prot_H-paniculata_contig4980.12184.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4980.12184.1
Unique Nameprot_H-paniculata_contig4980.12184.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length334
Homology
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BLAST of mRNA_H-paniculata_contig4980.12184.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.240e-19
Identity = 91/308 (29.55%), Postives = 124/308 (40.26%), Query Frame = 0 
Query:   22 DLRKHGHFGQLNVYCAIKLGEHEVGRTRDIKFDQHLVWERPEERFRLPLDDICGAPAA------LGTSTASPSKTAQSGHHGHGQKHRRPSASELTSNH-------IINAGKDESRVRTVSLGDEAIKGACV--------------HPPH--------VAPLTIEVWGKHVI--GRRHDFLGRATVPAENVQHPHGDVWLPLRGRLSPDPVAEGAYRDLNGALVAGSGSPVSVVRETRDRSWGGGLFKTLRLLPAKTASVENETFGNLPPTGSVHVWLGKVHRSSSGGREPGRGRVVLRVHAAANLRK 292
            DL  H  FG    +C +++G+ EV RTR +K +  LVWE PEERFR+ ++DI GA  A      + T+ A+ + T             R   S  T+ H          AG D       +LG +   GA V                PH         + LTI VW K  +  GRR   +G ATVP   + HP GD W+PL         A G  R+ +G     +   V       D +  G   K     PA              P G          R S+ G++PG G  +LR+H+A+ LRK
Sbjct: 4484 DLLAH-KFGDSKYFCVLEVGQREVDRTRQVKRNPELVWEAPEERFRVAIEDIKGAKPAPNSVGFVNTTNATGAATPAG---------ERDPPSLATARHGEQVTRLFAEAGGDGEGAGDATLGADLDGGAPVSVLSIPASALRRHSQQPHHGQEVAAGASSLTISVWSKGTVMGGRRDVLVGTATVPTRYIDHPPGDAWIPL--------AAGGDSRE-DGQAGGKAEHKVGXXXXXXDAAAVGTESKNPDATPA--------------PAGGTTT----ARRGSTSGQQPGEGYAILRIHSASGLRK 4754
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4980.12184.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEV4_ECTSI1.240e-1929.55C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 141..186
e-value: 0.0078
score: 16.5
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 13..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4980contigH-paniculata_contig4980:1727..4103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4980.12184.1mRNA_H-paniculata_contig4980.12184.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4980 1561..4103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4980.12184.1 ID=prot_H-paniculata_contig4980.12184.1|Name=mRNA_H-paniculata_contig4980.12184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=334bp
GQAASRIHEPEDLLISLRGVVDLRKHGHFGQLNVYCAIKLGEHEVGRTRD
IKFDQHLVWERPEERFRLPLDDICGAPAALGTSTASPSKTAQSGHHGHGQ
KHRRPSASELTSNHIINAGKDESRVRTVSLGDEAIKGACVHPPHVAPLTI
EVWGKHVIGRRHDFLGRATVPAENVQHPHGDVWLPLRGRLSPDPVAEGAY
RDLNGALVAGSGSPVSVVRETRDRSWGGGLFKTLRLLPAKTASVENETFG
NLPPTGSVHVWLGKVHRSSSGGREPGRGRVVLRVHAAANLRKRFPRAHQC
SYGYPSPARGSNIPTPCPYGWPRGRRDCHKRVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom