prot_H-paniculata_contig5103.12396.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5103.12396.1
Unique Nameprot_H-paniculata_contig5103.12396.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length172
Homology
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: D7G7K1_ECTSI (Rit1_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7K1_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 7.090e-45
Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 0
Query:   90 QFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            QFVS LV+ YRR G  YPVFANLRNGLWY K+WDG CYFKSTDGHS RW+FSYTRLNIHLA AAA+AGGC VVDSTR+GKRFP
Sbjct:   11 QFVSGLVEAYRRSGAAYPVFANLRNGLWYGKDWDGTCYFKSTDGHSRRWAFSYTRLNIHLAAAAAAAGGCIVVDSTRAGKRFP 93          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A835YSK0_9STRA (Initiator tRNA phosphoribosyl transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSK0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.700e-37
Identity = 63/115 (54.78%), Postives = 82/115 (71.30%), Query Frame = 0
Query:   62 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYR-RHGCN-YPVFANLRNGLWYR--KEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            S+G++ R +++  R+D+LN   SI  D  ++++ +   R R GC  +P FANLRNG WY     W+G CYFKS DGH G+W+FSYTRLN+H+AC AA AGGC VVDSTR GKRFP
Sbjct:   38 SVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFP 152          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A1Y1HXV4_KLENI (Initiator tRNA phosphoribosyl transferase family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXV4_KLENI)

HSP 1 Score: 120 bits (300), Expect = 2.710e-28
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 0
Query:   61 MSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            +SI +L R ++R E+ND+ N   SI  D  FVS +    RR   + P+ ANLR G+WY   +DG+CYFKSTDGH+G WSFS TRLNIH+A  AA  GGC +VD+TR GKR+P
Sbjct:   10 LSIYKLSRLIKR-EQNDLYNSLRSIYADSLFVSEI----RRLYPSLPLLANLRCGIWYSPHFDGSCYFKSTDGHTGNWSFSCTRLNIHVAELAARHGGCIIVDATRRGKRYP 116          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A0D2LNS3_9CHLO (tRNA A64-2'-O-ribosylphosphate transferase (Fragment) n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LNS3_9CHLO)

HSP 1 Score: 110 bits (276), Expect = 3.020e-28
Identity = 58/110 (52.73%), Postives = 75/110 (68.18%), Query Frame = 0
Query:   63 IGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            +  ++RD++R E ND+ +   S+  DE+FV+ L   Y     + P+ ANLR GLWY   +D  CYFKSTDGH+G WSFS TRLN+ LA AAA+ GG  VVD+TR GKRFP
Sbjct:   21 LSSVLRDLKR-ESNDLWSCINSLLEDERFVAELRQLYP----SLPLVANLRCGLWYAPRFDATCYFKSTDGHNGWWSFSTTRLNMALAEAAAARGGAVVVDATRKGKRFP 125          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A7S3UNI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNI5_HETAK)

HSP 1 Score: 109 bits (273), Expect = 2.930e-27
Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   71 RRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCN-----YPVFANLRNGLWY--RKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            ++ ER  + N   SI  D +FV  ++  YR          +  FAN RNG+WY   +EWDG CYFKS DGH GRW+FS  RLN+H+A AAA AGG  VVDSTR GK  P
Sbjct:    1 KQQERTSIYNHCKSIQHDSEFVVDVLGVYRSWAFEKKCLPFTCFANKRNGVWYAPEEEWDGLCYFKSADGHEGRWTFSQGRLNLHVARAAAEAGGVVVVDSTRRGKDCP 109          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A388K2T9_CHABU (Ig-like domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K2T9_CHABU)

HSP 1 Score: 116 bits (290), Expect = 5.980e-27
Identity = 56/111 (50.45%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   62 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            SI ++ R ++R + N++ +   SI  D  FV  +   Y     + P+ ANLR GLWY + +DG CYFKSTDGH G WS S TRLN+H+A AAA  GGC +VD+TR GKRFP
Sbjct:   59 SIYKISRQIKRQD-NELYSCLRSIYEDSMFVDEIAQRYS----SLPLLANLRCGLWYSRRFDGTCYFKSTDGHMGNWSLSLTRLNMHVAMAAAIRGGCVIVDATRRGKRFP 164          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A2R6XUT9_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XUT9_MARPO)

HSP 1 Score: 115 bits (288), Expect = 7.900e-27
Identity = 56/118 (47.46%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   55 TSAVVEMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            T+     +I R+ R +++ E+  + N   SI  D  FVS +   +R      P+ ANLR GLWY  ++DG CYFKSTDGH+G WSF+  R+N+H+A  AA  GGCF+VD+TR GKRFP
Sbjct:    5 TNPPANENIYRVTRRIKKTEQT-IYNALRSIHDDSLFVSEIRHLWRE----LPLLANLRCGLWYSSDFDGTCYFKSTDGHNGNWSFNTGRMNLHVAMLAAERGGCFIVDATRKGKRFP 117          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A8HVT9_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HVT9_CHLRE)

HSP 1 Score: 108 bits (271), Expect = 1.560e-25
Identity = 54/111 (48.65%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   62 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            SI ++ R +++++ + + N   S+  D  FVS +   Y       P+ ANLR GLWY ++ DG CYFKSTDGH+G WSFS TRLN+H+A  AA  GG  +VD+TR GKRFP
Sbjct:    4 SIWKVTRQLKKEQLS-LYNCLASVLSDAAFVSEIRALYP----TLPLLANLRCGLWYARQPDGTCYFKSTDGHNGNWSFSCTRLNLHVAEVAARQGGVIIVDATRKGKRFP 109          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: B8LR66_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LR66_PICSI)

HSP 1 Score: 110 bits (276), Expect = 3.520e-25
Identity = 55/111 (49.55%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   62 SIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            SI ++ R ++R +++ + N   SI  D  FV+ +    RR   + P+ ANLR GLWY   +D  CYFKSTDGH+G WSF+ TRLNIH+A  A   GGC +VD+TR GKRFP
Sbjct:    9 SIYKVCRTIKRMDQS-LYNALRSIYRDSLFVAEI----RRLWPDLPLVANLRCGLWYSSHFDATCYFKSTDGHAGNWSFNPTRLNIHVATIAVEKGGCIIVDATRKGKRFP 114          
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Match: A0A7N2KWZ3_QUELO (Rit1_C domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KWZ3_QUELO)

HSP 1 Score: 107 bits (268), Expect = 4.140e-25
Identity = 54/113 (47.79%), Postives = 70/113 (61.95%), Query Frame = 0
Query:   60 EMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYRRHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLACAAASAGGCFVVDSTRSGKRFP 172
            ++SI R  R ++R E N + N   SI  D  FV  +   +     + P+ ANLR GLWY  ++   CYFKSTDGH+  WSFS +RLN+H+A  A   GGC +VDSTR GKRFP
Sbjct:   10 KLSIYRAARSIKRRE-NTVYNALRSIYEDSIFVGEISQLWP----DLPLLANLRCGLWYSPKFHSTCYFKSTDGHNNNWSFSTSRLNLHVALLAGQKGGCIIVDSTRRGKRFP 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5103.12396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7K1_ECTSI7.090e-4581.93Rit1_C domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YSK0_9STRA3.700e-3754.78Initiator tRNA phosphoribosyl transferase-domain-c... [more]
A0A1Y1HXV4_KLENI2.710e-2854.46Initiator tRNA phosphoribosyl transferase family p... [more]
A0A0D2LNS3_9CHLO3.020e-2852.73tRNA A64-2'-O-ribosylphosphate transferase (Fragme... [more]
A0A7S3UNI5_HETAK2.930e-2750.46Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A388K2T9_CHABU5.980e-2750.45Ig-like domain-containing protein n=1 Tax=Chara br... [more]
A0A2R6XUT9_MARPO7.900e-2747.46Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A8HVT9_CHLRE1.560e-2548.65Predicted protein (Fragment) n=1 Tax=Chlamydomonas... [more]
B8LR66_PICSI3.520e-2549.55Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A7N2KWZ3_QUELO4.140e-2547.79Rit1_C domain-containing protein n=1 Tax=Quercus l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033449Rit1, N-terminal domainPFAMPF17184Rit1_Ccoord: 74..172
e-value: 5.4E-32
score: 111.3
IPR007306tRNA A64-2'-O-ribosylphosphate transferasePANTHERPTHR31811FAMILY NOT NAMEDcoord: 60..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5103contigH-paniculata_contig5103:2044..9209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5103.12396.1mRNA_H-paniculata_contig5103.12396.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5103 2026..9209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5103.12396.1 ID=prot_H-paniculata_contig5103.12396.1|Name=mRNA_H-paniculata_contig5103.12396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=172bp
MAAGTPTYDNDIAHAAVDDAENAAYDYRNSKREMDIVEPSTGACNSTVDA
SYYATSAVVEMSIGRLVRDVRRDERNDMLNRFLSIDMDEQFVSALVDTYR
RHGCNYPVFANLRNGLWYRKEWDGACYFKSTDGHSGRWSFSYTRLNIHLA
CAAASAGGCFVVDSTRSGKRFP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033449Rit1_N
IPR007306Rit1