mRNA_H-paniculata_contig5103.12396.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5103.12396.1
Unique NamemRNA_H-paniculata_contig5103.12396.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: D7G7K1_ECTSI (Rit1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K1_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 8.810e-45
Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 1 
Query:  286 QFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            QFVS LV+ YRR G  YPVFANLRNGLWY K+WDG CYFKSTDGHS RW+FSYTRLNIHLA AAA+AGGC VVDSTR+GKRFP
Sbjct:   11 QFVSGLVEAYRRSGAAYPVFANLRNGLWYGKDWDGTCYFKSTDGHSRRWAFSYTRLNIHLAAAAAAAGGCIVVDSTRAGKRFP 93
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A835YSK0_9STRA (Initiator tRNA phosphoribosyl transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSK0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 4.560e-37
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 1 
Query:  202 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYR-RHGCN-YPVFANLRNGLWYR--KEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            S+G++ R +++  R+D+LN   SI  D  ++++ +   R R GC  +P FANLRNG WY     W+G CYFKS DGH G+W+FSYTRLN+H+AC AA AGGC VVDSTR GKRFP
Sbjct:   38 SVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFP 152
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A1Y1HXV4_KLENI (Initiator tRNA phosphoribosyl transferase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXV4_KLENI)

HSP 1 Score: 120 bits (300), Expect = 3.330e-28
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 1 
Query:  199 MSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            +SI +L R ++R E+ND+ N   SI  D  FVS +    RR   + P+ ANLR G+WY   +DG+CYFKSTDGH+G WSFS TRLNIH+A  AA  GGC +VD+TR GKR+P
Sbjct:   10 LSIYKLSRLIKR-EQNDLYNSLRSIYADSLFVSEI----RRLYPSLPLLANLRCGIWYSPHFDGSCYFKSTDGHTGNWSFSCTRLNIHVAELAARHGGCIIVDATRRGKRYP 116
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A0D2LNS3_9CHLO (tRNA A64-2'-O-ribosylphosphate transferase (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LNS3_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 3.670e-28
Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = 1 
Query:  205 IGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            +  ++RD++R E ND+ +   S+  DE+FV+ L   Y     + P+ ANLR GLWY   +D  CYFKSTDGH+G WSFS TRLN+ LA AAA+ GG  VVD+TR GKRFP
Sbjct:   21 LSSVLRDLKR-ESNDLWSCINSLLEDERFVAELRQLYP----SLPLVANLRCGLWYAPRFDATCYFKSTDGHNGWWSFSTTRLNMALAEAAAARGGAVVVDATRKGKRFP 125
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A7S3UNI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNI5_HETAK)

HSP 1 Score: 109 bits (273), Expect = 3.560e-27
Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 1 
Query:  229 RRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCN-----YPVFANLRNGLWY--RKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            ++ ER  + N   SI  D +FV  ++  YR          +  FAN RNG+WY   +EWDG CYFKS DGH GRW+FS  RLN+H+A AAA AGG  VVDSTR GK  P
Sbjct:    1 KQQERTSIYNHCKSIQHDSEFVVDVLGVYRSWAFEKKCLPFTCFANKRNGVWYAPEEEWDGLCYFKSADGHEGRWTFSQGRLNLHVARAAAEAGGVVVVDSTRRGKDCP 109
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A388K2T9_CHABU (Ig-like domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K2T9_CHABU)

HSP 1 Score: 116 bits (290), Expect = 7.330e-27
Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 1 
Query:  202 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            SI ++ R ++R + N++ +   SI  D  FV  +   Y     + P+ ANLR GLWY + +DG CYFKSTDGH G WS S TRLN+H+A AAA  GGC +VD+TR GKRFP
Sbjct:   59 SIYKISRQIKRQD-NELYSCLRSIYEDSMFVDEIAQRYS----SLPLLANLRCGLWYSRRFDGTCYFKSTDGHMGNWSLSLTRLNMHVAMAAAIRGGCVIVDATRRGKRFP 164
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A2R6XUT9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUT9_MARPO)

HSP 1 Score: 115 bits (288), Expect = 9.650e-27
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 1 
Query:  181 TSAVVEMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            T+     +I R+ R +++ E+  + N   SI  D  FVS +   +R      P+ ANLR GLWY  ++DG CYFKSTDGH+G WSF+  R+N+H+A  AA  GGCF+VD+TR GKRFP
Sbjct:    5 TNPPANENIYRVTRRIKKTEQT-IYNALRSIHDDSLFVSEIRHLWRE----LPLLANLRCGLWYSSDFDGTCYFKSTDGHNGNWSFNTGRMNLHVAMLAAERGGCFIVDATRKGKRFP 117
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A8HVT9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HVT9_CHLRE)

HSP 1 Score: 108 bits (271), Expect = 1.900e-25
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 1 
Query:  202 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            SI ++ R +++++ + + N   S+  D  FVS +   Y       P+ ANLR GLWY ++ DG CYFKSTDGH+G WSFS TRLN+H+A  AA  GG  +VD+TR GKRFP
Sbjct:    4 SIWKVTRQLKKEQLS-LYNCLASVLSDAAFVSEIRALYP----TLPLLANLRCGLWYARQPDGTCYFKSTDGHNGNWSFSCTRLNLHVAEVAARQGGVIIVDATRKGKRFP 109
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: B8LR66_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LR66_PICSI)

HSP 1 Score: 110 bits (276), Expect = 4.290e-25
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 1 
Query:  202 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            SI ++ R ++R +++ + N   SI  D  FV+ +    RR   + P+ ANLR GLWY   +D  CYFKSTDGH+G WSF+ TRLNIH+A  A   GGC +VD+TR GKRFP
Sbjct:    9 SIYKVCRTIKRMDQS-LYNALRSIYRDSLFVAEI----RRLWPDLPLVANLRCGLWYSSHFDATCYFKSTDGHAGNWSFNPTRLNIHVATIAVEKGGCIIVDATRKGKRFP 114
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BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A7N2KWZ3_QUELO (Rit1_C domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KWZ3_QUELO)

HSP 1 Score: 107 bits (268), Expect = 5.030e-25
Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 1 
Query:  196 EMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 534
            ++SI R  R ++R E N + N   SI  D  FV  +   +     + P+ ANLR GLWY  ++   CYFKSTDGH+  WSFS +RLN+H+A  A   GGC +VDSTR GKRFP
Sbjct:   10 KLSIYRAARSIKRRE-NTVYNALRSIYEDSIFVGEISQLWP----DLPLLANLRCGLWYSPKFHSTCYFKSTDGHNNNWSFSTSRLNLHVALLAGQKGGCIIVDSTRRGKRFP 117
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7K1_ECTSI8.810e-4581.93Rit1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YSK0_9STRA4.560e-3754.78Initiator tRNA phosphoribosyl transferase-domain-c... [more]
A0A1Y1HXV4_KLENI3.330e-2854.46Initiator tRNA phosphoribosyl transferase family p... [more]
A0A0D2LNS3_9CHLO3.670e-2852.73tRNA A64-2'-O-ribosylphosphate transferase (Fragme... [more]
A0A7S3UNI5_HETAK3.560e-2750.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A388K2T9_CHABU7.330e-2750.45Ig-like domain-containing protein n=1 Tax=Chara br... [more]
A0A2R6XUT9_MARPO9.650e-2747.46Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A8HVT9_CHLRE1.900e-2548.65Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
B8LR66_PICSI4.290e-2549.55Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A7N2KWZ3_QUELO5.030e-2547.79Rit1_C domain-containing protein n=1 Tax=Quercus l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5103contigH-paniculata_contig5103:2026..9209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score154.1
Seed ortholog evalue6.1e-35
Seed eggNOG ortholog2880.D7G7K1
Preferred nameRIT1
KEGG koko:K15463
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016757,GO:0016763,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0043170,GO:0043399,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564
EggNOG free text desc.tRNA A64-2'-O-ribosylphosphate transferase activity
EggNOG OGsKOG2634@1,KOG2634@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons3
Model size535
Cds size516
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5103.12396.1prot_H-paniculata_contig5103.12396.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5103 2044..9209 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930496.8810444-UTR-H-paniculata_contig5103:2025..20431622930496.8810444-UTR-H-paniculata_contig5103:2025..2043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5103 2026..2043 +
1691481318.9449992-UTR-H-paniculata_contig5103:2025..20431691481318.9449992-UTR-H-paniculata_contig5103:2025..2043Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5103 2026..2043 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930496.89834-CDS-H-paniculata_contig5103:2043..23091622930496.89834-CDS-H-paniculata_contig5103:2043..2309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 2044..2309 +
1691481318.9562733-CDS-H-paniculata_contig5103:2043..23091691481318.9562733-CDS-H-paniculata_contig5103:2043..2309Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 2044..2309 +
1622930496.910878-CDS-H-paniculata_contig5103:6156..63001622930496.910878-CDS-H-paniculata_contig5103:6156..6300Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 6157..6300 +
1691481318.9738615-CDS-H-paniculata_contig5103:6156..63001691481318.9738615-CDS-H-paniculata_contig5103:6156..6300Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 6157..6300 +
1622930496.922159-CDS-H-paniculata_contig5103:9103..92091622930496.922159-CDS-H-paniculata_contig5103:9103..9209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 9104..9209 +
1691481318.985965-CDS-H-paniculata_contig5103:9103..92091691481318.985965-CDS-H-paniculata_contig5103:9103..9209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5103 9104..9209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5103.12396.1

>prot_H-paniculata_contig5103.12396.1 ID=prot_H-paniculata_contig5103.12396.1|Name=mRNA_H-paniculata_contig5103.12396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MAAGTPTYDNDIAHAAVDDAENAAYDYRNSKREMDIVEPSTGACNSTVDA
SYYATSAVVEMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYR
RHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLA
CAAASAGGCFVVDSTRSGKRFP
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mRNA from alignment at H-paniculata_contig5103:2026..9209+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5103.12396.1 ID=mRNA_H-paniculata_contig5103.12396.1|Name=mRNA_H-paniculata_contig5103.12396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7184bp|location=Sequence derived from alignment at H-paniculata_contig5103:2026..9209+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTTTTAGATAAGTCAAACATGGCTGCAGGAACACCCACTTACGACAATGA
TATCGCACATGCTGCGGTAGACGATGCTGAGAATGCTGCTTATGACTACA
GAAATAGTAAACGGGAGATGGATATTGTCGAGCCATCCACAGGTGCTTGC
AACTCTACCGTTGATGCCTCATATTATGCCACTAGTGCTGTGGTTGAGAT
GAGCATTGGCCGCTTGGTCAGGGATGTGAGGAGGGATGAGAGGAATGATA
TGCTTAACCGTTTCCTTTCCATCGATATGGACGAGCAGGTTAGTTGTAAG
CAGTAAGAGCTTGGTAAAACACGTGTGTCCGCAAGGGTACCTTGTTTTTC
TCTCAATAAATACCTCTAAAGCACACACATGATACCACCATCAGCGGCAT
GCCAATGTTCCGTATATTGCAGAAAGAGACCGTACCTTTCATTGCATTTT
CAGTTTCATGGACTTGGCGTATCATGTACTGCTACTAACTGTAACCGGGT
ACTCTCTCGTATGTACATACTGGTATTGTCATGTTTACTTCATCTTTTCC
AACATTCATGATCTGGGTTGCCTATCCCGCGATCGGATGTTGTATCAACT
GTGGTTGGGATGGGAAAGGAGAGATGTTTTCGAGTTTGTGACCTTCACAC
TACCTGATGTAAACCTGCTTGTCCCGTAGTCATTTAAATCCCTGGTAGTA
CACAAATATTTAATATTTATAGTACTACAGGAAACTTGTTGAGCGTCGGA
GGGCTGTTTGGGAAGAAAATATATTTTTTTGACAATTAACGCCGAGCGCT
GCAATCGTTGTGCCCGGAATCATGCCAGCTTTCTCTTTATATGCGCTGGA
TATATTGGATTGATTATAAATAGTGCTGCTCCCCTATGGTCTATTCAACG
CAATTTTTCCAATACAGTATCTCACGAACGAAAAGGAGTTGGAAGGTGAA
ACAAACATGGTTATGATCTCCTCGCCGAGTAGTGTCCAAATATGTCTAGA
AAATGATTTAGAAAAAAAAAATAGAAATGCAACATTTTGGCAAAAACTAT
TCCAAAATTGTTATAATTTCTCTCGATGTGACCATCGAAAAGGAAATATA
TTGATGATGGAATTGTGTTGGTTATCTTCTGGATAAGCAGTGTTCAACAT
GATGTATGAACAACTGTAAATGCGATTATTCCAATTATCAATACAAGTGA
ATGTTCAATATTTAACATCGATGTACATAACTACAGTTTTACCCTGAGGA
CGCCCTTTGTTATCGCGCACACCGCGTATAACAGCACTAAATCCAACAGA
ACAAGTGACGAAGCTAGGTCATAGGAACCAAAATAACAAAGTACTCCGGA
GTACAACATCTCGGGTGAGCCACTTAATCAACAGTAGTTCGAAAAAATCA
GCACAACACCTGCATATGATATCAACAATAACCGGGCAGAACCTCCCCAC
AGTCTTTTCACCCAGAAATATTCGAACCCTGACCCACGGTGACCCGTTGT
CAATGGGAAACACAACATCGGCATCTGTTCTCGCGGCGCCGTGCGATTCT
GCTTTCGTGGACGTGGCATGCTCAGCCACGGGTACGAGCTGTAGCTGCTG
TGCTGACTGTACTGCCTGTACATAAACGGTGGCTTGTGTACTTTGGCATG
TGGCATATCGGAAGATGGCAATACCCATCTATAAATGTAATTAACATAGA
ACATCTCTCGACGGCCGGCAGCGCATATTTTGTTCGTCATTTTCTCCGTC
TATATAGTTTTCCTCGGGAAGGCAGTTTAAGATGAGTGAAGTGTGGAAGC
AGTGGCGTCAATTGCCGAACCTTTTGCAAGTATTGACGGTGACCTTTTCG
AGGGCAAAATAATCGGGATCCGGACAGTATTACTCCGGAGTATCAGTTTT
TTGTCAATAACTTGCTCAATTTTTCGAATTTTTATTTCGGACAAAAAAGA
GGGTGAGGGAGAGATCGAGAGACGTCCAAATCGGTGGTCGAAAAGTTCGC
CCCAAACAAATTACTCCAGGAAAAAAAATGAACGATTTTCAACGTTCTTG
GAAAAAAACCTTGCTGAAGAGCAAAAAAAAACAAAACATTCCACCGCTCT
TGTCTCCGCCGAAAGACGCGCATTTCCAAGGTTTCTTCGGGTTTGGTGGG
CCACAAGCGTCCGACCCTGTGGCGATTCTCGAAATTTCCGCGGGGATTCA
ATACTAAGAATCCCAGCAAGTCCTGGTTGTGTGTGCCTGTCGCCAAAGTG
TTTCCGCGAAGCAATCCGTGCCCGCCGTTTGTTGACGCGACTCCCTCTAC
CCAGCCCACCCACCCACCCACCCACTCATGGTTCTCCACTTGTAGTGTGG
CATTTTATTGCGAAGCCAACGTGCGGGCGCGTTACTTGTATTAGGCCATC
TCTTACGGGGTCGAATTTTTCCAGTCGAATTTCTCTACTTTCCGATTTCT
CGAAGAGTGCAAAAATCTGATCTTCAATATTCGATTCGTGTGTGTTGTGG
GGTCGGATTTCCCGAAGGTGGTTTTTTATGGAGGTTTACAGGCGTGGTAG
TACAAGCGGCATAATTCAAAGACACCCTTCAGCGTTGGGTCCTCGAGTGG
GTCCTCGAGCACACCACCCAAGACATCACCCTCGTACATGCCACCCTCTA
GCACACCCGCCAACACACACTCGCATCACCATTTAAAGAGCACACGATCA
TGAGTGTACCGTCAACTGCGATGCATCTTACGACGAGCCCATGCGTGGAA
TGGGTGTGGAGTGAGATGAAGACTCAAGGGATCAAATCGGCTGTCAGGAA
GGTACAGTGGATGATACTGCAGAGTGTACCACTGTGGTACGCTTGTACTG
GTGTGAAGCAGAACGGTGGGATCATATCTTAGGTCAACAGGAAAAAGGCC
GCGGTTGAATTGTACGATAAGATCGCGGTCCACAGCTTCCTCCGCTGGGT
GGAAGAAACCCCCGGGCTTGCAGTCCCGCAAGTTCTATATGGCGGCGGGG
GTCATATACCTTGGCGTGTCTGTATTTTTTGTGTTTATGTATTGCTATAT
GCTGTGGCATTCAAACGTTGGATAAAAAACATTAACGCCTTCATTTGGTG
GTACTCCAAGAAATTCGATACCTGAGGGCAACTCTGATTTCTGCCAGAAA
TCGGGGAATGGGACCGGCTGTACCTCCCGTCTCGGATTTCTCAACTCAGA
CTTCTAAGAAATCCAACCGCATAACATGGAAAATCGAATTTCTCGGAGTC
GCAAAGTTCGAAAATCTGTATTCTACTGGAAAAATCCGACCCCATAAGAG
ACGGCCGTAGCATCCAACAGAGTTCAAATCCGCGACGTCCGGAGCACATT
CATTGCACCGAAATGGCCGAGTCCATACAACCGGAAGTGCCTATGCTGTC
TTCAGTTGGTACCATTTCTTTTCGTTTTTCGGTATGCTGCCGCCGTTTCG
TCGATCGCTCCAGACACTGTGTCAGGCAACATTACGTGTCTGTGCAACAC
CTGTCAGCGTCTCAGGCTCTGCCCCGGTGCTTCTCTAAACCTGTTCAGGT
TCACTCCACGTTTTCTGAATATTTATAAAAAACGATTTTGGGGGCACGGG
CACGCGAAACCCCTTGATCTGGTGCCGTTTGCTTTGCTTGTTTGTCGTCA
CTCGTGTTTTGTCGGCGCAATTGTGCACGTCTTCCTGCGCCCCGAACGAA
AACAAAACGTGGAGCCCGTTTTCTCCGTGCTTAGTGGTTAACGTTGGTCG
TCGGTCTACATACACGCACAAACCGGCTTGTGCCCTCCCGCCCGTGTTTA
TTAAGAAAAACCGTATGTTTATTTTGGTGCTTCCTCATTGCCACAGTCTT
GTTTGTTTTTTTTTGTGTACGTGGGCAAGAGAAAAAAAACAGACCGTAGG
TTTTGTTTATTTTAGAAGTTCTGTTTTGTTATATTTCAATTGAGCATCTA
ATACAGTCATCGATGTTCTAATACCACTTTAGAGAAGTCGTTCTAAATGA
TACAAATCATCAGCAAGACTTCGAAAGAGCGGTGCGGTTTGAGCAAAAAA
TAACGTGCAATCTCTTGCAAAATTTGACAGATGCTGAAGATGTTTTGTTC
TGTCCGACGGATGTTAATTGTTTTCCCTGAGGCAGTTCGTGTCCGCTCTC
GTTGACACGTACCGACGTCACGGCTGCAACTACCCGGTTTTCGCCAACCT
CCGGAACGGGCTATGGTACAGGAAGGAGTGGGACGGAGCGTGTTACTTCA
AGTCTACAGACGGACATAGCGGCAGGTGACATTCGTGTGACGACGATAGG
GGTGGGAAACGGGATGTCATATATATATTCGTAATAAGATGATAGAAAGA
ACGAAAACACACTATAGGAAACGCAAAAACACAAATGAGCACGATTTATG
ATCTGTTACAAGATTTAATTTTCATCCATAAATACTGCAAGGGTTTGCAA
CAAAATTGCGTAATAGCTTTCACCTGAAGGATTGTCCAGCGTGAGCATGT
TTATTTGTGTGTGCCTCGAACCGTCTACCTATGACTCTGAATACTAAATA
GTGTAAGTGATCAGTCATGGGTGAACAGTTTCACCTTATTTTACTATGTG
CCTCCACATTTGTAAAATTCGGGCTGATATGAACTATGTTTCAGCTTTTG
TCGCAAATGCTCGTAATATTCGTATCCGTCCAAGGCGTTGCAAGATGTAG
CGATCCTTAAATAGCGCGCCATGCGTTTAAGATCTTTACTGCAAGAGAGT
AGGGCTGCTGCAAGGGTGGGGGTAATTTGTTCAACGAGTGCTGATCCAGA
AAACCGTGTTGAAAAAATCTATTCAAAACCTATTTAATGGCATGCGTTCA
TACATCCCCAAGGGTGCACAATGCACGATTTACAGTGGTCGTGCTGTTCA
AGGGAGAAAACTTCGGATTAGCGTTAGTGCCAAACCCTAACCCTAACCCT
AACCCTAACCCAAGAGCAGTTCTGTCTAATAATCAAGTTTCTAACGTTTT
CGCCCTCCGGACGAACACGAATATTTGGAGTTGTCGTGACGAAAATTTTC
CAAGTATTCGCCCGACTTTCAGGAAGTGCGCGCTCATAGAATAAAGTCTC
GACCCCTGTTTGTTGGATTTACTACTTTTCGTAGCAATTCGTGGGAGATG
GTCCAGGGCACATAGAATACACGTGCCCTTGCGGAACCTCCAGGCGAATA
CATATATATATACATATTTCGTCGCGAATGCTTCAAGTATGCGTATGCAT
CGGTGGGAATGAAGCCTTCAAACCTTTCCGTTCCACCATGGATAAGGATT
CCATGTTTTATGGTCGTGAAAGAATAGAAAAATAATGATACTATTAGTTC
CAACTCAAGTTCTCGAGAGTCTTAAAGAGTATCCGAGATTTTTTTTCCAG
ACATGTGACAGTTGCCAGATGGTTTGAGTCGAGCAGGTTGCAAACAAGGG
AAGGGCTAGCTGAGAAAAAATGTATATATATATATATTGCCATGAGGGTC
AGAGACGGTAGTAGCTAGAGTAGGAAGACAACATGCGTGGTTATTGAAAT
GTGCAGGTTCGACCAGAACCAGCATGCATGTCTTTTAACGGTTTCACTTG
GTTTTGTATCGGTTGGGATGATTCCGGGTTTGAGAAGAGAATGCTAGGGT
TCACGCAGGAACTATATTATGTAGCTGTAGTTCCTGCGTGAGGATAGCTC
CCCCTTGCTAATCACTGTTACGCAAACGTTTGGGTTTGGTGTCAAAGAGA
ACTCGGAGAGCTAATAAACGTGACTCTTAGAGGATAACTATAACCAATAA
TCTACGTGCGAACGATATCACAGAGAGGTATAGGAATCTCATCACAATAT
ATATATATGTACCACTTGTGTTGCAATCCAGTGGATGATGTCGATACAAA
CAAAGTTCTGGGCGAAGAAACCAAACGTGGCACCACAAGCCCCACCTGTT
ATTCTTGAGGATTTTTGGTATATCGTGGTCTACACACGCATAAATGTTCT
GAACGTTTAAAGACACTATGACCGCCGTGTTCCTTATATCACAAGCGACG
TCCTCTGGGGGGTATAAACTCGTGTGATGATACCTGGAGTGTGCGTGGTG
TCTTGAATATTTCGTGGTTGGTTCCATGATGTTGAAATTGACGTAGGTAT
TTTGTGTTTGGTTGATTTTTGGGTGCTGCCAATCTTTTAATTGAAAATGG
AATGTGTCATCACAAGTGTAAGTTTATCATCGACACGCAGAACTCGATCT
CGTGGATACTTGAGAGTATGAAACCACGTCGCGAGAGCACTATGGGGCAT
GGTTAGTGCCCCCATGCTTGTAGTAAACGTCTGGCATAACTTAGGAACCT
CGCGCCGCAGCTTGCGAACAGAGCATTTTTCTGGTACCCACACCCTTTTC
AGTTTTGTACCACAAAAGAAACATGGGTTGTGTTCAAAATCGATACTGGT
ATAAACAAAAGCGAACTTAGATCATTGCCACTATGATTGACCTAAGGAAT
ATGTGACGCATACTGTCTGCGGTGTCCGTATTGATTGACTGGTCGCTGAT
TGGCGGCTGTTAGCGAGTCGTTCATAAGCTTATAAAGGACGTCAACGGAT
GCACGAGGCGGCAGCTTCCTCCTGTACACGCGTTTTGGTGGGGTGCTATT
GGCTTGACTTCTCTACTAAACGTATCATGTCAACATGTGTTGGTGTATGG
TACCTATGGTACAACAATTCTCGGTCGGACACAACAGATGATAATCGAGT
CTGCAAGAGAAACTGTCATACCGTATCTTGTTTTCTGTTGTATTTCCTAA
TCATGTTGTGCACGCCGCGTTCAGTCCCGTCTTGACTGAATGTTCACAGA
CACTGCCTCGCATCCCTTCTCTGTGTCTCTAGCATGGCATATGCGAGACT
CGTCCGCTCTCCGCCTGCGCGGCGTATTGCTTAATAGGCAAATCCTATAC
AAAAAACGCATTTCCCAGTTCAACAGGTTCCCTTTTGTTGAACCATGTTT
TTTCGTTTCACATGACGTGCAACACAGTTGATACATATATCCTGGTGTTT
GCTACTGTCATGTTTTATTATTCTCCAGATGGTCATTCAGCTACACTCGC
CTCAATATTCACCTGGCTTGCGCCGCTGCTTCTGCAGGAGGGTGTTTCGT
CGTGGACTCCACGCGAAGTGGTAAGCGCTTCCCA
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Coding sequence (CDS) from alignment at H-paniculata_contig5103:2026..9209+

>mRNA_H-paniculata_contig5103.12396.1 ID=mRNA_H-paniculata_contig5103.12396.1|Name=mRNA_H-paniculata_contig5103.12396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1032bp|location=Sequence derived from alignment at H-paniculata_contig5103:2026..9209+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGCAGGAACACCCACTTACGACAATGATATCGCACATGCTGCGGT
AGACGATGCTGAGAATGCTGCTTATGACTACAGAAATAGTAAACGGGAGA
TGGATATTGTCGAGCCATCCACAGGTGCTTGCAACTCTACCGTTGATGCC
TCATATTATGCCACTAGTGCTGTGGTTGAGATGAGCATTGGCCGCTTGGT
CAGGGATGTGAGGAGGGATGAGAGGAATGATATGCTTAACCGTTTCCTTT
CCATCGATATGGACGAATGGCTGCAGGAACACCCACTTACGACAATGATA
TCGCACATGCTGCGGTAGACGATGCTGAGAATGCTGCTTATGACTACAGA
AATAGTAAACGGGAGATGGATATTGTCGAGCCATCCACAGGTGCTTGCAA
CTCTACCGTTGATGCCTCATATTATGCCACTAGTGCTGTGGTTGAGATGA
GCATTGGCCGCTTGGTCAGGGATGTGAGGAGGGATGAGAGGAATGATATG
CTTAACCGTTTCCTTTCCATCGATATGGACGAGCAGTTCGTGTCCGCTCT
CGTTGACACGTACCGACGTCACGGCTGCAACTACCCGGTTTTCGCCAACC
TCCGGAACGGGCTATGGTACAGGAAGGAGTGGGACGGAGCGTGTTACTTC
AAGTCTACAGACGGACATAGCGGCAGGCAGTTCGTGTCCGCTCTCGTTGA
CACGTACCGACGTCACGGCTGCAACTACCCGGTTTTCGCCAACCTCCGGA
ACGGGCTATGGTACAGGAAGGAGTGGGACGGAGCGTGTTACTTCAAGTCT
ACAGACGGACATAGCGGCAGATGGTCATTCAGCTACACTCGCCTCAATAT
TCACCTGGCTTGCGCCGCTGCTTCTGCAGGAGGGTGTTTCGTCGTGGACT
CCACGCGAAGTGGTAAGCGCTTCCCAATGGTCATTCAGCTACACTCGCCT
CAATATTCACCTGGCTTGCGCCGCTGCTTCTGCAGGAGGGTGTTTCGTCG
TGGACTCCACGCGAAGTGGTAAGCGCTTCCCA
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