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Homology
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S4D4V0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4V0_HETAK) HSP 1 Score: 72.4 bits (176), Expect = 1.970e-10 Identity = 42/107 (39.25%), Postives = 62/107 (57.94%), Query Frame = 3
Query: 795 DTGLALDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVS 1115
D A+D + KDAP P+ L GGL+KG+A + ++ +DVE V+ RAL+ D +LGEG A+C + +SY+ S ING S + LQ+ V G+ G+ S
Sbjct: 102 DVNSAIDTLLKDAPLPVKLAGGLIKGIAGMAGSMMAETRNDVEEVLDEMNRALRFDPNVQALLGEG-AQCGLVLSQSYSSSNINGRVSKQLFLQVQVAGARGAGTAS 207
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: L1K179_GUITC (Uncharacterized protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1K179_GUITC) HSP 1 Score: 70.1 bits (170), Expect = 9.870e-10 Identity = 38/107 (35.51%), Postives = 68/107 (63.55%), Query Frame = 3
Query: 810 LDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASV 1130
+D+ +DAP PI + GG++KG A + + Q DDV+ V++ ER ++ + A+ +LG +PV +S++ S+ING+S+ + L++PVRG+ S G++ V S+
Sbjct: 96 IDKAMQDAPLPIKMFGGIMKGFAGMAGDMMQAVADDVDRVVEVAERRVRMNAGATRILGS-EISVGAPVSQSFSSSSINGVSTKQIALRLPVRGTSSSGTLIVDGSI 201
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S0KA06_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA06_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.490e-7 Identity = 53/200 (26.50%), Postives = 96/200 (48.00%), Query Frame = 3
Query: 732 SSTSSSKRAKRDRGSLNRGGTDTGLALDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTER 1331
SS S S+ + R S + GG ++E+ KDAPFP+ ++G +V + S M E+ + V+ +I+ + D + +LGE P +S + ING + +V V+GS + G + AS GE K +++ + + GR+I V +++G ++PR +N D +++D E+ E+
Sbjct: 99 SSKSDSQLVESSRDSQSAGGL-----INEMLKDAPFPVRMMGKMVAPIVSSMAESLGEQARQVQDLIEDARIMIVRDSRVVELLGEPVEVSTMPFQQSSSSVNINGQAKTTVQASFQVQGSRAGGVAIMSASGGE------------KASIEKLTVQAMGRSIDVDVSSSGSTWSSSPRSGLKSNDD--MDIIDAEFVEK 279
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: A0A7S2WVA2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVA2_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 3.240e-6 Identity = 55/168 (32.74%), Postives = 81/168 (48.21%), Query Frame = 3
Query: 849 LVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGK--GMENAPRRAPGA---------NTDGGKNVVDVE 1319
L GGL+K V + + E+ + + DV+ V AT+R L+ D QA MLG C P + + ++ING ++ +V LQMPV G+ QG V+V+AS G G + V+L NG+ + + G G + P R G N G VVDV+
Sbjct: 142 LAGGLLKVVGNGVWESLAEMKSDVDEVQDATQRLLRLDSQAVTMLG-ADITCGPPFSQMSSTTSINGRTTKTVALQMPVTGTLGQGVVAVEASPGAPNGL-----------ISQVSLQANGQVVQIPLDGGGNAVGGRSGPERGAGGGPSISAGTTNNSKGPKVVDVD 297
BLAST of mRNA_H-paniculata_contig5021.12271.1 vs. uniprot
Match: R1DMQ4_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DMQ4_EMIHU) HSP 1 Score: 58.9 bits (141), Expect = 4.090e-6 Identity = 48/173 (27.75%), Postives = 88/173 (50.87%), Query Frame = 3
Query: 810 LDEIFKDAPFPINLVGGLVKGVASVMEETFQDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTINGLSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNLTVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTE 1328
+DE+ KDAP P+ ++GGLVK + + + Q+S+ E ++Q + AL+ D + +++LG VG ++++S+ N +VS+ LQ + G + +G VS++ G N V + ++ + NG+ V G G + + GA GG V+D+E +
Sbjct: 66 IDELLKDAPLPVKVLGGLVKPLIAGLGAALQESQAQGESLLQEAQGALRADSRVALLLGGDVV-----VGATFSQSSSNVNGAVSLALQCQLSGKKGEGVVSIRGQGG-----------NGDVYVTSLVVQANGQQFEVPTLRGGGGGDVSG----GA---GGSGVIDIEVVQ 215
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | chloroplast |
| Exons | 6 |
| Model size | 2030 |
| Cds size | 1035 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig5021.12271.1 >prot_H-paniculata_contig5021.12271.1 ID=prot_H-paniculata_contig5021.12271.1|Name=mRNA_H-paniculata_contig5021.12271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=345bp
MNMKRFSCSIPSTTLFFLVIWFISVITTANAFLASPFQSLPPISTGRSGD
IFGANAHVSAQGWKKVAVRMTASGDEELEGLRRENESLKEELKALSKRSK
LPADKISFNPLKALGKLFLPELKSAADYGDGHDSDVRQGETEIVSSTSSS
KRAKRDRGSLNRGGTDTGLALDEIFKDAPFPINLVGGLVKGVASVMEETF
QDSEDDVELVIQATERALQHDQQASMMLGEGSAKCLSPVGKSYAKSTING
LSSVSVGLQMPVRGSESQGSVSVKASVGENTGTGRSNKSNSKVTLKAVNL
TVNGRTISVKPAAAGKGMENAPRRAPGANTDGGKNVVDVEYTER* back to topmRNA from alignment at H-paniculata_contig5021:5310..13958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig5021.12271.1 ID=mRNA_H-paniculata_contig5021.12271.1|Name=mRNA_H-paniculata_contig5021.12271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8649bp|location=Sequence derived from alignment at H-paniculata_contig5021:5310..13958- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCTGCTCACTTGCTTCCTCTCTCCCAAGATAGTGAAGACGTGTTCTACCA
CTACCACAGCCTACTGACCATAGATATCAAACATACATAACAACAGGGAA
TGTAGATGGAGCACTGCTGCAGCGGTCTGCAGGGGATGTCACTGTGTAAC
AGTCGATACTCGGCATTGGGACCTACATTTATATTTTCTACAGGAACTGA
GACCCTACCTTCGAGCGAATGTGGACAAGAAAAAATACAACACTGCTAGC
CTAAATACTTTTGGTCTTGAAAGGGGTGCTGTGATATGCTGTGCTGCGGA
TGAATATGAAGCGGTAGTCACTAATGGCTTGCTTTTCGTGCTCTATTCCA
TCTACGACTTTGTTCTTCCTCGTAATATGGTTCATCTCGGTAATTACAAC
GGCTAACGCTTTCCTGGCGTCGCCATTCCAGTCGCTTCCACCTATTTCGA
CAGGAAGGAGCGGCGACATTTTTGGTGCAAATGCTCATGTTTCGGCGCAG
GGATGGAAAAAGGTGGCTGTGAGGATGACAGCCAGTGGTGACGAAGAACT
AGAGGGCTTGCGGCGAGAGAACGAAAGCCTTAAGGAGGAACTAAAGGCGC
TGTCCAAGCGGAGTAAGCTGCCGGCGGACAAGATAAGCTTCAATCCGTTG
AAGGCGTTAGGTATTTTTTTAAGCTGTCGCAACTTCAACGTTCCATGTAT
GGGCGGTCTGTTGAATCCGAGCTGTCTGTGTCCAGGCTGCGGTCCCTACC
GGCGTATCTGTTTGTAGCCCGTGCCCAAGCAATATGTTGGTACTCTGTTG
GATGATTAAGTCTTTGTGGCTGTCATTTGAGAATATAACTCCCCGTTTTT
CCAGAAAGCCGGATGACACGTAACAGACTACCCTACTCTACTTGACTCCG
TTCTCTGCGGACGATCTCTGCACAGTCCCGTGTACTGTGATACTGTTTCG
AGAGCAGTACCTTTGTACTCCGTATATGTTTGCCATAGAACAGTACCGAG
TAGCAAATAGGCTGCTGTACGCGAAAACGACTGTTTTGACAAGCCTGCCG
TATCGCTGTCCTCGTCACAGAAGGGTCAAATATGGGAAATGCGAGTATAC
AACAAACGGGTCGCCCGACGAGCAAGTTTGTCAGGATCTTTGGTGAAACA
AGCTATGCACTCCCTCCGTCCCACAAGTCTGCGACGTTAAGGGTGTAACT
TATTGCAATGACCTCCGAATCAAAAACGTTTTTTTGTGTCGGGTGCCTTG
GTGTTAATCACGGTAATTTTATTCTTCGCAGATTTCCTCGTTCCCATCAA
TCCACCATTCTACCACCGCATCGAAAGCCTCTCAGTCGATTTTGACCGAT
TATGGCTGACTTCCCGCACGCTGCCCTTTCTTGATTTCGGTGTGCTGTAC
CTCGAAATCGTTACCTCTTAGCGCTTTCAACACCTCATTGTACCGCTTAA
AGACGCTCTGCCACACCCTCTCTAAGGCTGCCACGTCGTACACATCGTAC
ATGCTCTTTACCCCCCTCCAAAAGGCCGTTAATCGTACCGTAATTCTCCC
TCCAAACCCTACTTTTCAGAGATGCAAAGAATCCCAAGTCGTTCATGTTG
AGATCTGGTGATTGCCCAGGCTGAGTTACGAGATTGACGTTCCACCCCCC
GTCCCTCCCGAGTTCGTTGAGCTTCCACGTCATGTCTTTTCCCGTGTGGG
AGGGTCGCTCCGTCCTGCTGCGCGACCACTTCCTCACCCTCCAATCACGG
CATATTTTCCTTCAATGCTGGGAGGGAAAAGTCCTTATACCACTCCTGGT
ACCACGCGATGTCATGGTCACGTCGAACTCGTATTGCTGCCCCCGTTCAC
GCCTGACCGAAATCCTCTGCGCCTGCTTGATGGCGCAAACACGCCAGATT
CTGATCTTGCCGTCGAAATCGCGGGAAGGATCCGGACGCGAAACGGCGCA
GATGAACACCACCTTAGGAATGTGACTCTTATGCTGTACTTCGGTGGACC
CAACCCTTTCCTCCCCGGGGAGCATGCGGACGCGAATTAGGTAAATCATG
CTTCCTCGGTGTGCTTGTTTCGAAGCCGCTCCTGAAAGTGAACCTTGCTG
CTTGGTCCAGGACGAAGTCTACCCGGTTCTTTCGGTTCGTCAGCGACAGA
GATGGCGTAATGCGCGGTATCGCCCTCGTGGCGCCTATCTCTTGAAGCCA
TCGCTGAAGTTTTGACCTGCCGGCTACGAGATCAACTTCGACTAGCTTGC
CAGGCGGTTGATCGAGGGTCAGGGTTCGATTCGCGGCGTTGACTCTTCGA
CTCGTGGCGTGATTCATCGATGTGAGGTCCGACGGCCGCCCGCTTCGTGA
CGCTGACCTCAGCGGAAGGGCGTTGCCATGGTCCAGTCGTTCTCGTACAC
GCCCCCAAAGTTGTCTGGGATATTGGTCACCAACTCCAAACTGCTCCGCC
AACTCTGGCCCAACGCCTTTCGCAAGCCGTTTCTTACCTAAAGGTAGCGC
TAAACCGTACCATACGGCCAACGCATTCGACCTTCCTCGCTCAGCTCGCA
ATTTCACCCCGGGCTGATGGGCTCTCGGCAAAAGATGCCGGACTCGCCGA
AGTGGTAATGTTAGTTGCGAAACTCGCGCCGCAGACGGTCTGGAGGCTGC
ACGAGAGTCGTACCGTTCTTGGCGATGTGGTGAGATATTGTGTGATGATA
GGGGGGGTGCTTTGTCCCCCTTCGGGCCCAGCGTAGCCACTCAAAATGGA
GCCGAAAAGGGCCGTTTTTTAGTTCCCCTTCTCGCGAAATTCTCGGAACT
ATTTCGGAACTATTTCGGAACTATATACGAAAACGAAATAATTGTTCTTA
ACTTTCATGTTCGTAGAGAAACCGCCTACACAAGAAATGAGAAATCATAA
CGCCGCAGACTTAAGGGACGGGTGAAGGACCAGCTCTGCCTTCATCCCTA
CATCAAACTTCACAATTAACTGTTAACAGTCTTCATCACCTTCATCGATT
TTTTACTTTTGCAATTAGCTTCCCTAATCCTCTTAGCTGCAGTGCGGATG
AAGGTCAATGAAGGCAGCGCCTCCATCGGACCTCTCGTTTATCCAAGGTG
TGAAAGGTTAACACATGGCCTCACCGTTCCACATGTTGGGAAAATTAGGT
ACTGTCTGTTTGTACTCTTTTGCTTGAACATATATTATATGTAAATATGC
AATTATATTCAGATCTCGGTTCGTTTCGTGATCAACACCTGAGATATGAA
GGAGCGGTCCGATGAAGGTGCTAACCTTGCCTTGATGGCCTTCATCGATT
TTTTAGATGTCATAATTGGGGGCCTTCATCACGGTCACCGACTTTTTGGA
ATCGAAAATGTCTGATCTTTGAATCTTCGATTTTTCAATCCTCCTCTCCA
TCACCTTTATCGGATTTCGACTTTCGCAAATAGTTCACCTTCAAACCTTC
ATGCTTGAATCACGTCCTGTATTTAGCTCACCTTCAGTCAAAGGAAGCGG
GACATCCTCATGGAACCGCTCCTTCATCTGAGGTGTGAAAAAAATTACGA
AGCCGATTCGTAAACCGATGTATGTGCACACAAGCTACTCGGCATACACA
AAACACAGGAGGCATACAACGAAGTGGACAGATCGCAACGACGGCCTTCC
GTGAAGTGAGATAGGTAGGCGCCACCTTCGAGTGGGAGTTACGGTAACCC
GAACGGTGCGAATGTGAACAAGCCTGAAGCACCAGCGGCAACATCATATA
ACGGCATACAATGTTTCTGCAACTTGAAAATCCGTTGGACAACATAACAC
GTTTTGATTGGCTTATTTGCTTCATTGGCAGGGTTACTGTACTGTACGTT
TGGTGGCTTTCCTCCAGCCTACAATTAGAGTATGAGGTCTACTGAGTCGG
ATTTGGTGTGTGCCCACGAATTTTCCATGCAGATATTTTTTTGTCAACCG
ATACAAAAAATCCTCCATGCGAATTTTTGCAAGATGTGGCCATTTTCTAT
TTTTGAATAGGTCAAAATTAGGATCACGATATTTTGCCGAAATTTACCAC
CATTCGACTTCTTTTCTGCACAATCTAAGTCCGTGAACGCGCCCGCCCTC
AAAGAAAAGCGGGAAAAAAAAAAGAAAAAAAAAAAGACGAGAACGGTTAC
TACAACCTTAACCACAACCCGTTTTTAATTTTCCTCTCTTCCCAAGCGAG
TCTGAAGATACAGGGTCTATATTTTCATCATCCTTTGTTTTAATGTATTG
TCGACAAATTCTCAATGCTATACGCTGCTTTGCTACCCCCAGTCGTCGTT
GTCTCTCGTGCTAAAGGCCTACGAAGAACACGGTGGTCCAAAATTGGAAC
GTTTGCCGTCACGCTCGATTTTTTCAAAAAAATAGCTTTCAGAGTTGGAA
CCTACTGTATTTTCTTGCCTACGTCGAATTTGCACTCACTACGGCACTGG
AAATGATAGAAAAATATTTTTCTGTGTTTTTCCAAGTCAAGTTCAAAGAG
GATAAGGGAAAGATAACGCCCTTACACGTTTTCCACCCCGGATGTGTACT
TCAGCTGACGTCGGCGGTTTGCCTCGTCGCTGTAGCTGTCGCTGTCGCTG
TCGCTCAAGTAACGCCTATACCGCTTTCTCCTATATAGAAAGCATTATGA
CACGAAACATGCACGGACAGTCAGAGTTTGCACTGCATGTGGATGATTCT
AGAGGGATTAGCATAATCGACACCGATACTACCGTAGTGGCGCGCCCTGG
CCTAGCCTAACCCACCCCCGCGTGACTGTTAACAAGCCTCTGTCGTGCGC
GCGAAAACCAACCAACCTTAGGCAAACTGTTCCTTCCCGAGCTGAAATCT
GCAGCTGACTATGGCGATGGCCATGACAGTGACGTCAGACAAGGAGAAAC
GGAGATTGTATCGTCCACGTCATCATCCAAGAGAGCGAAACGGGACCGTG
GTAGCTTGAATCGCGGAGGAACTGATACCGGTTTGGCCCTTGATGAAATT
TTCAAGGACGCTCCGTTTCCTATTAACCTGGTCGGCGGGTTGGTAAAGGC
AAGGGCGATAAACGTTCAAGGCGATAGTTTATCCGAGTTAGCTCGAGTAA
TTTCGACTAGATCTTAGGAGCGTGAACGAGTTTTTGGGAAGCATTTAGTT
CACTAATGGACAAATATACCTAGCAGAATATCAAGTTAGCGACAAGCACG
GCCTTCTACTTTGCTACAGCTCTCGATCAAATCCAGAATCTGAGATATTT
GCTCTGCGCAGGATTCTTGAAGAACATGGAGAAAAGTTTTGCGGGGGGGA
ATTGTGTTCCGAAACGACCTCGACCGCCGCACCATACTATTTTGTATTTA
TTATGTTTGTATCACTATTTTTCTGGTTTTATTTACTTGTTTTGTTCATG
TTTTTTGGTTTTTTTAGATATTTTATTCACTTTTAAAAATTCTAATCTAA
TCATTACTTTTGTGAAAGTGAGGGTAAGTATCCTCGACAGACCTTGGGTA
ATTATTATCCCTTGTGAGGTAGGTAGCCAACACACTTTTGGTTATTCGTT
CATTTATTCATTTAGTTTACTTCGTTATATATTCCATGTACGCGAAAACA
GGGAGTGGCCAGTGTAATGGAGGAGACCTTCCAAGATTCGGAGGATGACG
TAGAACTGGTGAGCGAGAGGCATCTTAACATAGGGCGTCGCTTTTTCTGG
CTGTTTTTCTCTCCTCCGTCGTAGTATCTTGCGTATCCACGTGCCCCGGT
AACAGCCGATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTTTCTTC
CTCCTCTTCTGTTCTGGCAAAAATCTAGCAATATTTGCAAAGCGAGCGCC
ATATTTGTTTGTTGGAGCATTGCCTGGGCAATGTCAAAATGGATCACCTA
TATATATATATGTCTCGGCGTGTTCTGAACAGTATGTATGATCTTGTGGT
GTGGTGCGCTCTTGTGGTTGGCTAGAGTTGGGCTAACGAGGCGGTTGCTT
TGTCGTTGTTCTTCCGCTTACTTAGTGAAGAGGCTTTTAGAGAGCTTGGT
TAGATTGCCTTCCGTGACGTTTACATAGCTTGGCCTAATGATTTTCGTAT
CTATGCTGGTTCTGGCGACACTTTGGTGTGTTAGGCATTCTGTCAAGAAA
TACGCTTGATTTTACCCTTCCAACTTTTTTTTTTTTTAACCCCCGGAAGG
CTGAGGCAAAAGCCTTTACTGATGCTTCCACACTTAAGTATTCTACCAAA
GTATGTCTACATTTTATCGTTCCTTTTGCTTTGAAATGTCGTATTTTAAA
ATTGTTATCTCTGTCGCACCATGCGCATAGCCACGGAGATAAATCTATCC
CAGAGCCACCATAATCTCGACAAGCAATATCTTGCTCCCGTCTCGTAGAA
GGATTGTGGTGTTTCGGTTTCTCAATATTTTTTTTGCTTGCGTTTTACAA
TTTTAGGAAAATAAGGATCTTTTTCTGGAGAACGTTTCGAGAAGTTTCCT
CAATAATCATCACCATCTCATGCACCGCGTACTCCTCCTCCGAACGGGAC
CAAGAGCACGTTCACCTAATTAATCTCGACGTCGTCATTTAAAATATTTC
TTCTCAACCTCCAGTCGTGTACCACCACCACGGTAGCGAATCTGATAACG
AAAAAACACAAGCCCCTGACAGGACCCTATTGCCGATTTTGTGGTACATC
TGAACTCCACTGGATAGGCGTCGACATAAAATCGTAGCTGAGCTGTTCTT
GGTATACAGCATATTTCACTCTGCTTTTGGGCGATGCAAGACTTGACGAT
GACGATGACGAGAGAGATGGGATGTGGGAAGCAAGACTATCACCCGACAA
GCCGTAAAGACCTTTTCTCATATAATAGGTCTCCTTGACTATTGTAATAG
GGAGGATGCTACAGCTCCCAGGGAATGCTCCTGATACAAGACATGTGCCG
GCTTGTCTGCTTAACTGTCACCCGTTGACAGGTGATACAAGCAACTGAGA
GAGCGCTGCAGCATGACCAGCAGGCCTCCATGATGCTGGGGGAGGGGAGT
GCGAAGTGTCTGTCACCGGTGGGGAAATCGTACGCGAAGAGTACCATCAA
TGGGTTATCATCGGTGTCCGTGGGGTTGCAGATGCCTGTGCGTGGGAGCG
AGAGCCAGGTGGGTTGGACAATGACCATAGCGTAAAATTGGGCTCGTTTT
GCCGGAAGGGAACAGTCCTGAGAAAGTTTCCAAGACTACAGGCAGGATGA
CGGTGTTCTCATGGTTGGGACACACATGTGAGTATGTCATCGGATGTTCA
TTGTTGCCGTCAGTCTCTTGGCATTGAACCACTCAAAGGTAACGGGGACA
TAGTGCAAGACGGCGTAACTGTTGGAGTTACGTGATTTTTGGAAAGTTCG
CAAGGTGATTTGTGTAACTGAAGATGGCCAATAACGTCCATGTTTATATC
TATTCTAGTCAACGCAGGTAGAAGAATCAATTGACAATCGAGGGGGGGCT
TATTGTGCTAGTTTATGTGATAGGCGTACGCATCATCAAACATGGGGGCA
TGTTTTGTTATTTTTATTTAAATAGTCGATTTGCCTCACCCTAAAGGTCA
GATTGTCGCCACCATTTTTGTTTTGCAAGCATCACATCTTGTGAATCCGC
ATATCTGCACCAATCTTTCACCGTCTTGTGGCACCCTGCACGTTATGCTC
GGGGTTCAAAACACGGCATCAGGGATCGGTTTCTGTAAAAGCCTCCGTCG
GAGAAAACACGGGGACCGGGAGAAGCAACAAAAGCAATAGCAAGGTCACA
CTCAAAGCCGTGAACCTCACCGTGAACGGAAGAACGATCTCCGTCAAGCC
CGCCGCCGCTGGGAAGGGGATGGAAAACGCACCGAGGCGTGCGCCAGGCG
CGAACACTGACGGGGGCAAAAACGTGGTCGATGTGGAGTATACGGAGAGA
TGACAGACAGGCCTCCAAGGGCGAGAGGGAGCGGAGCTAGGCATGGCTGG
GCGGGAAAGGGGGGTTATAGGGGTGGGATTTTGTATGTACTGCATGGCGC
TTGCTTCCTCTCCCATCTACACGTGTATGCTACTATTGTATGTAGTATGT
ATGCTCTTTGTAGTAGTCCTTCCGCATCTAGGCGGCCATGCGCTCATGTT
CATATAGTAGGTGTGCGTGTGTATCTTCGTCTAGTGACGGAGCTAACGGA
GTACCACATGATACGTATTTTGAAATTGTACTATTTGCTGTGGTTGGATT
ATGGGGAGGTGGACAACGAAATGCGTCTATTTTTCGTCATTATTTGGTCC
TATTTCTCCGAGATGGGCAATTCATTTTACAGCGCGTGTCATGCCTACGC
CGTGTAAACTGGATATGGTTCTGCGCCACAAGGATGAGCTCGCTGCCTCT
CGAGTCCCCTATAGTGCAATAATGGAAACTTGCCATGCTTCGGTTGTATT
GTACTCGCGCGACATGGTTTTTTTTCATGGTTTTGGTTATTTTATGTCAA
CTATCTGCTGTGTATTTCATGCTGGTTCTTTATTTTTGTATACATAAAAA
GAAAATCAGTATGTATGTTATCCTAACTTTTTTCGACGCCAAACAAACGG
ATCACAGCGATTCTTGCACCGATGGGTGTCTCATGGAAATCAACGGGGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig5021:5310..13958- >mRNA_H-paniculata_contig5021.12271.1 ID=mRNA_H-paniculata_contig5021.12271.1|Name=mRNA_H-paniculata_contig5021.12271.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2070bp|location=Sequence derived from alignment at H-paniculata_contig5021:5310..13958- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATATGAAGCGGTATGAATATGAAGCGGTTTTCGTGCTCTATTCCAT
CTACGACTTTGTTCTTCCTCGTAATATGGTTCATCTCGGTAATTACAACG
GCTAACGCTTTCCTGGCGTCGCCATTCCAGTCGCTTCCACCTATTTCGAC
AGGAAGGAGCGGCGACATTTTTGGTGCAAATGCTCATGTTTCGGCGCAGG
GATGGAAAAAGGTGGCTGTGAGGATGACAGCCAGTGGTGACGAAGAACTA
GAGGGCTTGCGGCGAGAGAACGAAAGCCTTAAGGAGGAACTAAAGGCGCT
GTCCAAGCGGAGTAAGCTGCCGGCGGACAAGATAAGCTTCAATCCGTTGA
AGGCGTTAGTTTCGTGCTCTATTCCATCTACGACTTTGTTCTTCCTCGTA
ATATGGTTCATCTCGGTAATTACAACGGCTAACGCTTTCCTGGCGTCGCC
ATTCCAGTCGCTTCCACCTATTTCGACAGGAAGGAGCGGCGACATTTTTG
GTGCAAATGCTCATGTTTCGGCGCAGGGATGGAAAAAGGTGGCTGTGAGG
ATGACAGCCAGTGGTGACGAAGAACTAGAGGGCTTGCGGCGAGAGAACGA
AAGCCTTAAGGAGGAACTAAAGGCGCTGTCCAAGCGGAGTAAGCTGCCGG
CGGACAAGATAAGCTTCAATCCGTTGAAGGCGTTAGGCAAACTGTTCCTT
CCCGAGCTGAAATCTGCAGCTGACTATGGCGATGGCCATGACAGTGACGT
CAGACAAGGAGAAACGGAGATTGTATCGTCCACGTCATCATCCAAGAGAG
CGAAACGGGACCGTGGTAGCTTGAATCGCGGAGGAACTGATACCGGTTTG
GCCCTTGATGAAATTTTCAAGGACGCTCCGTTTCCTATTAACCTGGTCGG
CGGGTTGGTAAAGGCAAACTGTTCCTTCCCGAGCTGAAATCTGCAGCTGA
CTATGGCGATGGCCATGACAGTGACGTCAGACAAGGAGAAACGGAGATTG
TATCGTCCACGTCATCATCCAAGAGAGCGAAACGGGACCGTGGTAGCTTG
AATCGCGGAGGAACTGATACCGGTTTGGCCCTTGATGAAATTTTCAAGGA
CGCTCCGTTTCCTATTAACCTGGTCGGCGGGTTGGTAAAGGGAGTGGCCA
GTGTAATGGAGGAGACCTTCCAAGATTCGGAGGATGACGTAGAACTGGGA
GTGGCCAGTGTAATGGAGGAGACCTTCCAAGATTCGGAGGATGACGTAGA
ACTGGTGATACAAGCAACTGAGAGAGCGCTGCAGCATGACCAGCAGGCCT
CCATGATGCTGGGGGAGGGGAGTGCGAAGTGTCTGTCACCGGTGGGGAAA
TCGTACGCGAAGAGTACCATCAATGGGTTATCATCGGTGTCCGTGGGGTT
GCAGATGCCTGTGCGTGGGAGCGAGAGCCAGGTGATACAAGCAACTGAGA
GAGCGCTGCAGCATGACCAGCAGGCCTCCATGATGCTGGGGGAGGGGAGT
GCGAAGTGTCTGTCACCGGTGGGGAAATCGTACGCGAAGAGTACCATCAA
TGGGTTATCATCGGTGTCCGTGGGGTTGCAGATGCCTGTGCGTGGGAGCG
AGAGCCAGGGATCGGTTTCTGTAAAAGCCTCCGTCGGAGAAAACACGGGG
ACCGGGAGAAGCAACAAAAGCAATAGCAAGGTCACACTCAAAGCCGTGAA
CCTCACCGTGAACGGAAGAACGATCTCCGTCAAGCCCGCCGCCGCTGGGA
AGGGGATGGAAAACGCACCGAGGCGTGCGCCAGGCGCGAACACTGACGGG
GGCAAAAACGTGGTCGATGTGGAGTATACGGAGAGATGAGGATCGGTTTC
TGTAAAAGCCTCCGTCGGAGAAAACACGGGGACCGGGAGAAGCAACAAAA
GCAATAGCAAGGTCACACTCAAAGCCGTGAACCTCACCGTGAACGGAAGA
ACGATCTCCGTCAAGCCCGCCGCCGCTGGGAAGGGGATGGAAAACGCACC
GAGGCGTGCGCCAGGCGCGAACACTGACGGGGGCAAAAACGTGGTCGATG
TGGAGTATACGGAGAGATGA back to top
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