mRNA_H-paniculata_contig4986.12193.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A6H5JI39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI39_9PHAE) HSP 1 Score: 116 bits (290), Expect = 1.950e-28 Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 34 AWPNLESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHRWE 228
A LESRA DFLPHAFLLYPDRDYCVLT+PSVGAESV LR+FSPVPA+PG AFNHVLY+ HR E
Sbjct: 15 AGARLESRAADFLPHAFLLYPDRDYCVLTLPSVGAESVLLRHFSPVPARPGSAFNHVLYVMHRLE 79
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: D7G5V1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5V1_ECTSI) HSP 1 Score: 115 bits (287), Expect = 4.970e-28 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 1
Query: 43 NLESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHRWEWGVN 240
LESRA DFLPHAFLLYPDRDYCVLT+PSVGAESV LR+FSPVPA+PG AFNHVLY+ H GV+
Sbjct: 241 RLESRAADFLPHAFLLYPDRDYCVLTLPSVGAESVLLRHFSPVPARPGSAFNHVLYVMHSHRAGVS 306
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A835ZCT4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT4_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 7.320e-16 Identity = 38/71 (53.52%), Postives = 45/71 (63.38%), Query Frame = 1
Query: 43 NLESRAVDFLPHAFLLYPDRDYCVLTVPSV-----------GAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
L+SRAVDFLPH F ++PDRDYCVLTVP GA + LR+F+P AKP AF H LY+ HR
Sbjct: 657 QLQSRAVDFLPHMFRMFPDRDYCVLTVPCAPARGVMGGPVRGASAPLLRHFAPARAKPDSAFGHALYVMHR 727
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A0L0DNW5_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DNW5_THETB) HSP 1 Score: 68.2 bits (165), Expect = 1.570e-11 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
ESR+VDFLP AF L+PDR+YC+LT+P AE LR F V K F H+LYI HR
Sbjct: 455 ESRSVDFLPLAFELFPDREYCILTLPHEVAEFPLLRAFGTVKPKSISTFPHMLYILHR 512
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: UPI00148C9368 (cilia- and flagella-associated protein 61 n=2 Tax=Hippoglossus TaxID=8266 RepID=UPI00148C9368) HSP 1 Score: 67.0 bits (162), Expect = 4.000e-11 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
E R+VDF+P+ F L+P RD+CV TVPS+ AE L++F VP + + H LY++HR
Sbjct: 319 EMRSVDFIPYVFKLFPHRDFCVFTVPSLSAECPLLQSFLRVPPRANSSLVHELYVSHR 376
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: UPI00106C2AAB (LOW QUALITY PROTEIN: cilia- and flagella-associated protein 61-like n=2 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106C2AAB) HSP 1 Score: 66.2 bits (160), Expect = 7.460e-11 Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHRW 225
E+R++DFLP AF L+PD+DYCV+T+P + E + F+ V K +H LY+ HRW
Sbjct: 299 EARSMDFLPAAFKLFPDKDYCVITMPHIVNEFPLVHEFTRVTPKVDATISHELYVFHRW 357
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A4W3K2E6_CALMI (Uncharacterized protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3K2E6_CALMI) HSP 1 Score: 63.9 bits (154), Expect = 8.950e-11 Identity = 30/58 (51.72%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
ESR+ DFLP+ F LYPDRDYCV+TVP V E L+ F + H LYI HR
Sbjct: 114 ESRSQDFLPYIFDLYPDRDYCVITVPHVVPEFPLLKEFVRITPYSNTTLPHELYIAHR 171
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A0P7UGL8_SCLFO (DUF4821 domain-containing protein n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7UGL8_SCLFO) HSP 1 Score: 65.1 bits (157), Expect = 1.870e-10 Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
E+R+VDFLP+ F L+PDRD+CV++VP + E L+ F V +P + H LYI HR
Sbjct: 364 ETRSVDFLPYMFALFPDRDFCVISVPMMVPEFPLLKRFLRVTPRPASSLPHELYICHR 421
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: UPI001A99918D (cilia- and flagella-associated protein 61 isoform X1 n=3 Tax=Xiphias gladius TaxID=8245 RepID=UPI001A99918D) HSP 1 Score: 65.1 bits (157), Expect = 1.910e-10 Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 43 NLESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
N E R+VDF+P+ F L+PD D+CV+TVP++ E L++F VP + + H LY+ HR
Sbjct: 326 NYEMRSVDFIPYVFKLFPDLDFCVMTVPTLSPEFPLLQSFLRVPPRATRSLPHELYVFHR 385
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Match: A0A7S0MTN0_9CHLO (Hypothetical protein n=2 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MTN0_9CHLO) HSP 1 Score: 64.3 bits (155), Expect = 3.510e-10 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 49 ESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFLRNFSPVPAKPGLAFNHVLYITHR 222
++++ D L AF +P++DYC+LT+P E V LR FS VPA P F VLY+THR
Sbjct: 47 DTQSEDLLAPAFEAFPEKDYCLLTIPHEATEPVLLRTFSRVPANPTSMFPEVLYLTHR 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4986.12193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4986.12193.1 >prot_H-paniculata_contig4986.12193.1 ID=prot_H-paniculata_contig4986.12193.1|Name=mRNA_H-paniculata_contig4986.12193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=81bp MYIYRVLNVTLAWPNLESRAVDFLPHAFLLYPDRDYCVLTVPSVGAESVFback to top mRNA from alignment at H-paniculata_contig4986:695..937- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4986.12193.1 ID=mRNA_H-paniculata_contig4986.12193.1|Name=mRNA_H-paniculata_contig4986.12193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at H-paniculata_contig4986:695..937- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4986:695..937- >mRNA_H-paniculata_contig4986.12193.1 ID=mRNA_H-paniculata_contig4986.12193.1|Name=mRNA_H-paniculata_contig4986.12193.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at H-paniculata_contig4986:695..937- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |