mRNA_H-paniculata_contig5034.12287.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A6H5L040_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L040_9PHAE) HSP 1 Score: 156 bits (394), Expect = 1.660e-38 Identity = 101/251 (40.24%), Postives = 122/251 (48.61%), Query Frame = 3
Query: 711 RQTPCETSDDPDYPCLVSRPPGAFDNEIRIYLSSSRSEQEEDE-------DNAQQLLNVKVVVPKIAGLAEIRGLGRSGVWVSLGFSPNGKMAGPSEAVVGVVEEKKSDQGPH---------VLRYRMRGYSPSSVTPLPDCDQILTNGAVESSTNGSLVFSFSRPFSLPQPRGQGCHSLAQEEEGEENV-----------------------LAWLDPREEGVVVLWAFGSRSPWPSYHDATGAFVLPTL 1346
R+ PC SDDP Y CLV RPPG+F +EI +YLS S S + G W SLGFSP+GKMAGPSEAVVG V ++ VLRYRM GY +SVTPL D Q+LT +VE++ GSL+ F RP G+ + GEE + WLDPRE GVV+LWA+G+ + WPSYHDATGAFVLP L
Sbjct: 125 RRPPCAESDDPAYACLVPRPPGSFADEIMLYLSLSWSSSSVGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGARWASLGFSPDGKMAGPSEAVVGFVGATEAASXXXXXXXXXAAGVLRYRMDGYRIASVTPLSDRHQVLTEQSVETTEEGSLIVRFKRPLVETFSAGRDACAATAAAVGEEGTGGLEAAVAGAVAEVCSGEAGGSSMEWLDPRERGVVLLWAYGTGA-WPSYHDATGAFVLPRL 374
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A6H5L0H6_9PHAE (CoA_binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0H6_9PHAE) HSP 1 Score: 105 bits (261), Expect = 1.110e-22 Identity = 49/62 (79.03%), Postives = 57/62 (91.94%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVELGYYAPGGLGNTA 191
+TLGV++EA LGV RLWLQPGSEN EVLS+A +LGLQIIHGEPCVLVELGYYAPGGLG+++
Sbjct: 79 VTLGVVEEAGRLGVKRLWLQPGSENDEVLSKAEELGLQIIHGEPCVLVELGYYAPGGLGSSS 140
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A835YIV2_9STRA (CoA-binding domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIV2_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 2.070e-11 Identity = 31/52 (59.62%), Postives = 44/52 (84.62%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVELGY 161
+TLGV+Q+A LG+ +LWLQPG+E+ EV++ A LG+++I+G PCVLVELGY
Sbjct: 81 VTLGVVQQAHELGLRKLWLQPGAESEEVVALAAALGMELIYGGPCVLVELGY 132
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A7S3PI12_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PI12_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 3.710e-11 Identity = 30/51 (58.82%), Postives = 43/51 (84.31%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVELG 158
+T+ V++EAK+LG T LWLQPG+E+ EV+ +A DLGL++I+G PC+LV LG
Sbjct: 77 VTVKVIEEAKSLGFTHLWLQPGAESTEVVQKANDLGLELIYGGPCILVTLG 127
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A7S3XTW8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTW8_HETAK) HSP 1 Score: 67.4 bits (163), Expect = 3.350e-9 Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVELGY---YAPGGLGNTAG 194
IT VL++A LGV RLWLQPG+E++ VL++A LGL+++ G PC+LVELGY Y G + AG
Sbjct: 127 ITEEVLEQAAALGVRRLWLQPGAESSAVLAKAQALGLELLCGGPCLLVELGYDDSYTHDGSAHQAG 192
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A7S3PE52_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PE52_9STRA) HSP 1 Score: 65.5 bits (158), Expect = 4.420e-9 Identity = 27/50 (54.00%), Postives = 40/50 (80.00%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVEL 155
+T+ V++EAK+LG T LWLQPG+E+ EV+ +A DLG ++I G PC++V L
Sbjct: 77 VTVKVIEEAKSLGFTHLWLQPGAESTEVVQKANDLGSKLIFGGPCIIVSL 126
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A7S2V3A1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3A1_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 4.720e-9 Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVELGY 161
IT +++EA LG++R+WLQPG+E+ VL + T+ + +IHG PCVLVELG+
Sbjct: 95 ITESLIEEAANLGISRIWLQPGAESESVLQKITEKNIGVIHGGPCVLVELGF 146
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A1X2GX56_9FUNG (NAD(P)-binding protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GX56_9FUNG) HSP 1 Score: 62.8 bits (151), Expect = 4.230e-8 Identity = 26/49 (53.06%), Postives = 39/49 (79.59%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVE 152
+TLGVL+ K LGV+++WLQPG+E+++VL A + GL +I G PC+LV+
Sbjct: 81 VTLGVLEACKKLGVSKIWLQPGAEDSDVLKYAKEAGLDVIAGGPCILVQ 129
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A165SAF2_9APHY (NAD(P)-binding protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165SAF2_9APHY) HSP 1 Score: 62.0 bits (149), Expect = 8.040e-8 Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQ--IIHGEPCVLVE 152
ITLG+L++AK LG+ +WLQPG+EN EV+S D GL+ I+G PCVLVE
Sbjct: 82 ITLGILEQAKDLGIPAVWLQPGAENEEVISYIKDNGLEGKAIYGGPCVLVE 132
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Match: A0A168QZU5_ABSGL (CoA_binding domain-containing protein n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A168QZU5_ABSGL) HSP 1 Score: 61.2 bits (147), Expect = 9.040e-8 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 3
Query: 6 ITLGVLQEAKTLGVTRLWLQPGSENAEVLSRATDLGLQIIHGEPCVLVE 152
ITLGVL++ K LG+ +WLQPG+E+ VL A +LGL +I G PC+LV+
Sbjct: 61 ITLGVLKDCKRLGIDNVWLQPGAEDNSVLECAQELGLNVIAGGPCILVQ 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5034.12287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5034.12287.1 >prot_H-paniculata_contig5034.12287.1 ID=prot_H-paniculata_contig5034.12287.1|Name=mRNA_H-paniculata_contig5034.12287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp MRWFTKTPTRNRIGTTAAKMPKNTATAAAVIVAIITAIIAIASTLASLAAback to top mRNA from alignment at H-paniculata_contig5034:376..3856+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig5034.12287.1 ID=mRNA_H-paniculata_contig5034.12287.1|Name=mRNA_H-paniculata_contig5034.12287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3481bp|location=Sequence derived from alignment at H-paniculata_contig5034:376..3856+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig5034:376..3856+ >mRNA_H-paniculata_contig5034.12287.1 ID=mRNA_H-paniculata_contig5034.12287.1|Name=mRNA_H-paniculata_contig5034.12287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig5034:376..3856+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |