prot_H-paniculata_contig5094.12382.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5094.12382.1
Unique Nameprot_H-paniculata_contig5094.12382.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length184
Homology
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 4.860e-88
Identity = 138/174 (79.31%), Postives = 156/174 (89.66%), Query Frame = 0
Query:   10 AGPSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGID-DISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLARK 182
            A P+AAEL+RQA VPQ+M++MRVAN+ LC  L+ATAVL L+G   D++ AVLACYL AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGV+CFSL + +A+VAG LMM+NAVFNF+VI   PEFE+DLQR+DLESEGRDYLRANRGALAQAG EFARNNPDLARK
Sbjct:   38 AAPTAAELERQAKVPQLMIYMRVANIALCGILAATAVLKLIGAGVDVAGAVLACYLCAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARK 211          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.920e-54
Identity = 86/155 (55.48%), Postives = 120/155 (77.42%), Query Frame = 0
Query:   26 MMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLA 180
            M++  R+ NM LCV LSATAVL L+G+ +  + VLA YLFAF+CILCCFETH+  +A   A+NFGFLYNAKGRA+FL+FVG++CFS G++L +++G+ M+ +++FNF+VI   PE +   QR+DLES  RD++R N+GA+A+ G  FA+NNP  A
Sbjct:    1 MVILTRLINMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQNQ-QRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQA 154          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.750e-34
Identity = 77/162 (47.53%), Postives = 104/162 (64.20%), Query Frame = 0
Query:   22 NVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSA--VLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLAR 181
              P ++++MRVAN  LC+ +SA AVLT++     + A  VLA Y+ AFSC+LCCFE +L+ VAK IA NFGFLY+AK RA FLIFVGV+CFSLG +   VAG  M+ NA+FN  V+C  P++  +      E E   +++ N G LA+ GA        L+R
Sbjct:   78 QTPPLVIYMRVANFALCILMSAAAVLTVIVPAGATPASWVLAFYVLAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPG-LARKGARGPHRRSSLSR 237          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH)

HSP 1 Score: 120 bits (300), Expect = 5.920e-31
Identity = 64/146 (43.84%), Postives = 96/146 (65.75%), Query Frame = 0
Query:   44 TAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQ-------AGAEFARNNPDLARK 182
            T++L ++     ++ VLACY+  FSC+LCCFETHLK V+K IA NFGF+Y+AK R++F+IF+G I FS  ++   + G+ M+ NA FN + +   P++E D+QR+D +SE +DYL +N     Q       A  E  R NP++AR+
Sbjct:    4 TSLLAVLTTQSATTGVLACYVVVFSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQ 147          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2WC07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WC07_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.300e-29
Identity = 68/182 (37.36%), Postives = 109/182 (59.89%), Query Frame = 0
Query:   14 AAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRD------------YLRANR---GALAQAGAEFARNNPDLA 180
            A E   +  + + +++MR+AN+ + V +   A+ T +    +S+AV+A Y+  F C++CCFETHLK V+  IA NFGF+YNAKGR +F+I +  +C +L NV   + G LM   A++N +VIC +PE+  + Q  D + E  +            Y++ N     A+A AGA++A NNP++A
Sbjct:   79 APETGGKTTLSKKLLYMRLANVAVAVLMVTAALTTFITSSSLSTAVIALYISCFGCLVCCFETHLKQVSIIIADNFGFMYNAKGRFIFMILMATLCMTL-NVFGQITGGLMYGVALYNLYVICMHPEYGSETQELDRKGENPNSIQHVAQSYATGYVQNNPDQVAAVASAGAQWAYNNPEVA 259          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A6U4HF89_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4HF89_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.960e-23
Identity = 56/152 (36.84%), Postives = 92/152 (60.53%), Query Frame = 0
Query:   28 VWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPE-FEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPD 178
            ++MRV N++L   + A A++ L+   D++  V+  Y F FS ++CCFETH K VA  I  NFGF+Y+A GR  F+IFVG++C+SLG ++ ++AG LM++NA   F+++   P  F ++L+  +               + +  A+ A NNP+
Sbjct:   97 LYMRVVNVILTALICAAAIIKLLASPDLALGVICLYAFGFSVLICCFETHFKQVALLIQDNFGFMYDATGRFFFMIFVGILCWSLG-IIGYIAGALMIVNACVGFYIMYKYPHVFTEELESFEE-------------TMGKHAAQAAANNPE 234          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2MMX0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMX0_9STRA)

HSP 1 Score: 100 bits (250), Expect = 1.330e-22
Identity = 49/157 (31.21%), Postives = 94/157 (59.87%), Query Frame = 0
Query:   22 NVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPD 178
            ++P+++++MR+AN+ L   +  +AV + +    +S+ ++  Y+  F C+ CC+ETHLK V+  IA NFGFLYNAK R +F++ +  +C++L N++  +   L +     N +V+  +P ++  ++  DL  +G + ++      +Q    +AR NPD
Sbjct:   86 DLPKLILYMRLANVALSALMITSAVTSALMSASLSNFIIGAYVSCFGCLFCCYETHLKQVSVFIADNFGFLYNAKARCLFMMLIATLCYTL-NIIGMITAFLCVAAVCLNVYVLFKHPHYQDQIKNDDLHGKGPETIQ---DMASQYAVSYARENPD 238          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.740e-22
Identity = 67/162 (41.36%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   22 NVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEFARNNPDLARKV 183
              P ++++MRVAN  LC+ +SA AVLT++     + A  A ++ AF            +VAK IA NFGFLY+AK RA FLIFVGV+CFSLG +   VAG  M+ NA+FN  V+C  P++  +      E E                A+F + NP LARKV
Sbjct:   78 QTPPLVIYMRVANFALCILMSAAAVLTVIVP---AGATPASWVLAF----------YVLVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEA---------------AQFMQRNPGLARKV 210          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: A0A7S2XJA4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJA4_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.200e-17
Identity = 49/161 (30.43%), Postives = 90/161 (55.90%), Query Frame = 0
Query:   12 PSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQAGAEF 172
            PSA  LQ + ++PQ++++MR+ANM + + L A +++ ++    IS+ +LA Y   F  ++CC ET LK +   IA NFGFL++A  R  F + +  I ++  N+   +  + +   A+FN +V+   P + K  ++   E + R   + +R    QA ++ 
Sbjct:   37 PSARALQDEKDLPQVILFMRLANMGIAIALVACSIVKMMSFPSISNWILAVYATLFGLLICCLETQLKFLRVVIAVNFGFLFSAPWRFFFYLLLASITWAYNNLFGKIVAIAIAATALFNTYVLFRYPGYRKLREKIAEEEDKRIEAKISREVKKQAVSQI 197          
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Match: B8C7D3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7D3_THAPS)

HSP 1 Score: 84.7 bits (208), Expect = 7.030e-17
Identity = 51/157 (32.48%), Postives = 87/157 (55.41%), Query Frame = 0
Query:   12 PSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLVGIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDLESEGRDYLRANRGALAQA 168
            P+A +   + N+P+++++MR+ NMV    L   ++ +L  I  +   VLA Y   F  ++CC E ++  + + IA+NFGFLYN   R +F + +G++ +S G +L  VA   +M  ++ N +V+C  P ++  L+    E E R    ANR A   A
Sbjct:   56 PTATKESGENNLPKIVLFMRLGNMVAAGLLVFGSIGSLTNIFSLPVMVLAGYGICFGSLICCLEINISFIRQPIASNFGFLYNPFYRLIFYVLMGMVAWSFGTLLGIVASGALMALSLINTYVLCRYPGYKAALKEASDEEEKRLKRGANRAARKHA 212          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5094.12382.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LTB9_ECTSI4.860e-8879.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CFZ2_9STRA4.920e-5455.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TT71_9STRA1.750e-3447.53Golgi apparatus membrane protein TVP15 n=1 Tax=Nan... [more]
A0A482T2R9_9ARCH5.920e-3143.84Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S2WC07_9STRA1.300e-2937.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U4HF89_9STRA1.960e-2336.84Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A7S2MMX0_9STRA1.330e-2231.21Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A4D9D7K6_9STRA6.740e-2241.36Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2XJA4_9STRA4.200e-1730.43Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C7D3_THAPS7.030e-1732.48Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 29..132
e-value: 1.8E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 19..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..183
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..78
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 55..74
NoneNo IPR availableTMHMMTMhelixcoord: 100..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5094contigH-paniculata_contig5094:7455..12374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5094.12382.1mRNA_H-paniculata_contig5094.12382.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5094 2025..12522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5094.12382.1 ID=prot_H-paniculata_contig5094.12382.1|Name=mRNA_H-paniculata_contig5094.12382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp
MPPPIPGQPAGPSAAELQRQANVPQMMVWMRVANMVLCVFLSATAVLTLV
GIDDISSAVLACYLFAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAV
FLIFVGVICFSLGNVLAWVAGVLMMINAVFNFWVICTNPEFEKDLQRRDL
ESEGRDYLRANRGALAQAGAEFARNNPDLARKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15