prot_H-paniculata_contig5021.12271.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5021.12271.1
Unique Nameprot_H-paniculata_contig5021.12271.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length345
Homology
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S4D4V0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V0_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 5.760e-11
Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 0
Query:  166 DTGLALDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVS 272
            D   A+D + KDAP P+ L GGL+KG+A +      ++ +DVE V+    RAL+ D     +LGEG A+C   + +SY+ S ING  S  + LQ+ V G+   G+ S
Sbjct:  102 DVNSAIDTLLKDAPLPVKLAGGLIKGIAGMAGSMMAETRNDVEEVLDEMNRALRFDPNVQALLGEG-AQCGLVLSQSYSSSNINGRVSKQLFLQVQVAGARGAGTAS 207          
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: L1K179_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1K179_GUITC)

HSP 1 Score: 70.1 bits (170), Expect = 3.100e-10
Identity = 38/107 (35.51%), Postives = 68/107 (63.55%), Query Frame = 0
Query:  171 LDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASV 277
            +D+  +DAP PI + GG++KG A +  +  Q   DDV+ V++  ER ++ +  A+ +LG       +PV +S++ S+ING+S+  + L++PVRG+ S G++ V  S+
Sbjct:   96 IDKAMQDAPLPIKMFGGIMKGFAGMAGDMMQAVADDVDRVVEVAERRVRMNAGATRILGS-EISVGAPVSQSFSSSSINGVSTKQIALRLPVRGTSSSGTLIVDGSI 201          
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S0KA06_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA06_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 4.740e-8
Identity = 53/200 (26.50%), Postives = 96/200 (48.00%), Query Frame = 0
Query:  145 SSTSSSKRAKRDRGSLNRGGTDTGLALDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTER 344
            SS S S+  +  R S + GG      ++E+ KDAPFP+ ++G +V  + S M E+  +    V+ +I+     +  D +   +LGE       P  +S +   ING +  +V     V+GS + G   + AS GE            K +++ + +   GR+I V  +++G    ++PR    +N D   +++D E+ E+
Sbjct:   99 SSKSDSQLVESSRDSQSAGGL-----INEMLKDAPFPVRMMGKMVAPIVSSMAESLGEQARQVQDLIEDARIMIVRDSRVVELLGEPVEVSTMPFQQSSSSVNINGQAKTTVQASFQVQGSRAGGVAIMSASGGE------------KASIEKLTVQAMGRSIDVDVSSSGSTWSSSPRSGLKSNDD--MDIIDAEFVEK 279          
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S2WVA2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVA2_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.050e-6
Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 0
Query:  184 LVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGK--GMENAPRRAPGA---------NTDGGKNVVDVE 340
            L GGL+K V + + E+  + + DV+ V  AT+R L+ D QA  MLG     C  P  +  + ++ING ++ +V LQMPV G+  QG V+V+AS G   G            +  V+L  NG+ + +     G   G  + P R  G          N   G  VVDV+
Sbjct:  142 LAGGLLKVVGNGVWESLAEMKSDVDEVQDATQRLLRLDSQAVTMLG-ADITCGPPFSQMSSTTSINGRTTKTVALQMPVTGTLGQGVVAVEASPGAPNGL-----------ISQVSLQANGQVVQIPLDGGGNAVGGRSGPERGAGGGPSISAGTTNNSKGPKVVDVD 297          
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: R1DMQ4_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMQ4_EMIHU)

HSP 1 Score: 58.9 bits (141), Expect = 1.550e-6
Identity = 48/173 (27.75%), Postives = 88/173 (50.87%), Query Frame = 0
Query:  171 LDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTE 343
            +DE+ KDAP P+ ++GGLVK + + +    Q+S+   E ++Q  + AL+ D + +++LG         VG ++++S+ N   +VS+ LQ  + G + +G VS++   G           N  V + ++ +  NG+   V     G G + +     GA   GG  V+D+E  +
Sbjct:   66 IDELLKDAPLPVKVLGGLVKPLIAGLGAALQESQAQGESLLQEAQGALRADSRVALLLGGDVV-----VGATFSQSSSNVNGAVSLALQCQLSGKKGEGVVSIRGQGG-----------NGDVYVTSLVVQANGQQFEVPTLRGGGGGDVSG----GA---GGSGVIDIEVVQ 215          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S4D4V0_HETAK5.760e-1139.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
L1K179_GUITC3.100e-1035.51Uncharacterized protein n=3 Tax=Guillardia theta T... [more]
A0A7S0KA06_9STRA4.740e-826.50Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S2WVA2_9STRA1.050e-632.74Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
R1DMQ4_EMIHU1.550e-627.75Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..344
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..31
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5021contigH-paniculata_contig5021:6006..13659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5021.12271.1mRNA_H-paniculata_contig5021.12271.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5021 5310..13958 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5021.12271.1 ID=prot_H-paniculata_contig5021.12271.1|Name=mRNA_H-paniculata_contig5021.12271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MNMKRFSCSIPSTTLFFLVIWFISVITTANAFLASPFQSLPPISTGRSGD
IFGANAHVSAQGWKKVAVRMTASGDEELEGLRRENESLKEELKALSKRSK
LPADKISFNPLKALGKLFLPELKSAADYGDGHDSDVRQGETEIVSSTSSS
KRAKRDRGSLNRGGTDTGLALDEIFKDAPFPINLVGGLVKGVASVMEETF
QDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTING
LSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNL
TVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTER*
back to top