mRNA_H-paniculata_contig5104.12400.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: D7G6W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W5_ECTSI) HSP 1 Score: 424 bits (1091), Expect = 6.240e-147 Identity = 214/316 (67.72%), Postives = 242/316 (76.58%), Query Frame = 1
Query: 22 RPVQRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYGVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIESYL 969
RPV R+FSV+ D S+ L ERGY + VL++ + R+RVRLPLLFRGEF+TGVYPDE+HWREGIS++DAPREIVNAWKADRTVASVVLSE L RLAASL GW SAR+AQDDVVWKPPGSGPV +HQDSAYISRQF P NNSVT+WIALDDCDR + A T+ S PSFHGADA NYRAPAE AA +LG VEF+AV V G CVVH QD WHGS PN+S QRHRRALVVHF+ G++RFIDGHSLQ TGGP+YIYSRYKSL+S L EEAFPITFS DGYRT WI+++L
Sbjct: 6 RPVVLQQRRTFSVVVDGA-ASQSLAERGYTYVKGLRVLDDVTVARLRVRLPLLFRGEFDTGVYPDEMHWREGISRDDAPREIVNAWKADRTVASVVLSEHLARLAASLAGWDSARIAQDDVVWKPPGSGPVGYHQDSAYISRQFTPRANNSVTMWIALDDCDR----------------EGSAADSSTSRSSLPSFHGADASNYRAPAEAAALSLGRRVEFEAVAVKPGECVVHAQDCWHGSAPNVSAQRHRRALVVHFLRGDARFIDGHSLQRTGGPSYIYSRYKSLDSNRLPEEAFPITFSKDGYRTGWIDTFL 304
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S4GPA4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GPA4_9EUGL) HSP 1 Score: 246 bits (627), Expect = 4.970e-75 Identity = 138/291 (47.42%), Postives = 178/291 (61.17%), Query Frame = 1
Query: 103 GYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGY---GVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIES 963
GY+ L P ++ + R+R R LF G+FETGVYPDE HWREG+S A REIVN WK DR VAS+ LSE LG LA+ L GW AR+AQDDV+WKPPG+ + +HQDSAYIS QF+P NNSVTVWIALD+ G +EYA L T + SFH ++RA AA+ +G V+F+ +VP G C++H DTWHGSGPN S + HRRAL VH + + +F +G P YIY RY ST++ E FP+ ++ DGYR+P + +
Sbjct: 143 GYLCL--PRLIAPDLAIRIRDRFGGLFAGKFETGVYPDEWHWREGLSFPSAAREIVNGWKCDRLVASMALSEALGGLASQLMGWEQGARIAQDDVLWKPPGARGIGYHQDSAYISTQFLPYENNSVTVWIALDEATPE-NGAVEYA-----LGSHKWRAQATETATDSSFHTDS--DHRAAVHAAAKAVGIDSNNVQFEMPSVPLGGCLLHHGDTWHGSGPNRSPETHRRALAVHLLRRDVQF------RGEPAPDYIYGRYALHGSTQVDETFFPVVYAPDGYRSPQLST 417
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S0E1W7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E1W7_9CRYP) HSP 1 Score: 241 bits (614), Expect = 2.470e-74 Identity = 130/273 (47.62%), Postives = 163/273 (59.71%), Query Frame = 1
Query: 130 VLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDG 939
VLNE + R R+ LF GEF+TG+YPDE HWR+GIS A REI N WK+DR +AS+VL E GR A L GW SAR+AQD V+WKP G+G V++HQDS YISRQF P +NS+T W ALDD D G IEYA + + P FHG +Y+ P AA + G VE + VPAGS VVH Q+TWHGSG N S QR RRAL +H + G+ +F++ P YIY RYK ++ L + FP + +DG
Sbjct: 74 VLNEEQVEACRARMERLFAGEFDTGIYPDEWHWRKGISYPGAVREICNGWKSDRVIASIVLGETFGRAACKLMGWPSARIAQDSVIWKPAGAGSVSWHQDSPYISRQFTPVDDNSLTFWCALDDADEET-GVIEYAAGSHEWQP--------RRELEPQFHGLQ--DYQQPLRQAAASAGKDLSQVEITRLVVPAGSAVVHHQNTWHGSGENKSKQRDRRALAIHVLRGDVKFVER--------PGYIYGRYKMGDNDSLHDAFFPYLYRSDG 327
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S1XNM5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNM5_9STRA) HSP 1 Score: 237 bits (605), Expect = 2.380e-73 Identity = 140/285 (49.12%), Postives = 169/285 (59.30%), Query Frame = 1
Query: 124 PGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT------MIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYGV-EFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLES-TELSEEAFPITFSTDGYRTP 951
PGV+ +R LFRG+F GVYPDE HWREGISK DA REIVN WKA VA V LSE +GRLAA L GWS+ AR+ QDD++WKP G+G VAFH D+AYIS F P +NSVTVWIALDD D G + YA A EKA + T A+ FHG R PA AA G +F+ +TVPAG V H QD WHGSGPN+S +R RRAL +H++ ++ F + P YIY RY E T + E FPI ++ GYR+P
Sbjct: 19 PGVVAAGEAKVLREHYAALFRGDFPRGVYPDEWHWREGISKPDAFREIVNGWKASHLVAPVALSERIGRLAAELMGWSAGARLGQDDLLWKPAGAGGVAFHTDAAYISSNFRPYEDNSVTVWIALDDADAET-GVVAYAPGSHAWPSAADKEKASV----TDAA----FHGEGDAGLREPARRAAAAAGVAPPQFEELTVPAGGAVFHHQDVWHGSGPNVSPERPRRALGLHYVRADAGFREAPP------PDYIYGRYVLGEGDTTVHETFFPIVYTPKGYRSP 288
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: L8H5R3_ACACA (PhytanoylCoA dioxygenase (PhyH) superfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H5R3_ACACA) HSP 1 Score: 238 bits (607), Expect = 2.400e-73 Identity = 133/287 (46.34%), Postives = 170/287 (59.23%), Query Frame = 1
Query: 115 LLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYA--TMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG-VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDGYRTPWIESY 966
L+ +++ + ++ R PLLFRGEF+TGVYPDE HWREG+ ++D REIVN+WK+D T+AS VLSE LGRLAA L GW RV QDD+ WKPPG+ V+FHQD+ Y F+ +T WIALDD R AGT+EY + P E + TA +YRA + A++LG E V VPAG H TWHGSGPN R RR+L +HF+P ++ F Q TG YIY RYK S E+ E FPIT+ DGYR+P++ SY
Sbjct: 54 LVVDRLIDPSLAEAIKNRFPLLFRGEFDTGVYPDEWHWREGMGRDDVTREIVNSWKSDYTIASAVLSERLGRLAAELAGWMGTRVGQDDIWWKPPGTKAVSFHQDAPYFD--FLNPRRELITCWIALDDTSR-TAGTLEYVRGSHKWPQESKMLQNAFFTAQ-----------DYRASLDHTAKHLGLPRPEVVPVEVPAGGAAFHSGPTWHGSGPNTDKTRVRRSLAIHFLPSHATF------QPTG-VGYIYGRYKKWGSVEMEETFFPITYRHDGYRSPFLASY 319
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S2S8Y4_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S8Y4_9STRA) HSP 1 Score: 237 bits (604), Expect = 3.690e-73 Identity = 136/302 (45.03%), Postives = 180/302 (59.60%), Query Frame = 1
Query: 31 QRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSS-ARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGY-GVEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFS 930
+RHVH VL+ V E R G+ LL P +++E + ++ R LF G+FETG+YPDE HWREGIS+ DA REIVN WKAD V SVV S+++G++A++L GW + +RV QDD++WKPP +G VAFHQD+AYIS QF PA NNSVTVWIALDD D G +EY +++ G +++V +FH + Y P AA G E V VPAG + H QD WHGS N+S RHRRAL +H + + + + P YIY RY S + FP+T+S
Sbjct: 18 RRHVHSFGGVLS--VTEQESFRRNGF--LLVPNLIDETTVESLKARYVDLFAGKFETGIYPDEWHWREGISRPDAFREIVNGWKADNVVRSVVTSQDIGKIASNLMGWKAGSRVGQDDILWKPPLAGEVAFHQDAAYISTQFEPAQNNSVTVWIALDDADEET-GVVEYCPGSHLWDES-----GPSSAVSSAFHS-PSEGYDKPLYDAANRAGQQNPEIVRVAVPAGGAIFHHQDVWHGSAKNVSKVRHRRALGIHLVQKDVEW------RSNPPPDYIYGRYVLPGSHTPEDSFFPVTYS 302
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A7S0FL38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FL38_9STRA) HSP 1 Score: 236 bits (602), Expect = 2.190e-72 Identity = 139/317 (43.85%), Postives = 179/317 (56.47%), Query Frame = 1
Query: 91 LRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGS--------------------GPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT---------MIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGT------GGPTYIYSRYKSLESTELSEEAFPITF 927
L RG+ P + +L ++ +VR RLP LFRGEF+TG YPDE HWREGISKE A REI NAWK+DRT+ASVVL+EELGRL A + W S R+AQDD+VWKPP V FHQDSAYIS QF P +NSVT+W+AL+D D+ +G +EYA A + + + + S SFH AD +YR +AA G +AV V G + H QD +HGSGPN+S RHRRALV H+I G+ F+ S + G +YIY RY+ S ++ FP+ +
Sbjct: 26 LSARGFAPT-NHQLLTKQTCAKVRDRLPRLFRGEFDTGNYPDEWHWREGISKEHAAREICNAWKSDRTIASVVLNEELGRLVAEVMDWDSVRIAQDDLVWKPPSPQDDSNTRGAVGRELGAQRRIDTVGFHQDSAYISTQFEPYDSNSVTLWMALEDVDKE-SGCVEYAVGSHKWRPLLHYAEGSENEKERNSGSGSEISSFHSADETSYRNSMLVAANLAECGDPQETIEAVPVKEGRAIFHHQDVFHGSGPNMSTHRHRRALVGHYIRGDVSFVTSGSTSRSKQNGPFGTSSYIYGRYRRYNSVDVDTSFFPVIY 340
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A6U3ZUB2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZUB2_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.330e-72 Identity = 156/366 (42.62%), Postives = 195/366 (53.28%), Query Frame = 1
Query: 82 SRMLRERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGP----------------VAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYAT---MIAPL-----------------EKADIAP--HGTT--ASVFPSFHGADALNYR---APAEIAARNLGYGVEFDAVTVPA---------GSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRF------------IDGHSLQGTGGPT-YIYSRYKSLESTELSEEAFPITFSTDGY-----RTPWIESYL 969
SR + +RGY + +R L +R R+PL+FRG F+TGVYPDE HWREGIS A REI NAWK+DRTVASVVL E +G+L A +TGW S RVAQDD+VWK P G V FHQDSAYIS+QF P NNS+TVWI+LDD D +G +EYA PL +++ P H T S+ SFH + + YR PA ++A DA T P G + H QDTWHGSGPN S RHRRALVVH++ G+ F + S GPT YIY RYK S E+ E+ FPI ++ D RT W++S++
Sbjct: 87 SRDIYQRGYAKSKGRILSKDRCL-AIRNRMPLIFRGIFDTGVYPDEWHWREGISFPHATREICNAWKSDRTVASVVLDESMGKLVADITGWESVRVAQDDLVWKVPYDGARRQEEVKVEEKNVNTVVGFHQDSAYISKQFSPYENNSLTVWISLDDADEE-SGCVEYAVGSHKWRPLLHFSGSNSSFLDGDDNSSESNYIPNEHQTDDEGSLLSSFHSSTSNTYRDGLLPAAVSAGVYDSTAITDAATSPVTIEAAPVKEGYALFHHQDTWHGSGPNRSEMRHRRALVVHYLQGDVIFREKCNDKGEASSLSSPSPSSPWGPTTYIYGRYKKFGSQEVDEDFFPIVYARDEAECRKKRTAWLDSFI 450
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: L1I9R4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I9R4_GUITC) HSP 1 Score: 231 bits (589), Expect = 3.390e-71 Identity = 129/285 (45.26%), Postives = 165/285 (57.89%), Query Frame = 1
Query: 94 RERGYVPLLSPGVLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWSSARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYATMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFSTDG 939
R G+V L VL++ + R R+ LF G+F+TG+YPDE HWR+GIS A REI N WK+D+T+AS+VL E GR A L GW SAR+AQD ++WKP G+G V++HQDS YIS+QFIP NNS+T W ALDD D G IEYA+ E + P FH A +Y+ AA + G V + VPAGS V H Q+TWHGSG N S R RRAL VH + G+ +F++ P YIY RYK E L + FP + + G
Sbjct: 14 RREGFVQLGE--VLSKEEVEACRSRMDRLFAGDFDTGIYPDEWHWRKGISLPGAVREICNGWKSDKTIASIVLGERFGRAACELMGWPSARIAQDSIIWKPAGAGSVSWHQDSPYISKQFIPEENNSITFWCALDDADEET-GVIEYASGSHEWE--------ADRELAPEFHAA--RDYQQGLRRAAASAGKEMSQVNIARLLVPAGSAVAHHQNTWHGSGENKSKMRDRRALAVHVLRGDVKFVEK--------PGYIYGRYKLGEDDSLHDSFFPYLYRSQG 277
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Match: A0A2R5GIF2_9STRA (Phytanoyl-CoA dioxygenase domain-containing protein 1-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIF2_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.480e-70 Identity = 134/273 (49.08%), Postives = 166/273 (60.81%), Query Frame = 1
Query: 130 VLNERVLNRVRVRLPLLFRGEFETGVYPDEIHWREGISKEDAPREIVNAWKADRTVASVVLSEELGRLAASLTGWS-SARVAQDDVVWKPPGSGPVAFHQDSAYISRQFIPALNNSVTVWIALDDCDRGVAGTIEYA--TMIAPLEKADIAPHGTTASVFPSFHGADALNYRAPAEIAARNLGYG---VEFDAVTVPAGSCVVHGQDTWHGSGPNISGQRHRRALVVHFIPGNSRFIDGHSLQGTGGPTYIYSRYKSLESTELSEEAFPITFS 930
VL++ + R R R LF+G F+TG+YPDE HWREGISK DA REIVN WKAD +A VV S LG+LA L GW AR+AQDDV+WKPP +G VAFHQDSAYIS QF P NNSVT+WIALDD D+ G +EY + + P KA TTAS +FHG ++ P AAR+ G +E +TV G +VH QD WHGS ++S RHRRAL VH + + + D T P YIY RY + +E FP T++
Sbjct: 54 VLSDDEVQRARGRFEDLFKGNFDTGIYPDEWHWREGISKPDAFREIVNGWKADSQIAGVVRSPTLGKLATELMGWPHGARLAQDDVLWKPPLAGGVAFHQDSAYISAQFKPYENNSVTIWIALDDADQDT-GVVEYCVGSHLWPNNKAK----ETTASGS-AFHGQ--AHHLGPLAQAARSAGVSDADIEIQRITVRTGEAIVHHQDVWHGSAASVSSTRHRRALGVHLVRSDVTWRD------TRRPDYIYGRYYLPQEASPRDEFFPQTYT 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5104.12400.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5104.12400.1 >prot_H-paniculata_contig5104.12400.1 ID=prot_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=323bp MRTFPPLRPVQRHVHRSFSVLADRVPESRMLRERGYVPLLSPGVLNERVLback to top mRNA from alignment at H-paniculata_contig5104:9704..12515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5104.12400.1 ID=mRNA_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2812bp|location=Sequence derived from alignment at H-paniculata_contig5104:9704..12515- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5104:9704..12515- >mRNA_H-paniculata_contig5104.12400.1 ID=mRNA_H-paniculata_contig5104.12400.1|Name=mRNA_H-paniculata_contig5104.12400.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1938bp|location=Sequence derived from alignment at H-paniculata_contig5104:9704..12515- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |