mRNA_H-paniculata_contig5094.12382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI) HSP 1 Score: 265 bits (677), Expect = 3.760e-77 Identity = 138/174 (79.31%), Postives = 156/174 (89.66%), Query Frame = 2
Query: 176 AGPSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGID-DISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLARK 694
A P+AAEL+RQA VPQ+M++MRVAN+ LC L+ATAVL L+G D++ AVLACYL AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGV+CFSL + +A+VAG LMM+NAVFNF+VI PEFE+DLQR+DLESEGRDYLRANRGALAQAG EFARNNPDLARK
Sbjct: 38 AAPTAAELERQAKVPQLMIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARK 211
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 216 bits (550), Expect = 3.480e-58 Identity = 118/315 (37.46%), Postives = 179/315 (56.83%), Query Frame = 2
Query: 1076 LPPGKKWLPNGLGLKLAEQFRVGYQFPRQLWARLREQLDHGNTLSLMLALSNGRPSDFTPRKHATIPRANAANRTLTLDQLSVKLAKIGLFTGSSKLE*WLKEMGATRVKRRITPSLSLTHREPRRLD--PGQAARSCVTFRSDIQVIHMDEAWFYIIRDRDRVSMFPGEERVGSTQVQHKCHIPKVMFICAVSRPDLSRDFDGKIGIWRVCFIKQVQRNSAR-------------------RER----RQQHEFDMTVGAEWCQEWYKDSFLFALKENIPWLEGEEVVAQQDRATPNTGKDTP*KLNKTREGRG 1945
+ PG +P G+ + E++ VG ++P +LW R++ Q+D+ L L +GRPS TP K A + N+ NR+ TL Q+S +L +GL G + W ++GA + RI PSLS + R+D + + V+H+DE+WFY++R++++V +F GE+ G +V H+ H+PK+M I A +RPD + DFDGKIGIWR+C I+ QR+S + R R ++++EFD T+ AEW ++WY D L A+KE +PWL + VV QQD A+P+TGK P LN RG
Sbjct: 9 IQPGFSRIPKGVLDPICERYGVGKKYPSELWKRVKTQIDNTQELDLSNEERSGRPSLLTPSKIAALKTVNSQNRSSTLRQVSDQLTDLGLEFGKDTVRRWFSKLGAAKKAGRIKPSLSDAQKR-HRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARG 322
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.930e-47 Identity = 86/155 (55.48%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 224 MMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLA 688
M++ R+ NM LCV LSATAVL L+G+ + + VLA YLFAF+CILCCFETH+ +A A+NFGFLYNAKGRA+FL+FVG++CFS G++L +++G+ M+ +++FNF+VI PE + QR+DLES RD++R N+GA+A+ G FA+NNP A
Sbjct: 1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQA 154
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA) HSP 1 Score: 131 bits (329), Expect = 7.220e-30 Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = 2
Query: 218 PQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSA--VLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLAR 691
P ++++MRVAN LC+ +SA AVLT++ + A VLA Y+ AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FLIFVGV+CFSLG + VAG M+ NA+FN V+C P++ + E E +++ N G LA+ GA L+R
Sbjct: 80 PPLVIYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKGARGPHRRSSLSR 237
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH) HSP 1 Score: 121 bits (303), Expect = 2.050e-27 Identity = 68/157 (43.31%), Postives = 101/157 (64.33%), Query Frame = 2
Query: 278 TAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQ-------AGAEFARNNPDLARK--V*MYTSCVS 721
T++L ++ ++ VLACY+ FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F+IF+G I FS ++ + G+ M+ NA FN + + P++E D+QR+D +SE +DYL +N Q A E R NP++AR+ MYT+ S
Sbjct: 4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQGTQAMYTAVAS 158
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.130e-25 Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = 2
Query: 188 AAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRD------------YLRANR---GALAQAGAEFARNNPDLA 688
A E + + + +++MR+AN+ + V + A+ T + +S+AV+A Y+ F C++CCFETHLK V+ IA NFGF+YNAKGR +F+I + +C +L NV + G LM A++N +VIC +PE+ + Q D + E + Y++ N A+A AGA++A NNP++A
Sbjct: 79 APETGGKTTLSKKLLYMRLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTL-NVFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVA 259
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A6U4HF89_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HF89_9STRA) HSP 1 Score: 102 bits (255), Expect = 4.020e-20 Identity = 56/151 (37.09%), Postives = 91/151 (60.26%), Query Frame = 2
Query: 233 WMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPE-FEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPD 682
+MRV N++L + A A++ L+ D++ V+ Y F FS ++CCFETH K VA I NFGF+Y+A GR F+IFVG++C+SLG ++ ++AG LM++NA F+++ P F ++L+ + + + A+ A NNP+
Sbjct: 98 YMRVVNVILTALICAAAIIKLLASPDLALGVICLYAFGFSVLICCFETHFKQVALLIQDNFGFMYDATGRFFFMIFVGILCWSLG-IIGYIAGALMIVNACVGFYIMYKYPHVFTEELESFEE-------------TMGKHAAQAAANNPE 234
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.210e-19 Identity = 49/157 (31.21%), Postives = 94/157 (59.87%), Query Frame = 2
Query: 212 NVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPD 682
++P+++++MR+AN+ L + +AV + + +S+ ++ Y+ F C+ CC+ETHLK V+ IA NFGFLYNAK R +F++ + +C++L N++ + L + N +V+ +P ++ ++ DL +G + ++ +Q +AR NPD
Sbjct: 86 DLPKLILYMRLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTL-NIIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETIQ---DMASQYAVSYARENPD 238
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.590e-18 Identity = 67/160 (41.88%), Postives = 90/160 (56.25%), Query Frame = 2
Query: 218 PQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLARKV 697
P ++++MRVAN LC+ +SA AVLT++ + A A ++ AF +VAK IA NFGFLY+AK RA FLIFVGV+CFSLG + VAG M+ NA+FN V+C P++ + E E A+F + NP LARKV
Sbjct: 80 PPLVIYMRVANFALCILMSAAAVLTVIVP---AGATPASWVLAF----------YVLVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEA---------------AQFMQRNPGLARKV 210
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2XJA4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA4_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.100e-14 Identity = 49/163 (30.06%), Postives = 91/163 (55.83%), Query Frame = 2
Query: 182 PSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFAR 670
PSA LQ + ++PQ++++MR+ANM + + L A +++ ++ IS+ +LA Y F ++CC ET LK + IA NFGFL++A R F + + I ++ N+ + + + A+FN +V+ P + K ++ E + R + +R QA ++ +
Sbjct: 37 PSARALQDEKDLPQVILFMRLANMGIAIALVACSIVKMMSFPSISNWILAVYATLFGLLICCLETQLKFLRVVIAVNFGFLFSAPWRFFFYLLLASITWAYNNLFGKIVAIAIAATALFNTYVLFRYPGYRKLREKIAEEEDKRIEAKISREVKKQAVSQIMK 199 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5094.12382.1 >prot_H-paniculata_contig5094.12382.1 ID=prot_H-paniculata_contig5094.12382.1|Name=mRNA_H-paniculata_contig5094.12382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp MPPPIPGQPAGPSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVback to top mRNA from alignment at H-paniculata_contig5094:2025..12522- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5094.12382.1 ID=mRNA_H-paniculata_contig5094.12382.1|Name=mRNA_H-paniculata_contig5094.12382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10498bp|location=Sequence derived from alignment at H-paniculata_contig5094:2025..12522- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5094:2025..12522- >mRNA_H-paniculata_contig5094.12382.1 ID=mRNA_H-paniculata_contig5094.12382.1|Name=mRNA_H-paniculata_contig5094.12382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig5094:2025..12522- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |