prot_H-paniculata_contig4982.12189.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig4982.12189.1
Unique Name	prot_H-paniculata_contig4982.12189.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	103

Homology

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 9.660e-44
Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 0

Query:    4 ELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQT 94
            ELSC++VLKWWK+W+SSYPLLARAARVVFGAPASAAVLE DF DAGR+MTSSRSTTDAKYVEM+LFLHGN+DLIPEDIP      P +  T
Sbjct:   31 ELSCDSVLKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPTAPSARLT 121

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 6.150e-41
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            L   LSCE+VLKWWK W  +YPLLAR ARVVFGAPASAAVLERDFS+AGRMMTSSRST D+KYVEM++FLHGN+DLIPEDI KL T+   +A+TK+PGRLA+P
Sbjct:  598 LAPGLSCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKL-TEA--AARTKIPGRLANP 697

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.070e-38
Identity = 76/103 (73.79%), Postives = 86/103 (83.50%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            L A L CE+VLKWWK W  +YPLLAR ARVV GA ASAAVLE DFS+AGRMMTSSRST D+KYVEM+LFLHGN+DLIPEDI KL T+    A+TK+PGRLA+P
Sbjct:  371 LAAGLRCEDVLKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKL-TEA--VARTKIPGRLANP 470

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 3.020e-38
Identity = 73/103 (70.87%), Postives = 81/103 (78.64%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            L  + SCE VL WWK+   SYPLLAR ARVVF APAS  V ERD   AGRMMTSSRST DAKYVEMVLFLHGNVDL+PE IP+LP DG +  QTK+PGRL++P
Sbjct:  640 LFGDTSCEGVLNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLSNP 742

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 3.970e-38
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            LT +LSCE VL+WWKKW   YPLLARAARVVFGAPASAAVLERDF+DA  MM SSRS  DAKYVEMVLFLHGN+DLIPE IP+L  +     Q K+PGRL++P
Sbjct:  538 LTDDLSCEGVLEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDE---DVQAKIPGRLSNP 637

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 6.840e-38
Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            L A L CE+VLKWWK W  +YPLLAR ARVVFGAPASAAVLE  FS+AGRM TSSRST D+ YVEM++FLHGN++LIPEDI KL       A+TK PGRLA+P
Sbjct:  134 LAARLRCEDVLKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEV---VARTKFPGRLANP 233

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5KGU9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGU9_9PHAE)

HSP 1 Score: 120 bits (300), Expect = 1.010e-32
Identity = 64/101 (63.37%), Postives = 72/101 (71.29%), Query Frame = 0

Query:    4 ELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTK-VPGRLAHP 103
            ELSCE+VLKWWK+W+SSYPLLARA RVVFGAPASAA                       YVEM+LFLHGN+DLIP+DIP LPTDGPDSA  K +PGRL +P
Sbjct:   31 ELSCESVLKWWKRWMSSYPLLARATRVVFGAPASAA-----------------------YVEMILFLHGNLDLIPDDIPALPTDGPDSATNKHMPGRLKNP 108

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 8.430e-32
Identity = 65/88 (73.86%), Postives = 74/88 (84.09%), Query Frame = 0

Query:   17 WVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAK-YVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            W   YPLLAR ARVVFGAPASAAVLERDFS+AGRMMTSSR T D+  YVEM+LFLHGN+DLIPEDI KL T+    A++K+PGRLA+P
Sbjct:    2 WAHVYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKL-TEA--VARSKIPGRLANP 86

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5KW12_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW12_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 5.040e-26
Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 0

Query:   20 SYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKY-VEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            +Y LL   ARVVFGAPASAA LERDFS+AGRMMTSSRS  D+KY VEM+LFLHGN+DLIPEDI  L T+    A+T  PGRLA+P
Sbjct:    5 AYLLLTGVARVVFGAPASAAALERDFSNAGRMMTSSRSAMDSKYYVEMILFLHGNLDLIPEDITTL-TEA--VARTMFPGRLANP 86

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BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Match: A0A6H5KEK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEK6_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 8.860e-22
Identity = 54/103 (52.43%), Postives = 63/103 (61.17%), Query Frame = 0

Query:    1 LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGRMMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRLAHP 103
            LT +L CE VLKWW+KW  SYPLLARAARV FGAPA+                      DAKYVEMVLFLHG +DL PE IP+L  +       K+PGRL++P
Sbjct:  337 LTDDLGCEGVLKWWEKWEGSYPLLARAARVDFGAPAAG---------------------DAKYVEMVLFLHGKLDLFPEQIPELRDE---DIHAKIPGRLSNP 415

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4982.12189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A6H5L5L6_9PHAE	9.660e-44	79.12	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JZ82_9PHAE	6.150e-41	75.73	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JNY1_9PHAE	1.070e-38	73.79	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LFP4_ECTSI	3.020e-38	70.87	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
D8LBK4_ECTSI	3.970e-38	72.82	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JML0_9PHAE	6.840e-38	69.90	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KGU9_9PHAE	1.010e-32	63.37	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KCJ3_9PHAE	8.430e-32	73.86	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KW12_9PHAE	5.040e-26	70.59	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KEK6_9PHAE	8.860e-22	52.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 8..73 e-value: 3.9E-14 score: 52.2
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 6..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4982	contig	H-paniculata_contig4982:191..499 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4982.12189.1	mRNA_H-paniculata_contig4982.12189.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig4982 191..499 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig4982.12189.1 ID=prot_H-paniculata_contig4982.12189.1|Name=mRNA_H-paniculata_contig4982.12189.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
LTAELSCENVLKWWKKWVSSYPLLARAARVVFGAPASAAVLERDFSDAGR
MMTSSRSTTDAKYVEMVLFLHGNVDLIPEDIPKLPTDGPDSAQTKVPGRL
AHP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf