mRNA_H-paniculata_contig11910.1226.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig11910.1226.1
Unique NamemRNA_H-paniculata_contig11910.1226.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 4.970e-43
Identity = 95/199 (47.74%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  116 RRVYARPLYSEWAWGTVL---QSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCP-RSHDEGVRYGGITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700
            RRVY R  Y++  W   L   +    TD   R+AR FR  FR+PY F + L+++V++  WFP   G   V GR  VPVELKVLA  QIL RGN F  I  +  IS     S FH FCK FA +L+ E + L  G   R   E     G  GAVGSTDVTHI WG  P    R+Y GKEG PT+A++ TVDHSGRV  +T
Sbjct:   96 RRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPT--GESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVT 292          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.190e-41
Identity = 106/275 (38.55%), Postives = 145/275 (52.73%), Query Frame = 3
Query:  501 TADALAATMKAYDTVGSPGQ*ARLMSPTSH---GVAPRHYIPVSTMARKDSRLSHTRQR*TTRGG-YLG*RKGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWIK-------DVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFD--GLKLHEPDGLLDAWFHE--DRTMNVGTNGRNS-NGPPERVEVEDGFFALRKRLVTHYTCRVENN-EVAWL 1274
            T + L   M+ YD +G PG  A   +  +H   G+ P +   + T   K+ + +   Q      G  L   +G  GA NDK I+R++K V  +     Y    YKL  +DG +  EK  YL++D  YH+WR+L+ P+K    R +L + K       DVEC+ GILKGRFRI KL I F +   +DNV  TCCILH++LHSFD  G    EP+    A  H   DR  N   +   S +G  E VEVE GF ALR +LVT++  R E   ++ WL
Sbjct:  135 TGEDLRKVMEQYDRIGFPG--AVGSTDVTHIYWGMCPYNQARIYT--GKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQHEAVEVETGFGALRSKLVTNFVYRREKKRDIVWL 405          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 4.520e-39
Identity = 76/204 (37.25%), Postives = 109/204 (53.43%), Query Frame = 3
Query:  705 GMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWIK-------DVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPD-------GLLDAWFHEDRTMNVGTNGRNSNGPPERVEVEDGFFALRKRLVTHYTCRVENNEVAWL 1274
            G  G+ NDK I+R++  V  + E   Y    + + + DG     K  YL++D  YH+W +L+ P+K    + +LA+ K       DVECF GI+KG FRILKL I + +   +DNV  TCCILH++LHS+D     E +       GL +AW H           + S+   E VEVE GF   RK+L+  +  R   N++AWL
Sbjct:   37 GFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTRRKQLIASFVYRKSKNDIAWL 240          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 6.680e-39
Identity = 90/205 (43.90%), Postives = 115/205 (56.10%), Query Frame = 2
Query:  116 RRVYARPLYSEWAWGTVLQS------PDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGV--RYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700
            RRVY R  Y+   W   LQ         + DP  R AR FR  FR+PY F +EL+ +V++  WFP   G     GR  +PV+LKVLA  QIL RGN F  I  +  IS   A + FH F + FA +++ E I L  G    + + V  +Y   G +GA GSTDVTHI WG  P    R Y GKEG+PT+AY+ TVDH+ RV  +T
Sbjct:   77 RRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPT--GKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTG---DYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVT 276          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 7.590e-39
Identity = 89/198 (44.95%), Postives = 111/198 (56.06%), Query Frame = 2
Query:  110 R*RRVYARPLYSEWAWGTVLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG-GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMT 700
            R RRV  R  +   AW   LQ  DL D     A+ FR RFR+PY F  EL+K+ +  +WF    G      R  +P+ELKVL      G+GN FD + QL  +SESIAQ+ FH FC+  A ++F E I L  G       G+ +  G TGA GSTDVTHI     P    R + GKEGFPT+AYE TVDH+GR   +T
Sbjct:   61 RTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSP--GEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVT 250          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.030e-35
Identity = 78/225 (34.67%), Postives = 116/225 (51.56%), Query Frame = 3
Query:  681 GGYLG*RKGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWI-------KDVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPD-------GLLDAWFHEDRT--MNVGTNG-----------RNSNGPPERVEVEDGFFALRKRLVTHYTCRVENNEVAWL 1274
            G  L    G  GA NDK I+R++  V  +     Y    YKLR  +G E+  +  +LI+D  YH W +L+ P+K   + ++ A+        KDVECF GILKGRFRILKL + + +   +DN+  TCCILH++LH+FDGL + + +       G  DAW H+  T   +VG+ G               G   R E       L+++L+  +  R + N++ WL
Sbjct:   29 GRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWL 253          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.630e-35
Identity = 83/190 (43.68%), Postives = 106/190 (55.79%), Query Frame = 2
Query:  143 SEWAWGTVLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGV-RYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703
            S  AW  VL+  DL DP    A+ FR  FR+PY F L L+++V++  WF   +   +  GR   PVE KVLA   ILGRGN F  I  L  +S    Q  FH FC+ FA +++ E I L        D  + +Y   G  GA+GSTDVTHI W   P    R Y GKEG PT+ Y+ TV+H+GRV  +TE
Sbjct:   61 STCAWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAY--GRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTE 248          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5K8I3_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8I3_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 6.330e-34
Identity = 76/205 (37.07%), Postives = 116/205 (56.59%), Query Frame = 3
Query:  702 KGMAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLIIDGEYHRWRSLVYPAKEAATREELAWI-------KDVECFSGILKGRFRILKLPIIFRESAQVDNVVLTCCILHDILHSFDGLKLHEPDGLLDAWFHEDRTM--NVGTNGRNSNGPPER---VEVEDGFFALRKRLVTHYTCRVENNEVAWLRS 1280
            +G  GA+NDK I++F+K   AV  G  Y+ + Y L+ +DG +  EK  +LI+DG YH W+ L  P +  + + E  +        KD EC  G++KGRFRI K+  ++R+  ++DN+  TC ILH++L ++DG++L EPD     W   D  +  N+       + P      VE +DGF ALR++LVT++  R     V W RS
Sbjct:  253 RGFPGAQNDKTIIKFDKFAMAVRNGW-YKDVEYTLKGEDGADIKEKGPWLIVDGGYHNWKQLQSPIRAPSNKAESGFKRQLESVRKDSECCFGVVKGRFRICKMQFLYRKKERIDNIFFTCIILHNMLLAYDGIELLEPDC---DWAGADGDLDKNIEHPVVRMSAPTHEDAVVECDDGFDALRQKLVTNFAYRWGQGTVGWKRS 453          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5JV45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV45_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 3.810e-33
Identity = 82/204 (40.20%), Postives = 110/204 (53.92%), Query Frame = 2
Query:  116 RRVYARPLYSEWAWGTVLQSPDLTD------PNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG--GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703
            R    RP YS  AWG  L + +         P+ R+A++FR  FR+P++F    + +V+    FP     V   GR  VP+ELKVL   Q+LGRGN F  + QL L+S   A+ +FH FC  F+  L+H+ + L  G       G  YG  G  GAV S D THI+W   P   T  + GKEG+ TL YEA+ DHSGR+   T+
Sbjct:   33 RETRERPDYSSSAWGVRLANLESLRIAGRLVPSSREAKAFRSDFRVPHEFFRHFVDLVRTV--FPTATRDV--AGRQCVPLELKVLGVLQVLGRGNCFADVAQLSLMSRQTAEKSFHRFCDCFSSGLWHQWVTLPEGEVLKKVAG-EYGDMGCPGAVASVDCTHISWPACPFSETNTHKGKEGYTTLVYEASCDHSGRILSSTK 231          
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 138 bits (347), Expect = 1.700e-32
Identity = 79/183 (43.17%), Postives = 98/183 (53.55%), Query Frame = 2
Query:  164 VLQSPDLTDPNRRDARSFRRRFRIPYDFLLELMKVVQEGQWFPKREGHVHVVGR*MVPVELKVLASFQILGRGNSFDVIRQLCLISESIAQSAFHIFCKRFAEDLFHE*IKLYRGCPRSHDEGVRYG---GITGAVGSTDVTHIAWGCTPALHTRLYNGKEGFPTLAYEATVDHSGRVFGMTE 703
            +L+  DL D     A+  R  FR+PY   L L+ +V+   WF         VG    PVE KVLA   ILGRGN F  I Q+  +S    Q  FH FC+ FA +++ E I L        D  ++     G TGAVGS DVTHIAW   P    R Y GKEGFPT+AY+ TVDH+GR   +TE
Sbjct:   26 LLEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFST--AVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTE 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11910.1226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPH7_9PHAE4.970e-4347.74Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.190e-4138.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE4.520e-3937.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE6.680e-3943.90Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE7.590e-3944.95DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JQM6_9PHAE2.030e-3534.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE3.630e-3543.68Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8I3_9PHAE6.330e-3437.07Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV45_9PHAE3.810e-3340.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE1.700e-3243.17DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11910contigH-paniculata_contig11910:3030..6100 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue2.7e-23
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1389
Cds size591
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11910.1226.1prot_H-paniculata_contig11910.1226.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig11910 3121..4315 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928908.1887279-UTR-H-paniculata_contig11910:3029..31201622928908.1887279-UTR-H-paniculata_contig11910:3029..3120Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 3030..3120 -
1691480662.9521127-UTR-H-paniculata_contig11910:3029..31201691480662.9521127-UTR-H-paniculata_contig11910:3029..3120Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 3030..3120 -
1622928908.223511-UTR-H-paniculata_contig11910:4315..46731622928908.223511-UTR-H-paniculata_contig11910:4315..4673Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 4316..4673 -
1691480662.9815376-UTR-H-paniculata_contig11910:4315..46731691480662.9815376-UTR-H-paniculata_contig11910:4315..4673Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 4316..4673 -
1622928908.2342994-UTR-H-paniculata_contig11910:5751..61001622928908.2342994-UTR-H-paniculata_contig11910:5751..6100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 5752..6100 -
1691480662.9912322-UTR-H-paniculata_contig11910:5751..61001691480662.9912322-UTR-H-paniculata_contig11910:5751..6100Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig11910 5752..6100 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928908.2001624-CDS-H-paniculata_contig11910:3120..35431622928908.2001624-CDS-H-paniculata_contig11910:3120..3543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11910 3121..3543 -
1691480662.9629967-CDS-H-paniculata_contig11910:3120..35431691480662.9629967-CDS-H-paniculata_contig11910:3120..3543Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11910 3121..3543 -
1622928908.2132556-CDS-H-paniculata_contig11910:4147..43151622928908.2132556-CDS-H-paniculata_contig11910:4147..4315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11910 4148..4315 -
1691480662.9718122-CDS-H-paniculata_contig11910:4147..43151691480662.9718122-CDS-H-paniculata_contig11910:4147..4315Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig11910 4148..4315 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig11910.1226.1

>prot_H-paniculata_contig11910.1226.1 ID=prot_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=197bp
MAGAENDKCIVRFEKTVQAVSEGEPYRSMAYKLRDKDGVEQVEKSIYLII
DGEYHRWRSLVYPAKEAATREELAWIKDVECFSGILKGRFRILKLPIIFR
ESAQVDNVVLTCCILHDILHSFDGLKLHEPDGLLDAWFHEDRTMNVGTNG
RNSNGPPERVEVEDGFFALRKRLVTHYTCRVENNEVAWLRSQSGQK*
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mRNA from alignment at H-paniculata_contig11910:3030..6100-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig11910.1226.1 ID=mRNA_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3071bp|location=Sequence derived from alignment at H-paniculata_contig11910:3030..6100- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAATTTCACAGAAAAAAGCTGCCTTGACAGTTTTATCACAGTTGCAAGAC ACTTCAGGGTGTCCATATTTCATCTTGAAGCAATCTCCTCGTGATGATCA TGATGCTGAAGATGAAGAAGGGTGTATGCTCGGCCGCTGTACAGTGAATG GGCGTGGGGAACGGTGCTGCAGTCCCCCGATCTCACGGACCCCAATAGGA GAGACGCCCGCAGCTTCAGGAGGCGCTTTCGTATACCCTATGATTTCTTG TTGGAGTTGATGAAAGTGGTGCAAGAAGGACAATGGTTTCCGAAGAGAGA GGGGCACGTGCATGTCGTCGGTCGCTGAATGGTTCCTGTAGAGCTGAAGG TAAGCGGCACGACAACAGGCGATGTCGCCACTGTGCATGACAGAGATCGT CCTCCAATTTACAGTTCAGTAGAACTGTAATGATGCGAAGCTAACTTGTA TAGTACATTACTGTAGTGTATGGCCTCATTACGGTATTGTATGGCCTCAT TCCTGTGTAGTACAACCCGTACTGTCCTCGAACATACCGTGGTACAGGAA GTATGACCCTGCGAAGCTGTAGTACTTTGAATAATATGGTGGTGCTGACT AATAAAAATAACCTTGTTTTCAACGAAACTTTTATCACCCAAGGCTGCCG AATTAGCCAGGGTTCGGGAGATACAAATTGAAGCACTTCACCGTCTCGAC AACATGCCGTTGGAAAACTTAAAACTTCAAATTGGGCAACATTCAGTTAT CCGACAAGTTAAGGTTACCCGTTAAAAAAATGTGGTATTTATCAGTGGCC GTTGTAAATACTGTATTGTCTCTTTTTTCGTGTCGAGAAGATGTGCTGCC CACACCTGTCGAGAATCGCTGTTTTCGTCATTTGCTTTGCTAGGCAAGGA ATATCCAGACCGCCCAATTGACGCCATGAGCTTGTACCTTAAGCATGACG CGCGATGCAATACATGATCTCCCGAATTGTTTGTTGTTCGATTCTGCTGT GGGTGCATTAATTAGATGATTTTGTTTGTTTATTGGTAAATTCGATGGGT TATCCTGTTCAATTTCCCTCCTGTTGTGGTCCTTCTCTCTCACGAGGTTA CATTGCCAGAGAGTGAATTACGAGTTGTACACAACCGTCACACACCGCGG AAGAAAATACCAGGATGACATTTGCGGTGGGTTCTATTCCTTAGGGGTGT CTTAGGCCCATTAGAACAGTGCCACCTTGCCTTGCTGAGGGCGATTGGTT TTGGATAAGCCGAGGTGCGTCGTTGCAAGTATTCGTTTTCAGCGAGGCCA TCGCACTGGGAACATGAGCGTCATGATCAATTTTCTCCTTAATAATATTT CGCTATCCCAGCCACCGTCAGTACGACCAAGTGTTTCATGCGATTCCCTC ACCCCTTCCGTCGCGGCTGTAACACAGGTTCTGGCGAGCTTCCAGATTCT GGGGAGAGGGAATAGCTTCGATGTTATCCGCCAACTCTGCTTGATTAGCG AGTCGATTGCCCAAAGTGCGTTCCACATATTTTGCAAGCGTTTCGCTGAA GATCTTTTTCATGAGTAGATTAAACTCTACCGCGGATGCCCTCGCAGCCA CGATGAAGGCGTACGATACGGTGGGATCACCGGGGCAGTAGGCTCGACTG ATGTCACCCACATCGCATGGGGTTGCACCCCGGCATTACATACCCGTCTC TACAATGGCAAGGAAGGATTCCCGACTCTCGCATACGAGGCAACGGTAGA CCACTCGGGGCGGGTATTTGGGATGACGGAAAGGAATGGCCGGAGCAGAG AACGATAAATGTATCGTTCGTTTCGAGAAGACAGTTCAAGCGGTCTCGGA GGGTGAGCCGTACAGGTCGATGGCTTACAAGCTCCGCGATAAGGACGGCG TGGAACAGGTGGAGAAGAGTATTTACCTCATCATCGACGGAGAATATCAC CGGGTGAGTCACCTGTTGTGCGATGGCCATTGCTGCTGCACCACTCCACA GAAATGCGTTGTATATTTTACGTTATGCGGCGTCAATTTCTTCTTTTCTG ATAAGCATACCCCGTTTAGTGTTGTCTATCAACCACACCTCACCTACAAT GTACGAGGTTGTTGATCCCAACGTAAACGGCTCCTCGAGGTCCCACTTTG TGAGCCGCAGCTCTAGACTCACCGGACATTTGTTTCAAATATTACCGCCA GACGAGATGCAAACTATGAGACAGCAAGCTTCCTTGACATAAATCGCAGC TACGCGAAATCCGCAGGTCGTGCCACGTGACGTATCGTGTTTAAAGCGCA GGCTATGCCACCATTGACAAAGACTTTGCTAGGATGATAAGGCGTTCCTG TGTCTTCTTTTGTGGTTGGTTTCAACCGCCGGTGTTGTTGATGTCGTCTT CAGCTTCAATTTCCTCTGTACCGCTGAGTGATCACTGATCAAGGCTGAGA TAGATTGTATGAGCCGGGCGTTTTTCATTTCTGACACGGTTGGCCCGACG CGGCATAAGAACAACGTGTATCGGCCACTATTTTCTCGTTTCTCCTCTTG TTTGCAGTGGAGGAGTCTAGTGTACCCGGCAAAAGAAGCTGCAACTCGAG AGGAATTAGCGTGGATTAAGGACGTGGAATGCTTCTCCGGCATTCTCAAG GGCCGCTTCAGAATTTTGAAGCTGCCCATCATTTTCAGGGAGTCCGCTCA GGTAGACAACGTGGTCTTGACATGCTGTATCCTTCACGATATACTACATT CGTTCGACGGACTGAAGTTGCACGAGCCGGATGGCCTCCTTGACGCGTGG TTTCACGAAGATCGCACAATGAACGTTGGCACGAACGGTCGCAATTCAAA CGGGCCGCCAGAGCGCGTCGAAGTCGAGGACGGTTTTTTCGCCCTGAGAA AGAGGCTAGTTACGCACTACACATGCAGGGTAGAAAACAACGAAGTGGCT TGGCTGCGGTCGCAATCTGGTCAGAAATGATTTGAGCATGTAGATCGGGC ATGGTGCTGTATGGATTTTCATGTGTCGTGACGATTTATGTTGTGACGTT TGAGGGTTTGGTTAGCAGGAT
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Coding sequence (CDS) from alignment at H-paniculata_contig11910:3030..6100-

>mRNA_H-paniculata_contig11910.1226.1 ID=mRNA_H-paniculata_contig11910.1226.1|Name=mRNA_H-paniculata_contig11910.1226.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1182bp|location=Sequence derived from alignment at H-paniculata_contig11910:3030..6100- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCGGAGCAGAGAACGATAAATGTATCGTTCGTTTCGAGAAGACAGT
TCAAGCGGTCTCGGAGGGTGAGCCGTACAGGTCGATGGCTTACAAGCTCC
GCGATAAGGACGGCGTGGAACAGGTGGAGAAGAGTATTTACCTCATCATC
GACGGAGAATATCACCGGATGGCCGGAGCAGAGAACGATAAATGTATCGT
TCGTTTCGAGAAGACAGTTCAAGCGGTCTCGGAGGGTGAGCCGTACAGGT
CGATGGCTTACAAGCTCCGCGATAAGGACGGCGTGGAACAGGTGGAGAAG
AGTATTTACCTCATCATCGACGGAGAATATCACCGGTGGAGGAGTCTAGT
GTACCCGGCAAAAGAAGCTGCAACTCGAGAGGAATTAGCGTGGATTAAGG
ACGTGGAATGCTTCTCCGGCATTCTCAAGGGCCGCTTCAGAATTTTGAAG
CTGCCCATCATTTTCAGGGAGTCCGCTCAGGTAGACAACGTGGTCTTGAC
ATGCTGTATCCTTCACGATATACTACATTCGTTCGACGGACTGAAGTTGC
ACGAGCCGGATGGCCTCCTTGACGCGTGGTTTCACGAAGATCGCACAATG
AACGTTGGCACGAACGGTCGCAATTCAAACGGGCCGCCAGAGCGCGTCGA
AGTCGAGGACGGTTTTTTCGCCCTGAGAAAGAGGCTAGTTACGCACTACA
CATGCAGGGTAGAAAACAACGAAGTGGCTTGGCTGCGGTCGCAATCTGGT
CAGAAATGATGGAGGAGTCTAGTGTACCCGGCAAAAGAAGCTGCAACTCG
AGAGGAATTAGCGTGGATTAAGGACGTGGAATGCTTCTCCGGCATTCTCA
AGGGCCGCTTCAGAATTTTGAAGCTGCCCATCATTTTCAGGGAGTCCGCT
CAGGTAGACAACGTGGTCTTGACATGCTGTATCCTTCACGATATACTACA
TTCGTTCGACGGACTGAAGTTGCACGAGCCGGATGGCCTCCTTGACGCGT
GGTTTCACGAAGATCGCACAATGAACGTTGGCACGAACGGTCGCAATTCA
AACGGGCCGCCAGAGCGCGTCGAAGTCGAGGACGGTTTTTTCGCCCTGAG
AAAGAGGCTAGTTACGCACTACACATGCAGGGTAGAAAACAACGAAGTGG
CTTGGCTGCGGTCGCAATCTGGTCAGAAATGA
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