prot_H-paniculata_contig49892.12200.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig49892.12200.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME) HSP 1 Score: 56.6 bits (135), Expect = 4.270e-7 Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 2 EIWICDNGATKHMTHNSDFLFSYQEC-DGHVRLADGNRLPIKGVGMLLLQFRCGSEVVLMKLTQVAFIPLLNHHLLSLG 79
++WI D+GA++HMTH S+++ + Q D HV L DG + + G G + +Q + + L V ++P LN +L S+G
Sbjct: 286 DVWILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
BLAST of mRNA_H-paniculata_contig49892.12200.1 vs. uniprot
Match: Q9SJT2_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SJT2_ARATH) HSP 1 Score: 52.8 bits (125), Expect = 1.020e-5 Identity = 28/95 (29.47%), Postives = 49/95 (51.58%), Query Frame = 0
Query: 4 WICDNGATKHMTHNSDFLFSYQE-CDGHVRLADGNRLPIKGVGMLLLQFRCGSEVVLMKLTQVAFIPLLNHHLLSLGKFADFGHEYRCSREGLRI 97
W+ D G + HMT+ ++ E G VR+ + ++G+G + ++ G V +LT V +IP ++ +LLSLG F G+ ++ L I
Sbjct: 287 WVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVV---RLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSI 378
BLAST of mRNA_H-paniculata_contig49892.12200.1 vs. uniprot
Match: A0A225WMA1_9STRA (CCHC-type domain-containing protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WMA1_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 1.350e-5 Identity = 28/86 (32.56%), Postives = 49/86 (56.98%), Query Frame = 0
Query: 2 EIWICDNGATKHMTHNSDFLFSYQECDGHVRLADGNRLPIKGVGMLLLQFR-CGSEVVLMKLTQVAFIPLLNHHLLSLGKFADFGH 86
+IWI DNG+++H+ +++ +L +ECD +G L I G + L+ CG E V+ +L+ V F + H+L+S G+ G+
Sbjct: 292 DIWILDNGSSRHLVNDASYLDDVEECDDQCVQPNGEPLAISMKGSVTLRVAACGVEQVV-RLSNVYFAKNVVHNLISYGQLDKVGY 376
BLAST of mRNA_H-paniculata_contig49892.12200.1 vs. uniprot
Match: A0A445G8E4_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445G8E4_GLYSO) HSP 1 Score: 50.4 bits (119), Expect = 6.620e-5 Identity = 24/93 (25.81%), Postives = 46/93 (49.46%), Query Frame = 0
Query: 4 WICDNGATKHMTHNSDFLFSYQEC-DGHVRLADGNRLPIKGVGMLLLQFRCGSEVVLMKLTQVAFIPLLNHHLLSLGKFADFGHEYRCSREGL 95
W D GA+ HM + E G V D +++P+KG+G +L++ + GS + + V ++P + + +LSLG+ + ++ L
Sbjct: 315 WYLDTGASNHMCGDQSMFMEINEAATGDVSFGDDSKIPVKGIGKILIRLKNGSHQFI---SNVYYVPNMKNIILSLGQLLEKDYDIHLKEHSL 404 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49892.12200.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig49892.12200.1 ID=prot_H-paniculata_contig49892.12200.1|Name=mRNA_H-paniculata_contig49892.12200.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bpback to top |