prot_H-paniculata_contig5049.12312.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5049.12312.1
Unique Nameprot_H-paniculata_contig5049.12312.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length468
Homology
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE)

HSP 1 Score: 352 bits (903), Expect = 1.420e-112
Identity = 229/449 (51.00%), Postives = 270/449 (60.13%), Query Frame = 0
Query:   26 FALEQQEVAAPPWGGRWLTSSAVLTDVQTVSPASELRHAT-GDDGQSDQ-KKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVG-----LPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQA-AYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKRGQ 466
            F+ E +E A P W   WL +S  + +       S  R    GD   +DQ KKKLFVGMAPK+AYE DYR VF PFGT +DIYVIRDRNGFSKGCAFV+Y+ V+SA  AIEALHDKYIMPGGFRTLVV +ADDRRGP ++A  +T    D VG     L  L    +  GS S V            G +  +   V     +   ++PQA A A+    AP   P S PSS  ++ G+ Y F  G +PP GTYVYYP  +P+SS        +A   +  KPH   SV S A+         G  +          +G A+  Q D   G          +R+ R  G    P E GRRWAKQ VGP+GANLFVYYLPGSL+DADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P  A+AAI+ MNGFFIG KRLKVVRKRGQ
Sbjct:   12 FSFEHRETA-PTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVG-----------GSIPSFGNLVGQ--NRSTVAAPQAGATAV----APTIAPGSRPSSG-LLSGMPY-FLCGGNPPQGTYVYYPY-VPSSSVQHDTGLSVAPVGIGAKPHHAFSVGSPAV---------GNNDRCE-------LG-ARGAQEDGYTG----------DRTVRKFGT-GGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQ 411          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 3.190e-112
Identity = 228/443 (51.47%), Postives = 267/443 (60.27%), Query Frame = 0
Query:   21 VTRADFALEQQEVAAPPWGGRWLTSSAVLTDVQTVSPASELRHAT-GDDGQSDQ-KKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPAS--SPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVG-KPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRL 458
            +TR  F+ E +E A PPW   WL +S  + +  T    S  R    GD   +DQ KKKLFVGMAPK+AYE DYR VF PFGT +DIYVIRDRNGFSKGCAFV+Y+ V+SA  AIEALHDK+IMPGGFRTLVV +ADDRRGP ++A  +T    D VG           G F  +   PS    S SGG    P  + +V GQ  ++  +PQA        AP   P S PSS  ++ G+ Y F  G +PP GTYVYYP     SSS  H T   A    +G KPH   SV S A+         G  +          +G A+  Q D   G          +R+ R  G    P E GRRWAKQ VGP+GANLFVYYLPGSL+DADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P  A+AAI+ MNGFFIG K L
Sbjct:    4 ITRGPFSYEHRETA-PPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSG--------DGLFRALSR-PSSFMGSDSGGGGTIPS-LGNVVGQNRSTVTAPQAGATA---FAPTVAPGSGPSSG-LLSGMPY-FLCGGNPPQGTYVYYP--YVPSSSVQHDTGSSAAPAGIGAKPHHAFSVGSPAV---------GNNDRCE-------LG-ARGAQEDGYTG----------DRTVRKFGT-GGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 217 bits (552), Expect = 2.600e-61
Identity = 160/407 (39.31%), Postives = 196/407 (48.16%), Query Frame = 0
Query:   68 DGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGS-----SPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMG-----LAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            +GQ++Q+ KLFVGMAPK+A E + R VFAP+GT+ +I+VIR+++G +KGCAFVKY   QSA  AIEALH++Y M GG R LVV  AD++RG  + A                       G   G+  SP             W GH    PG   A    A Y  P P  P         S  M+ G+ Y  + G      +P  G+YVYYP G P                  G P +                  GG    H    SP+ G                                     + PAE          GP GANLF+Y+LP  LSDADLATAFAPFG VLSAKVY DR +GESKGFGFVSY+ P+HA+AAIA+MNGF IG+KRLKV  KR
Sbjct:  124 EGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAA-----------------------GRLGGLIGSPGRHGSGPHPEAGGWMGH----PG---AGGQGAGYPYPMPGPPM--------SPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAP------------------GYPPQ-----------------PGGPGQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAE----------GPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKR 447          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S0C1D5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1D5_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.830e-42
Identity = 137/389 (35.22%), Postives = 182/389 (46.79%), Query Frame = 0
Query:   81 MAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHS-TATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNR---GMGIISNPAEEGRRWAKQP-VGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            M  + A E+  R +FAPFG I +IY+IR+ +G +KGCAF+K+   +SA  AIE L+DK +M G  R L+V  AD +    + T        + P G P                Y P  +        + +  H   VP             IP PSA       +          QY  + G+ PPHG Y+Y     P  S   + TA                    A  P   +               P  G  Q     +++ R++  +  A+  SN+   G  +I   A  G   A +P  GPSGANLF+Y+LP  L+DADLATAF PFG V+SAKVY D+ TGESKGFGFVSY +   A+AAI +MNGF IG+KRLKV  KR
Sbjct:    1 MTSRNADESAIRELFAPFGEIREIYIIRNADGSNKGCAFLKFQHRESALSAIEVLNDKIVMEGATRPLIVKFADTKAQRRARTGVGPGRIGMPPTGHP-------------NPYYMPHSNPAML---YQHYQQHGHQVP-------------IPVPSA-------LGGQYQQSAYSQYPAAAGT-PPHG-YMYQHMQAPPPSPYGYPTA----XXXXXXXXXXXXXXXXATPPQQTL---------------PNAGHTQTAS--SLQSRQQAPVLQAYAVSNQRQDGTIVIPAAANAGGGMAPRPREGPSGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDKFTGESKGFGFVSYDSTMAAEAAIEQMNGFQIGSKRLKVQHKR 330          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.520e-42
Identity = 142/415 (34.22%), Postives = 181/415 (43.61%), Query Frame = 0
Query:   55 VSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADD--RRGP--HSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVR-GRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            V PASE          SD + KLFVGM P+   E D R +F+PFG I  IY+IR+ +G  KGCAFVK+   +SA+ AI  LH +Y M G  R+LVV  AD   RR    +  A    +++    G P                         + G V + P      P Q P   P    A P P          P +     G Q     G SPP G         P S +  +             PH + +  S+                     A+   G+ Q         G   ++    + R     G + +      R      GP+GANLF+Y+LP  L+DADLATAF PFG V+SAKVY DR TGESKGFGFVSY +   A+ AI +MNGF IG KRLKV  KR
Sbjct:  269 VRPASE---------GSDTEVKLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYADKGYRRASRRYQAARREAYENAVMHGHP-------------------------NPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQP----------PQAGPHAEGTQ-----GPSPPMGI------SPPVSGTGQYSVGQPPQYATGAYPHGSHTPPSSQXXXXXXXXXXXXXX---XXXAAAPYGMPQGFSGGQAGPGGAHQNKPRFYGRGQNRDGQLPHATTPRPR-----EGPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKR 620          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A7S1BYN5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.670e-42
Identity = 145/434 (33.41%), Postives = 191/434 (44.01%), Query Frame = 0
Query:   42 WLTSSA-----VLTDVQTVSPAS---ELRHATGDDGQS---DQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            W +SSA     VL D  T +      ++R A G +      +Q+ KLF+GM  + A E   R VFA FG I +IY+IR+ +G +KGCAF+KY    SA  AI  L++K +M G  R L+V  AD +    +     + + +   G          RG                        GH                     PS+P  IPP       + P  Q   +     PH  Y  YP     SSS      P         P  +  + + +   + A    GG  S+     +P   +  +      RG  R          +R  G  +N         +   GP GANLF+Y+LP  L+DADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY     ADAAI +MNGF IG+KRLKV  KR
Sbjct:  175 WSSSSAERVQEVLHDQLTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPG----------RGQS----------------------GHN--------------------PSSPYFIPP-----VPVYPNYQAQRAPPIGIPH-QYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFNHNQMGNHSGGGSGAQ-QPGGAPSAFEPVPNPNHAVHPS------RGSPRTSPAPGKVYQHRSDGPNTN--------TRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGFGFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: A0A448YXA3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 6.370e-42
Identity = 139/395 (35.19%), Postives = 179/395 (45.32%), Query Frame = 0
Query:   71 SDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIISNPAEEGRRWAKQP-VGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            S Q+ KLF+GM  + A E + R +FAPFG I +IY+IR+ +G SK  AF++Y    +A  AIEALH+  +M G  R L+V  AD +   H     S  +    +G P         G + G                  +PGH   + G  P   P   YA     A    PP           +Q+       P  G  +Y P G P +    H  +P         P+   S                      R    P  G     QH +   +  KD            GI  NP    +    +P  GP+GANLFVY+LP  L+DADLATAF PFG V+SAKVY DR TG+SKGFGFVSY +   A++AI +MNGF IGNKRLKV  KR
Sbjct:  264 SVQENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPA--------GGYPGP-----------------YPGHHMPM-GPPPVGGPPHQYA-----AHMGAPPH---------QMQHYGGPYPGPGAGGQMYNPMGYPPAP---HYPSP--------HPYGGFS---------------------ERQGQGPDGGH----QHQSTHPQRMKD------------GIRGNPRHHNQSTNPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGFGFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: F6WTG3_CIOIN (Uncharacterized protein n=7 Tax=Ciona intestinalis TaxID=7719 RepID=F6WTG3_CIOIN)

HSP 1 Score: 164 bits (416), Expect = 6.960e-42
Identity = 141/414 (34.06%), Postives = 191/414 (46.14%), Query Frame = 0
Query:   67 DDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRT--FASPTMGLAQNVQHDTVRGRERKDLYCAFERSNR----GMGIISNPAEEGRRWA-------KQPVGPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            D     + +KLFVGM  K   E D R +F PFGTI +  ++R   G SKGCAFVK    Q A+ A+EALH    MPG   +LVV  AD   +R        + T+  I PV L          G++ G+ Y+ +V               V + PG    +SPQ          PAAI    P++AT++     +    ++P  G        +P++  S    AP+ T  ++  P    +     + P  A  Y G +  + R    AS  M  AQ   +  V    +   Y A + +         I +N  +     A       K+  GP G NLF+Y+LP   SDADLA  F PFG V+SAKV+ DR T +SK FGFVS+ N   + AAI  MNGF IG KRLKV  KR
Sbjct:  100 DTVSKGEDRKLFVGMLGKRQNEDDVRILFEPFGTIEECTILRTPEGQSKGCAFVKLSCHQEAKSAMEALHGSQTMPGASSSLVVKFADTDKERAVRRMQQMAQTYGLISPVPLQI--------GTY-GLPYAQNV---------------VPATPGWNSLASPQ----------PAAINGLAPAAATVIQQPTVIHHQHATPMSG--------VPSTPQS--PVAPLTTLNLLPPPSSATASTPEGVYPIQA--YPGTQGVAPRVPEHASTPMSYAQPQPYTVVYVPAQS--YGAPQYAPTVAPVAQSITANQLQTNALLASSTNAPQKEATGPDGCNLFIYHLPQEFSDADLANVFQPFGNVISAKVFIDRATNQSKCFGFVSFDNAISSQAAIQTMNGFQIGMKRLKVQLKR 465          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: UPI001E1DFD11 (CUGBP Elav-like family member 3-B isoform X1 n=6 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFD11)

HSP 1 Score: 165 bits (417), Expect = 1.050e-41
Identity = 139/430 (32.33%), Postives = 190/430 (44.19%), Query Frame = 0
Query:   55 VSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIIS-----NPAEEG--RRWAKQPV----------GPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            V PA     A  D  + + +K LFVGM  K   E D + +F PFG + ++ ++RD+NG SKGC+FVKY     A+ AI  LH    MPG   +LVV  AD   +R+   +    +  ++ +P+G       R IR S  G+  S   +       V    GH  +     P +  Q   A+ A +AP  I     S+ATM P    L +  S+                          AT  + G P        + L PT    +   +      +A+     A      T+   +   +Y A      G  + +     NP ++   +  A  P           GP G NLF+Y+LP    DA+LA  F PFG V+SAKVY DR T +SK FGFVS+ NPA A AAI  MNGF IG KRLKV  KR
Sbjct:  128 VKPADSESRAERDPAKHEDRK-LFVGMLNKQQTEDDIKHLFTPFGQVEELTILRDQNGNSKGCSFVKYSNHSEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRNATDGTISRAPEPLGSITDRGLRRIR-SHQGISKSTHDTIMQQQALVAAGQGHYLT-----PVTLAQIPQAVTALAAPNGI-----STATMTPTTASLANGEST--------------------------ATTPISGAP-------PSVLSPTPVAGFPIAQNGQQEIYANGIPAYAAQ----TITNGDPSQIYTAVTPYGIGEYLTAYPTAFNPIQQALLQNAALMPTAQKEAVLTSTGPDGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYVDRATNQSKCFGFVSFDNPACAQAAIQAMNGFQIGMKRLKVQLKR 508          
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Match: UPI001E1DD999 (CUGBP Elav-like family member 3-A isoform X7 n=3 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DD999)

HSP 1 Score: 162 bits (411), Expect = 1.050e-41
Identity = 137/433 (31.64%), Postives = 193/433 (44.57%), Query Frame = 0
