prot_H-paniculata_contig5049.12312.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE) HSP 1 Score: 352 bits (903), Expect = 1.420e-112 Identity = 229/449 (51.00%), Postives = 270/449 (60.13%), Query Frame = 0
Query: 26 FALEQQEVAAPPWGGRWLTSSAVLTDVQTVSPASELRHAT-GDDGQSDQ-KKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVG-----LPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQA-AYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKRGQ 466
F+ E +E A P W WL +S + + S R GD +DQ KKKLFVGMAPK+AYE DYR VF PFGT +DIYVIRDRNGFSKGCAFV+Y+ V+SA AIEALHDKYIMPGGFRTLVV +ADDRRGP ++A +T D VG L L + GS S V G + + V + ++PQA A A+ AP P S PSS ++ G+ Y F G +PP GTYVYYP +P+SS +A + KPH SV S A+ G + +G A+ Q D G +R+ R G P E GRRWAKQ VGP+GANLFVYYLPGSL+DADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P A+AAI+ MNGFFIG KRLKVVRKRGQ
Sbjct: 12 FSFEHRETA-PTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVG-----------GSIPSFGNLVGQ--NRSTVAAPQAGATAV----APTIAPGSRPSSG-LLSGMPY-FLCGGNPPQGTYVYYPY-VPSSSVQHDTGLSVAPVGIGAKPHHAFSVGSPAV---------GNNDRCE-------LG-ARGAQEDGYTG----------DRTVRKFGT-GGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQ 411
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI) HSP 1 Score: 345 bits (886), Expect = 3.190e-112 Identity = 228/443 (51.47%), Postives = 267/443 (60.27%), Query Frame = 0
Query: 21 VTRADFALEQQEVAAPPWGGRWLTSSAVLTDVQTVSPASELRHAT-GDDGQSDQ-KKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPAS--SPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVG-KPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRL 458
+TR F+ E +E A PPW WL +S + + T S R GD +DQ KKKLFVGMAPK+AYE DYR VF PFGT +DIYVIRDRNGFSKGCAFV+Y+ V+SA AIEALHDK+IMPGGFRTLVV +ADDRRGP ++A +T D VG G F + PS S SGG P + +V GQ ++ +PQA AP P S PSS ++ G+ Y F G +PP GTYVYYP SSS H T A +G KPH SV S A+ G + +G A+ Q D G +R+ R G P E GRRWAKQ VGP+GANLFVYYLPGSL+DADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P A+AAI+ MNGFFIG K L
Sbjct: 4 ITRGPFSYEHRETA-PPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSG--------DGLFRALSR-PSSFMGSDSGGGGTIPS-LGNVVGQNRSTVTAPQAGATA---FAPTVAPGSGPSSG-LLSGMPY-FLCGGNPPQGTYVYYP--YVPSSSVQHDTGSSAAPAGIGAKPHHAFSVGSPAV---------GNNDRCE-------LG-ARGAQEDGYTG----------DRTVRKFGT-GGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.600e-61 Identity = 160/407 (39.31%), Postives = 196/407 (48.16%), Query Frame = 0
Query: 68 DGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGS-----SPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMG-----LAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
+GQ++Q+ KLFVGMAPK+A E + R VFAP+GT+ +I+VIR+++G +KGCAFVKY QSA AIEALH++Y M GG R LVV AD++RG + A G G+ SP W GH PG A A Y P P P S M+ G+ Y + G +P G+YVYYP G P G P + GG H SP+ G + PAE GP GANLF+Y+LP LSDADLATAFAPFG VLSAKVY DR +GESKGFGFVSY+ P+HA+AAIA+MNGF IG+KRLKV KR
Sbjct: 124 EGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAA-----------------------GRLGGLIGSPGRHGSGPHPEAGGWMGH----PG---AGGQGAGYPYPMPGPPM--------SPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAP------------------GYPPQ-----------------PGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAE----------GPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKR 447
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S0C1D5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1D5_9STRA) HSP 1 Score: 165 bits (417), Expect = 1.830e-42 Identity = 137/389 (35.22%), Postives = 182/389 (46.79%), Query Frame = 0
Query: 81 MAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHS-TATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNR---GMGIISNPAEEGRRWAKQP-VGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
M + A E+ R +FAPFG I +IY+IR+ +G +KGCAF+K+ +SA AIE L+DK +M G R L+V AD + + T + P G P Y P + + + H VP IP PSA + QY + G+ PPHG Y+Y P S + TA A P + P G Q +++ R++ + A+ SN+ G +I A G A +P GPSGANLF+Y+LP L+DADLATAF PFG V+SAKVY D+ TGESKGFGFVSY + A+AAI +MNGF IG+KRLKV KR
Sbjct: 1 MTSRNADESAIRELFAPFGEIREIYIIRNADGSNKGCAFLKFQHRESALSAIEVLNDKIVMEGATRPLIVKFADTKAQRRARTGVGPGRIGMPPTGHP-------------NPYYMPHSNPAML---YQHYQQHGHQVP-------------IPVPSA-------LGGQYQQSAYSQYPAAAGT-PPHG-YMYQHMQAPPPSPYGYPTA----XXXXXXXXXXXXXXXXATPPQQTL---------------PNAGHTQTAS--SLQSRQQAPVLQAYAVSNQRQDGTIVIPAAANAGGGMAPRPREGPSGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDKFTGESKGFGFVSYDSTMAAEAAIEQMNGFQIGSKRLKVQHKR 330
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.520e-42 Identity = 142/415 (34.22%), Postives = 181/415 (43.61%), Query Frame = 0
Query: 55 VSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADD--RRGP--HSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVR-GRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
V PASE SD + KLFVGM P+ E D R +F+PFG I IY+IR+ +G KGCAFVK+ +SA+ AI LH +Y M G R+LVV AD RR + A +++ G P + G V + P P Q P P A P P P + G Q G SPP G P S + + PH + + S+ A+ G+ Q G ++ + R G + + R GP+GANLF+Y+LP L+DADLATAF PFG V+SAKVY DR TGESKGFGFVSY + A+ AI +MNGF IG KRLKV KR
Sbjct: 269 VRPASE---------GSDTEVKLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYADKGYRRASRRYQAARREAYENAVMHGHP-------------------------NPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQP----------PQAGPHAEGTQ-----GPSPPMGI------SPPVSGTGQYSVGQPPQYATGAYPHGSHTPPSSQXXXXXXXXXXXXXX---XXXAAAPYGMPQGFSGGQAGPGGAHQNKPRFYGRGQNRDGQLPHATTPRPR-----EGPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKR 620
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA) HSP 1 Score: 167 bits (424), Expect = 4.670e-42 Identity = 145/434 (33.41%), Postives = 191/434 (44.01%), Query Frame = 0
Query: 42 WLTSSA-----VLTDVQTVSPAS---ELRHATGDDGQS---DQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
W +SSA VL D T + ++R A G + +Q+ KLF+GM + A E R VFA FG I +IY+IR+ +G +KGCAF+KY SA AI L++K +M G R L+V AD + + + + + G RG GH PS+P IPP + P Q + PH Y YP SSS P P + + + + + A GG S+ +P + + RG R +R G +N + GP GANLF+Y+LP L+DADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY ADAAI +MNGF IG+KRLKV KR
Sbjct: 175 WSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPG----------RGQS----------------------GHN--------------------PSSPYFIPP-----VPVYPNYQAQRAPPIGIPH-QYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFNHNQMGNHSGGGSGAQ-QPGGAPSAFEPVPNPNHAVHPS------RGSPRTSPAPGKVYQHRSDGPNTN--------TRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A448YXA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA) HSP 1 Score: 167 bits (424), Expect = 6.370e-42 Identity = 139/395 (35.19%), Postives = 179/395 (45.32%), Query Frame = 0
Query: 71 SDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQP-VGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
S Q+ KLF+GM + A E + R +FAPFG I +IY+IR+ +G SK AF++Y +A AIEALH+ +M G R L+V AD + H S + +G P G + G +PGH + G P P YA A PP +Q+ P G +Y P G P + H +P P+ S R P G QH + + KD GI NP + +P GP+GANLFVY+LP L+DADLATAF PFG V+SAKVY DR TG+SKGFGFVSY + A++AI +MNGF IGNKRLKV KR
Sbjct: 264 SVQENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPA--------GGYPGP-----------------YPGHHMPM-GPPPVGGPPHQYA-----AHMGAPPH---------QMQHYGGPYPGPGAGGQMYNPMGYPPAP---HYPSP--------HPYGGFS---------------------ERQGQGPDGGH----QHQSTHPQRMKD------------GIRGNPRHHNQSTNPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: F6WTG3_CIOIN (Uncharacterized protein n=7 Tax=Ciona intestinalis TaxID=7719 RepID=F6WTG3_CIOIN) HSP 1 Score: 164 bits (416), Expect = 6.960e-42 Identity = 141/414 (34.06%), Postives = 191/414 (46.14%), Query Frame = 0
Query: 67 DDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRT--FASPTMGLAQNVQHDTVRGRERKDLYCAFERSNR----GMGIISNPAEEGRRWA-------KQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
D + +KLFVGM K E D R +F PFGTI + ++R G SKGCAFVK Q A+ A+EALH MPG +LVV AD +R + T+ I PV L G++ G+ Y+ +V V + PG +SPQ PAAI P++AT++ + ++P G +P++ S AP+ T ++ P + + P A Y G + + R AS M AQ + V + Y A + + I +N + A K+ GP G NLF+Y+LP SDADLA F PFG V+SAKV+ DR T +SK FGFVS+ N + AAI MNGF IG KRLKV KR
Sbjct: 100 DTVSKGEDRKLFVGMLGKRQNEDDVRILFEPFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTDKERAVRRMQQMAQTYGLISPVPLQI--------GTY-GLPYAQNV---------------VPATPGWNSLASPQ----------PAAINGLAPAAATVIQQPTVIHHQHATPMSG--------VPSTPQS--PVAPLTTLNLLPPPSSATASTPEGVYPIQA--YPGTQGVAPRVPEHASTPMSYAQPQPYTVVYVPAQS--YGAPQYAPTVAPVAQSITANQLQTNALLASSTNAPQKEATGPDGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKR 465
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: UPI001E1DFD11 (CUGBP Elav-like family member 3-B isoform X1 n=6 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFD11) HSP 1 Score: 165 bits (417), Expect = 1.050e-41 Identity = 139/430 (32.33%), Postives = 190/430 (44.19%), Query Frame = 0
Query: 55 VSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIIS-----NPAEEG--RRWAKQPV----------GPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
V PA A D + + +K LFVGM K E D + +F PFG + ++ ++RD+NG SKGC+FVKY A+ AI LH MPG +LVV AD +R+ + + ++ +P+G R IR S G+ S + V GH + P + Q A+ A +AP I S+ATM P L + S+ AT + G P + L PT + + +A+ A T+ + +Y A G + + NP ++ + A P GP G NLF+Y+LP DA+LA F PFG V+SAKVY DR T +SK FGFVS+ NPA A AAI MNGF IG KRLKV KR
Sbjct: 128 VKPADSESRAERDPAKHEDRK-LFVGMLNKQQTEDDIKHLFTPFGQVEELTILRDQNGNSKGCSFVKYSNHSEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRNATDGTISRAPEPLGSITDRGLRRIR-SHQGISKSTHDTIMQQQALVAAGQGHYLT-----PVTLAQIPQAVTALAAPNGI-----STATMTPTTASLANGEST--------------------------ATTPISGAP-------PSVLSPTPVAGFPIAQNGQQEIYANGIPAYAAQ----TITNGDPSQIYTAVTPYGIGEYLTAYPTAFNPIQQALLQNAALMPTAQKEAVLTSTGPDGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYVDRATNQSKCFGFVSFDNPACAQAAIQAMNGFQIGMKRLKVQLKR 508
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: UPI001E1DD999 (CUGBP Elav-like family member 3-A isoform X7 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD999) HSP 1 Score: 162 bits (411), Expect = 1.050e-41 Identity = 137/433 (31.64%), Postives = 193/433 (44.57%), Query Frame = 0
Query: 52 VQTVSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIIS-----NPAEEG--RRWAKQPV----------GPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
+ T++ +++ A + D +KLFVGM K E D + +F PFG + ++ ++RD+NG SKGC+FVKY A+ AI LH MPG +LVV AD +R+ + + ++ +P+G R IR S G+ S + V GH + P + Q A+ A +AP I S+ATM P L + S+ AT + G P + L PT + + +A+ A T+ + +Y A G + + NP ++ + A P GP G NLF+Y+LP DA+LA F PFG V+SAKVY DR T +SK FGFVS+ NPA A AAI MNGF IG KRLKV KR
Sbjct: 20 LSTMNRPIQVKPADSESRAED--RKLFVGMLNKQQTEDDIKHLFTPFGQVEELTILRDQNGNSKGCSFVKYSNHSEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRNATDGTISRAPEPLGSITDRGLRRIR-SHQGISKSTHDTIMQQQALVAAGQGHYLT-----PVTLAQIPQAVTALAAPNGI-----STATMTPTTASLANGEST--------------------------ATTPISGAP-------PSVLSPTPVAGFPIAQNGQQEIYANGIPAYAAQ----TITNGDPSQIYTAVTPYGIGEYLTAYPTAFNPIQQALLQNAALMPTAQKEAVLTSTGPDGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYVDRATNQSKCFGFVSFDNPACAQAAIQAMNGFQIGMKRLKVQLKR 402 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig5049.12312.1 ID=prot_H-paniculata_contig5049.12312.1|Name=mRNA_H-paniculata_contig5049.12312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=468bpback to top |