prot_H-paniculata_contig50885.12373.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: Q9ZQK0_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9ZQK0_ARATH) HSP 1 Score: 58.2 bits (139), Expect = 1.700e-6 Identity = 33/92 (35.87%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 65 DSDGLEYRKVGGMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGK 156
+S G Y + ++ I D+GA+ HM DS L+ N + G+V +A+G+R+P++GVG L L FD K ++A ++P + +LLS+ K
Sbjct: 298 ESSGKSYHALSSLKPLIIDSGASHHMISDSKLISNIEPALGNVVIANGDRIPVKGVGDLDL---FD------KSSKAFYMPTFTSNLLSVKK 380
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: A0A8D9D973_BRACM ((field mustard) hypothetical protein (Fragment) n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9D973_BRACM) HSP 1 Score: 57.8 bits (138), Expect = 1.970e-6 Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 0
Query: 36 QVADEDAYEFIAAYIASTSTTGKEEVLSVDSDGLEYRKVGGMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGKFA-DFGHEYRCSREGLRI-NLKTGRVL 181
+V ED EF+ Y+ + +TT ++ G + + I D+GA+ HM D L+ + ++ G V +A+G+R+PIEGVG L L FD + + A ++P + +LLS+ K D G + + + +LKTGRV+
Sbjct: 272 RVTKEDWDEFVK-YVYALATTRRQ--------GAPAKASTSNKPIIVDSGASHHMISDRSLMSDVKKATGGVMIANGDRIPIEGVGKLKL---FDKD------SDAFYMPQFASNLLSVRKATIDLGCQVVFRPDDVEFQDLKTGRVI 401
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: UPI000BBEF31C (uncharacterized protein LOC111199942 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBEF31C) HSP 1 Score: 57.4 bits (137), Expect = 2.830e-6 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query: 76 GMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGKFADFGHEY 164
G++ I D+GA+ HM D L+ N + GHV +A+G+R+PI GVG L L F DS+ A ++P + +LLS+ K +D G EY
Sbjct: 395 GIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSK--------ALYMPEFASNLLSV-KRSDNGGEY 473
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: UPI000BBE966B (uncharacterized protein LOC106448712 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE966B) HSP 1 Score: 57.4 bits (137), Expect = 2.960e-6 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query: 76 GMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGKFADFGHEY 164
G++ I D+GA+ HM D L+ N + GHV +A+G+R+PI GVG L L F DS+ A ++P + +LLS+ K +D G EY
Sbjct: 410 GIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSK--------ALYMPEFTSNLLSV-KRSDNGGEY 488
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: UPI000BBECC90 (uncharacterized protein LOC106373021 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI000BBECC90) HSP 1 Score: 57.4 bits (137), Expect = 2.990e-6 Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = 0
Query: 76 GMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGKFADFGHEY 164
G++ I D+GA+ HM D L+ N + GHV +A+G+R+PI GVG L L F DS+ A ++P + +LLS+ K +D G EY
Sbjct: 409 GIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSK--------ALYMPEFTSNLLSV-KRSDNGGEY 487
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: UPI000539F602 (uncharacterized protein LOC104779247 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000539F602) HSP 1 Score: 57.0 bits (136), Expect = 3.450e-6 Identity = 48/161 (29.81%), Postives = 77/161 (47.83%), Query Frame = 0
Query: 2 RCFICRSKDHLRRECPNVYCGRCGQRGHDLYACLQVADED--AYEFIAAYIASTSTTGKEEVLSV------DSDGLEYRKVGGMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSL 154
RC+I HLR P CG G R H + A+ + A + +A+TS ++ L D+ G Y + + I D+GA+ HM DS L+ + G+V +A+G ++P++G+G L L FD K T+A ++P + LLS+
Sbjct: 48 RCWILHP--HLRANRPMNNCG--GPRAHQVTVEPSTAEPNQRASDVNGTALAATSDLVRKSDLDALIKALKDASGNSYLALNQTKPLIVDSGASHHMISDSKLISELKPAVGNVIIANGEKVPVKGIGDLKL---FD------KTTKAFYMPSFTSKLLSV 195
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: A0A178U605_ARATH (ULP_PROTEASE domain-containing protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178U605_ARATH) HSP 1 Score: 56.2 bits (134), Expect = 7.730e-6 Identity = 32/94 (34.04%), Postives = 54/94 (57.45%), Query Frame = 0
Query: 61 VLSVDSDGLEYRKVGGMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSL 154
++S+ G+ + + D+GA+ HM +S+LL N + GHV +A+G+++PIEG+G L L F DS+ A F+P + +LLS+
Sbjct: 323 IVSLKESGITFSSQTSSSSIVIDSGASHHMISNSNLLDNIEPALGHVIIANGDKVPIEGIGNLKL-FNKDSK--------AFFMPKFTSNLLSV 407
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: A0A1J3DSB6_NOCCA (Uncharacterized protein (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DSB6_NOCCA) HSP 1 Score: 52.4 bits (124), Expect = 1.280e-5 Identity = 29/76 (38.16%), Postives = 48/76 (63.16%), Query Frame = 0
Query: 81 ICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGK 156
I D+GA+ HM D +L+ + + GHV +A+G+++PI+G+G L L FD E +QA ++P + +LLS+ K
Sbjct: 33 IVDSGASHHMISDLNLIKDIKPALGHVSIANGDQIPIKGIGNLKL---FDKE------SQAFYMPSFTSNLLSVKK 99
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: Q9FWZ5_ARATH (Putative retroelement polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9FWZ5_ARATH) HSP 1 Score: 55.5 bits (132), Expect = 1.390e-5 Identity = 32/94 (34.04%), Postives = 54/94 (57.45%), Query Frame = 0
Query: 61 VLSVDSDGLEYRKVGGMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSL 154
++S+ G+ + + D+GA+ HM +S+LL N + GHV +A+G+++PIEG+G L L F DS+ A F+P + +LLS+
Sbjct: 310 IVSLKESGITFSSQTSSGSIVIDSGASHHMISNSNLLDNIEPALGHVIIANGDKVPIEGIGNLKL-FNKDSK--------AFFMPKFTSNLLSV 394
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Match: UPI0006AB2FB3 (uncharacterized protein LOC106407804 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AB2FB3) HSP 1 Score: 55.1 bits (131), Expect = 1.630e-5 Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 0
Query: 76 GMEIWICDNGATKHMTHDSDLLFNYQECDGHVRLADGNRLPIEGVGMLFLQFRFDSEIVLMKLTQASFIPLLSHHLLSLGKFAD 159
G++ I D+GA+ HM D L+ N + GHV +A+G+R+PI GVG L L F DS+ A ++P + +LLS+ + D
Sbjct: 414 GIKPLIIDSGASHHMISDDSLIKNIEPAHGHVMIANGDRIPIRGVGDLKL-FNKDSK--------ALYMPEFTSNLLSVKRCTD 488 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50885.12373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig50885.12373.1 ID=prot_H-paniculata_contig50885.12373.1|Name=mRNA_H-paniculata_contig50885.12373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bpback to top |