Query:   52 VQTVSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGTIVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVVAIAD---DRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSCCSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSATMVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPHRNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRERKDLYCAFERSNRGMGIIS-----NPAEEG--RRWAKQPV----------GPSGANLFVYYLPGSLSDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNGFFIGNKRLKVVRKR 464
            + T++   +++ A  +    D  +KLFVGM  K   E D + +F PFG + ++ ++RD+NG SKGC+FVKY     A+ AI  LH    MPG   +LVV  AD   +R+   +    +  ++ +P+G       R IR S  G+  S   +       V    GH  +     P +  Q   A+ A +AP  I     S+ATM P    L +  S+                          AT  + G P        + L PT    +   +      +A+     A      T+   +   +Y A      G  + +     NP ++   +  A  P           GP G NLF+Y+LP    DA+LA  F PFG V+SAKVY DR T +SK FGFVS+ NPA A AAI  MNGF IG KRLKV  KR
Sbjct:   20 LSTMNRPIQVKPADSESRAED--RKLFVGMLNKQQTEDDIKHLFTPFGQVEELTILRDQNGNSKGCSFVKYSNHSEAQAAINNLHGSQTMPGASSSLVVKFADTEKERQLRRNATDGTISRAPEPLGSITDRGLRRIR-SHQGISKSTHDTIMQQQALVAAGQGHYLT-----PVTLAQIPQAVTALAAPNGI-----STATMTPTTASLANGEST--------------------------ATTPISGAP-------PSVLSPTPVAGFPIAQNGQQEIYANGIPAYAAQ----TITNGDPSQIYTAVTPYGIGEYLTAYPTAFNPIQQALLQNAALMPTAQKEAVLTSTGPDGCNLFIYHLPQEFGDAELAQMFMPFGNVISAKVYVDRATNQSKCFGFVSFDNPACAQAAIQAMNGFQIGMKRLKVQLKR 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5049.12312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Y1_9PHAE1.420e-11251.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV61_ECTSI3.190e-11251.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV60_ECTSI2.600e-6139.31Trinucleotide repeat containing 4, isoform CRA_d n... [more]
A0A7S0C1D5_9STRA1.830e-4235.22Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4QD22_9STRA2.520e-4234.22Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1BYN5_9STRA4.670e-4233.41Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A448YXA3_9STRA6.370e-4235.19Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
F6WTG3_CIOIN6.960e-4234.06Uncharacterized protein n=7 Tax=Ciona intestinalis... [more]
UPI001E1DFD111.050e-4132.33CUGBP Elav-like family member 3-B isoform X1 n=6 T... [more]
UPI001E1DD9991.050e-4131.64CUGBP Elav-like family member 3-A isoform X7 n=3 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 76..151
e-value: 1.3E-12
score: 57.9
coord: 388..461
e-value: 3.7E-24
score: 96.2
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 77..140
e-value: 6.7E-11
score: 41.9
coord: 389..459
e-value: 7.0E-19
score: 67.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 387..465
score: 17.131
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 75..155
score: 14.795
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 367..463
e-value: 1.9E-24
score: 87.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 63..160
e-value: 1.4E-20
score: 75.3
NoneNo IPR availablePANTHERPTHR24012:SF686CUGBP ELAV-LIKE FAMILY MEMBER 1coord: 73..466
NoneNo IPR availablePANTHERPTHR24012RNA BINDING PROTEINcoord: 73..466
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 74..463

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5049contigH-paniculata_contig5049:6345..9427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5049.12312.1mRNA_H-paniculata_contig5049.12312.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5049 6343..9427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5049.12312.1 ID=prot_H-paniculata_contig5049.12312.1|Name=mRNA_H-paniculata_contig5049.12312.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=468bp
RTHLLTLSPENILVSMDNTSVTRADFALEQQEVAAPPWGGRWLTSSAVLT
DVQTVSPASELRHATGDDGQSDQKKKLFVGMAPKAAYEADYRPVFAPFGT
IVDIYVIRDRNGFSKGCAFVKYDLVQSARCAIEALHDKYIMPGGFRTLVV
AIADDRRGPHSTATSSTWQSIDPVGLPCLDSCRTIRGSFSGVEYSPSVSC
CSSSGGVEFWPGHVSSVPGQKPASSPQAAYAIPAPSAPAAIPPSIPSSAT
MVPGVQYLFSDGSSPPHGTYVYYPCGLPASSSSCHQTAPMATNRVVGKPH
RNLSVASTALDPTAAVWYDGGRESSHRTFASPTMGLAQNVQHDTVRGRER
KDLYCAFERSNRGMGIISNPAEEGRRWAKQPVGPSGANLFVYYLPGSLSD
ADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPAHADAAIARMNG
FFIGNKRLKVVRKRGQVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf