mRNA_H-paniculata_contig11910.1226.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 168 bits (425), Expect = 4.970e-43 Identity = 95/199 (47.74%), Postives = 115/199 (57.79%), Query Frame = 2 Query: 116 RRVYARPLYSEWAWGTVL---QSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCP-RSHDEGVRYGGITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700 RRVY R Y++ W L + TD R+AR FR FR+PY F + L+++V++ WFP G V GR VPVELKVLA QIL RGN F I + IS S FH FCK FA +L+ E + L G R E G GAVGSTDVTHI WG P R+Y GKEG PT+A++ TVDHSGRV +T Sbjct: 96 RRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPT--GESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVT 292
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 162 bits (410), Expect = 1.190e-41 Identity = 106/275 (38.55%), Postives = 145/275 (52.73%), Query Frame = 3 Query: 501 TADALAATMKAYDTVGSPGQ*ARLMSPTSH---GVAPRHYIPVSTMARKDSRLSHTRQR*TTRGG-YLG*RKGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWIK-------DVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFD--GLKLHEPDGLLDAWFHE--DRTMNVGTNGRNS-NGPPERVEVEDGFFALRKRLVTHYTCRVENN-EVAWL 1274 T + L M+ YD +G PG A + +H G+ P + + T K+ + + Q G L +G GA NDK I+R++K V + Y YKL +DG + EK YL++D YH+WR+L+ P+K R +L + K DVEC+ GILKGRFRI KL I F + +DNV TCCILH++LHSFD G EP+ A H DR N + S +G E VEVE GF ALR +LVT++ R E ++ WL Sbjct: 135 TGEDLRKVMEQYDRIGFPG--AVGSTDVTHIYWGMCPYNQARIYT--GKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 150 bits (380), Expect = 4.520e-39 Identity = 76/204 (37.25%), Postives = 109/204 (53.43%), Query Frame = 3 Query: 705 GMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWIK-------DVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPD-------GLLDAWFHEDRTMNVGTNGRNSNGPPERVEVEDGFFALRKRLVTHYTCRVENNEVAWL 1274 G G+ NDK I+R++ V + E Y + + + DG K YL++D YH+W +L+ P+K + +LA+ K DVECF GI+KG FRILKL I + + +DNV TCCILH++LHS+D E + GL +AW H + S+ E VEVE GF RK+L+ + R N++AWL Sbjct: 37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 156 bits (395), Expect = 6.680e-39 Identity = 90/205 (43.90%), Postives = 115/205 (56.10%), Query Frame = 2 Query: 116 RRVYARPLYSEWAWGTVLQS------PDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGV--RYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700 RRVY R Y+ W LQ + DP R AR FR FR+PY F +EL+ +V++ WFP G GR +PV+LKVLA QIL RGN F I + IS A + FH F + FA +++ E I L G + + V +Y G +GA GSTDVTHI WG P R Y GKEG+PT+AY+ TVDH+ RV +T Sbjct: 77 RRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPT--GKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTG---DYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVT 276
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 154 bits (388), Expect = 7.590e-39 Identity = 89/198 (44.95%), Postives = 111/198 (56.06%), Query Frame = 2 Query: 110 R*RRVYARPLYSEWAWGTVLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG-GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700 R RRV R + AW LQ DL D A+ FR RFR+PY F EL+K+ + +WF G R +P+ELKVL G+GN FD + QL +SESIAQ+ FH FC+ A ++F E I L G G+ + G TGA GSTDVTHI P R + GKEGFPT+AYE TVDH+GR +T Sbjct: 61 RTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSP--GEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVT 250
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 141 bits (356), Expect = 2.030e-35 Identity = 78/225 (34.67%), Postives = 116/225 (51.56%), Query Frame = 3 Query: 681 GGYLG*RKGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWI-------KDVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPD-------GLLDAWFHEDRT--MNVGTNG-----------RNSNGPPERVEVEDGFFALRKRLVTHYTCRVENNEVAWL 1274 G L G GA NDK I+R++ V + Y YKLR +G E+ + +LI+D YH W +L+ P+K + ++ A+ KDVECF GILKGRFRILKL + + + +DN+ TCCILH++LH+FDGL + + + G DAW H+ T +VG+ G G R E L+++L+ + R + N++ WL Sbjct: 29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 145 bits (367), Expect = 3.630e-35 Identity = 83/190 (43.68%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 143 SEWAWGTVLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGV-RYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703 S AW VL+ DL DP A+ FR FR+PY F L L+++V++ WF + + GR PVE KVLA ILGRGN F I L +S Q FH FC+ FA +++ E I L D + +Y G GA+GSTDVTHI W P R Y GKEG PT+ Y+ TV+H+GRV +TE Sbjct: 61 STCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAY--GRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTE 248
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE) HSP 1 Score: 142 bits (358), Expect = 6.330e-34 Identity = 76/205 (37.07%), Postives = 116/205 (56.59%), Query Frame = 3 Query: 702 KGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWI-------KDVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPDGLLDAWFHEDRTM--NVGTNGRNSNGPPER---VEVEDGFFALRKRLVTHYTCRVENNEVAWLRS 1280 +G GA+NDK I++F+K AV G Y+ + Y L+ +DG + EK +LI+DG YH W+ L P + + + E + KD EC G++KGRFRI K+ ++R+ ++DN+ TC ILH++L ++DG++L EPD W D + N+ + P VE +DGF ALR++LVT++ R V W RS Sbjct: 253 RGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDC---DWAGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE) HSP 1 Score: 139 bits (351), Expect = 3.810e-33 Identity = 82/204 (40.20%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 116 RRVYARPLYSEWAWGTVLQSPDLTD------PNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703 R RP YS AWG L + + P+ R+A++FR FR+P++F + +V+ FP V GR VP+ELKVL Q+LGRGN F + QL L+S A+ +FH FC F+ L+H+ + L G G YG G GAV S D THI+W P T + GKEG+ TL YEA+ DHSGR+ T+ Sbjct: 33 RETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTV--FPTATRDV--AGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAG-EYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTK 231
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.700e-32 Identity = 79/183 (43.17%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 164 VLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG---GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703 +L+ DL D A+ R FR+PY L L+ +V+ WF VG PVE KVLA ILGRGN F I Q+ +S Q FH FC+ FA +++ E I L D ++ G TGAVGS DVTHIAW P R Y GKEGFPT+AY+ TVDH+GR +TE Sbjct: 26 LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFST--AVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTE 206 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11910.1226.1 >prot_H-paniculata_contig11910.1226.1 ID=prot_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp MAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIback to top mRNA from alignment at H-paniculata_contig11910:3030..6100- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11910.1226.1 ID=mRNA_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3071bp|location=Sequence derived from alignment at H-paniculata_contig11910:3030..6100- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11910:3030..6100- >mRNA_H-paniculata_contig11910.1226.1 ID=mRNA_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig11910:3030..6100- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |