGGAACCGGTGGCCCAACGTACATCTACAGCAGATACAAGAG
CCTGGAGAGCACCGAGCTGTCAGAGGAGGCTTTTCCGATTACGTTCTCAA
CAGACGGATACCGAACGCCGTGGATTGAGAGCTATCTC
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